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1BLH
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STRUCTURE OF A PHOSPHONATE-INHIBITED BETA-LACTAMASE. AN ANALOG OF THE TETRAHEDRAL TRANSITION STATE(SLASH)INTERMEDIATE OF BETA-LACTAM HYDROLYSIS
分子名称: BETA-LACTAMASE, [[N-(BENZYLOXYCARBONYL)AMINO]METHYL]PHOSPHATE
著者Chen, C.C.H, Herzberg, O.
登録日1993-09-30
公開日1994-08-31
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure of a phosphonate-inhibited beta-lactamase. An analog of the tetrahedral transition state/intermediate of beta-lactam hydrolysis.
J.Mol.Biol., 234, 1993
2CEL
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ACTIVE-SITE MUTANT E212Q DETERMINED AT PH 6.0 WITH NO LIGAND BOUND IN THE ACTIVE SITE
分子名称: 1,4-BETA-D-GLUCAN CELLOBIOHYDROLASE I, 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION
著者Divne, C, Stahlberg, J, Jones, T.A.
登録日1996-08-24
公開日1997-03-12
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Activity studies and crystal structures of catalytically deficient mutants of cellobiohydrolase I from Trichoderma reesei.
J.Mol.Biol., 264, 1996
1MFN
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SOLUTION NMR STRUCTURE OF LINKED CELL ATTACHMENT MODULES OF MOUSE FIBRONECTIN CONTAINING THE RGD AND SYNERGY REGIONS, 20 STRUCTURES
分子名称: FIBRONECTIN
著者Copie, V, Tomita, Y, Akiyama, S.K, Aota, S, Yamada, K.M, Venable, R.M, Pastor, R.W, Krueger, S, Torchia, D.A.
登録日1998-01-27
公開日1998-04-29
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution structure and dynamics of linked cell attachment modules of mouse fibronectin containing the RGD and synergy regions: comparison with the human fibronectin crystal structure.
J.Mol.Biol., 277, 1998
7ZH5
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SARS CoV Spike protein, Open conformation
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein,Fibritin
著者Toelzer, C, Gupta, K, Yadav, S.K.N, Buzas, D, Borucu, U, Schaffitzel, C, Berger, I.
登録日2022-04-05
公開日2023-02-15
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献The free fatty acid-binding pocket is a conserved hallmark in pathogenic beta-coronavirus spike proteins from SARS-CoV to Omicron.
Sci Adv, 8, 2022
7ZH1
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SARS CoV Spike protein, Closed C3 conformation
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, LINOLEIC ACID, ...
著者Toelzer, C, Gupta, K, Yadav, S.K.N, Buzas, D, Borucu, U, Schaffitzel, C, Berger, I.
登録日2022-04-05
公開日2023-02-15
実験手法ELECTRON MICROSCOPY (2.48 Å)
主引用文献The free fatty acid-binding pocket is a conserved hallmark in pathogenic beta-coronavirus spike proteins from SARS-CoV to Omicron.
Sci Adv, 8, 2022
1H46
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The catalytic module of Cel7D from Phanerochaete chrysosporium as a chiral selector: Structural studies of its complex with the b-blocker (R)-propranolol
分子名称: (1E,2R)-1-(ISOPROPYLIMINO)-3-(1-NAPHTHYLOXY)PROPAN-2-OL, 2-acetamido-2-deoxy-beta-D-glucopyranose, EXOGLUCANASE I
著者Munoz, I.G, Mowbray, S.L, Stahlberg, J.
登録日2002-10-03
公開日2003-04-03
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.52 Å)
主引用文献The Catalytic Module of Cel7D from Phanerochaete Chrysosporium as a Chiral Selector: Structural Studies of its Complex with the Beta Blocker (R)-Propranolol
Acta Crystallogr.,Sect.D, 59, 2003
1OME
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BU of 1ome by Molmil
CRYSTAL STRUCTURE OF THE OMEGA LOOP DELETION MUTANT (RESIDUES 163-178 DELETED) OF BETA-LACTAMASE FROM STAPHYLOCOCCUS AUREUS PC1
分子名称: BETA-LACTAMASE, CHLORIDE ION
著者Banerjee, S, Pieper, U, Herzberg, O.
登録日1998-02-09
公開日1998-05-27
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Role of the omega-loop in the activity, substrate specificity, and structure of class A beta-lactamase.
Biochemistry, 37, 1998
1H79
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STRUCTURAL BASIS FOR ALLOSTERIC SUBSTRATE SPECIFICITY REGULATION IN CLASS III RIBONUCLEOTIDE REDUCTASES: NRDD IN COMPLEX WITH DTTP
分子名称: ANAEROBIC RIBONUCLEOTIDE-TRIPHOSPHATE REDUCTASE LARGE CHAIN, FE (II) ION, MAGNESIUM ION, ...
著者Larsson, K.-M, Andersson, J, Sjoeberg, B.-M, Nordlund, P, Logan, D.T.
登録日2001-07-04
公開日2002-03-28
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural Basis for Allosteric Substrate Specificty Regulation in Anaerobic Ribonucleotide Reductase
Structure, 9, 2001
1H78
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STRUCTURAL BASIS FOR ALLOSTERIC SUBSTRATE SPECIFICITY REGULATION IN CLASS III RIBONUCLEOTIDE REDUCTASES: NRDD IN COMPLEX WITH DCTP.
分子名称: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, ANAEROBIC RIBONUCLEOTIDE-TRIPHOSPHATE REDUCTASE LARGE CHAIN, MAGNESIUM ION
著者Larsson, K.-M, Andersson, J, Sjoeberg, B.-M, Nordlund, P, Logan, D.T.
登録日2001-07-04
公開日2002-07-04
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural Basis for Allosteric Substrate Specificty Regulation in Anaerobic Ribonucleotide Reductase
Structure, 9, 2001
1H7A
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Structural basis for allosteric substrate specificity regulation in class III ribonucleotide reductases: NRDD in complex with dATP
分子名称: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, ANAEROBIC RIBONUCLEOTIDE-TRIPHOSPHATE REDUCTASE LARGE CHAIN, FE (II) ION, ...
著者Larsson, K.-M, Andersson, J, Sjoeberg, B.-M, Nordlund, P, Logan, D.T.
登録日2001-07-04
公開日2002-03-28
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Structural Basis for Allosteric Substrate Specificty Regulation in Anaerobic Ribonucleotide Reductase
Structure, 9, 2001
1I4A
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CRYSTAL STRUCTURE OF PHOSPHORYLATION-MIMICKING MUTANT T6D OF ANNEXIN IV
分子名称: ANNEXIN IV, CALCIUM ION, SULFATE ION
著者Kaetzel, M.A, Mo, Y.D, Mealy, T.R, Campos, B, Bergsma-Schutter, W, Brisson, A, Dedman, J.R, Seaton, B.A.
登録日2001-02-20
公開日2001-04-25
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Phosphorylation mutants elucidate the mechanism of annexin IV-mediated membrane aggregation.
Biochemistry, 40, 2001
8OJP
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BU of 8ojp by Molmil
Human galectin 1 in complex with inhibitor
分子名称: (2~{R},3~{R},4~{S},5~{R},6~{R})-2-[3,5-bis(chloranyl)-4-fluoranyl-phenyl]sulfanyl-6-(hydroxymethyl)-4-[4-(1,3-thiazol-2-yl)-1,2,3-triazol-1-yl]oxane-3,5-diol, GLYCEROL, Galectin-1
著者Hakansson, M, Diehl, C, Nilsson, U.J, Zetterberg, F.R, Peterson, K.
登録日2023-03-24
公開日2024-06-12
実験手法X-RAY DIFFRACTION (1.71 Å)
主引用文献Discovery of Selective and Orally Available Galectin-1 Inhibitors.
J.Med.Chem., 66, 2023
1H7B
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Structural basis for allosteric substrate specificity regulation in class III ribonucleotide reductases, native NRDD
分子名称: ANAEROBIC RIBONUCLEOTIDE-TRIPHOSPHATE REDUCTASE LARGE CHAIN, PHOSPHATE ION
著者Larsson, K.-M, Andersson, J, Sjoeberg, B.-M, Nordlund, P, Logan, D.T.
登録日2001-07-04
公開日2002-03-28
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Structural Basis for Allosteric Substrate Specificty Regulation in Anaerobic Ribonucleotide Reductase
Structure, 9, 2001
3C1U
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D192N mutant of Rhamnogalacturonan acetylesterase
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, Rhamnogalacturonan acetylesterase
著者Langkilde, A, Lo Leggio, L, Navarro Poulsen, J.C, Molgaard, A, Larsen, S.
登録日2008-01-24
公開日2008-08-05
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.33 Å)
主引用文献Short strong hydrogen bonds in proteins: a case study of rhamnogalacturonan acetylesterase
ACTA CRYSTALLOGR.,SECT.D, 64, 2008
1PKL
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THE STRUCTURE OF LEISHMANIA PYRUVATE KINASE
分子名称: PROTEIN (PYRUVATE KINASE), SULFATE ION
著者Rigden, D.J, Phillips, S.E.V, Michels, P.A.M, Fothergill-Gilmore, L.A.
登録日1998-09-15
公開日1998-09-23
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献The structure of pyruvate kinase from Leishmania mexicana reveals details of the allosteric transition and unusual effector specificity.
J.Mol.Biol., 291, 1999
1PRB
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STRUCTURE OF AN ALBUMIN-BINDING DOMAIN, NMR, MINIMIZED AVERAGE STRUCTURE
分子名称: PROTEIN PAB
著者Johansson, M.U, De Chateau, M, Wikstrom, M, Forsen, S, Drakenberg, T, Bjorck, L.
登録日1997-01-15
公開日1997-07-23
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution structure of the albumin-binding GA module: a versatile bacterial protein domain.
J.Mol.Biol., 266, 1997
1HQ1
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STRUCTURAL AND ENERGETIC ANALYSIS OF RNA RECOGNITION BY A UNIVERSALLY CONSERVED PROTEIN FROM THE SIGNAL RECOGNITION PARTICLE
分子名称: 4.5S RNA DOMAIN IV, MAGNESIUM ION, POTASSIUM ION, ...
著者Batey, R.T, Sagar, M.B, Doudna, J.A.
登録日2000-12-13
公開日2001-01-03
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.52 Å)
主引用文献Structural and energetic analysis of RNA recognition by a universally conserved protein from the signal recognition particle.
J.Mol.Biol., 307, 2001
2PL6
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Monoclinic crystal structure of hydrophobin HFBII in presence of a detergent
分子名称: Hydrophobin-2, heptyl 1-thio-beta-D-glucopyranoside
著者Kallio, J.M, Rouvinen, J.P.
登録日2007-04-19
公開日2007-07-17
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal Structures of Hydrophobin HFBII in the Presence of Detergent Implicate the Formation of Fibrils and Monolayer Films.
J.Biol.Chem., 282, 2007
1BBG
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RAGWEED POLLEN ALLERGEN FROM AMBROSIA TRIFIDA V, NMR, MINIMIZED AVERAGE STRUCTURE
分子名称: POLLEN ALLERGEN 5
著者Warren, G.L, Tuner, C.J, Petsko, G.A, Brunger, A.T.
登録日1998-04-24
公開日1998-06-17
最終更新日2022-02-16
実験手法SOLUTION NMR
主引用文献A Highly Precise Solution 1H NMR Structure of Ragweed Allergen Amb. T. V
To be Published
1TIC
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BU of 1tic by Molmil
CONFORMATIONAL LABILITY OF LIPASES OBSERVED IN THE ABSENCE OF AN OIL-WATER INTERFACE: CRYSTALLOGRAPHIC STUDIES OF ENZYMES FROM THE FUNGI HUMICOLA LANUGINOSA AND RHIZOPUS DELEMAR
分子名称: LIPASE
著者Derewenda, U, Swenson, L, Green, R, Joerger, R, Haas, M.J, Derewenda, Z.S.
登録日1993-12-06
公開日1995-01-26
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Conformational lability of lipases observed in the absence of an oil-water interface: crystallographic studies of enzymes from the fungi Humicola lanuginosa and Rhizopus delemar.
J.Lipid Res., 35, 1994
1QT9
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OXIDIZED [2FE-2S] FERREDOXIN FROM ANABAENA PCC7119
分子名称: FE2/S2 (INORGANIC) CLUSTER, FERREDOXIN I
著者Morales, R, Chron, M.-H, Hudry-Clergeon, G, Petillot, Y, Norager, S, Medina, M, Frey, M.
登録日1999-07-01
公開日1999-12-02
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Refined X-ray structures of the oxidized, at 1.3 A, and reduced, at 1.17 A, [2Fe-2S] ferredoxin from the cyanobacterium Anabaena PCC7119 show redox-linked conformational changes.
Biochemistry, 38, 1999
1P5A
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Conformational Mapping of the N-terminal Peptide of HIV-1 GP41 in lipid detergent and aqueous environments using 13C-enhanced Fourier Transform Infrared Spectroscopy
分子名称: Envelope polyprotein GP160
著者Gordon, L.M, Mobley, P.W, Lee, W, Eskandari, S, Kaznessis, Y.N, Sherman, M.A, Waring, A.J.
登録日2003-04-25
公開日2003-05-20
最終更新日2011-07-13
実験手法INFRARED SPECTROSCOPY
主引用文献Conformational mapping of the N-terminal peptide of HIV-1 gp41 in lipid detergent and aqueous environments using 13C-enhanced Fourier transform infrared spectroscopy.
Protein Sci., 13, 2004
3CEL
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ACTIVE-SITE MUTANT E212Q DETERMINED AT PH 6.0 WITH CELLOBIOSE BOUND IN THE ACTIVE SITE
分子名称: 1,4-BETA-D-GLUCAN CELLOBIOHYDROLASE I, 2-acetamido-2-deoxy-beta-D-glucopyranose, CADMIUM ION, ...
著者Divne, C, Stahlberg, J, Jones, T.A.
登録日1996-08-24
公開日1997-03-12
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Activity studies and crystal structures of catalytically deficient mutants of cellobiohydrolase I from Trichoderma reesei.
J.Mol.Biol., 264, 1996
1QVJ
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structure of NUDT9 complexed with ribose-5-phosphate
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 5-O-phosphono-beta-D-ribofuranose, ADP-ribose pyrophosphatase, ...
著者Shen, B.W, Perraud, A.-L, Scharenberg, A.S, Stoddard, B.L.
登録日2003-08-27
公開日2003-09-16
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献The crystal structure and mutational analysis of human NUDT9
J.Mol.Biol., 332, 2003
2IT6
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Crystal Structure of DCSIGN-CRD with man2
分子名称: CALCIUM ION, CD209 antigen, alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose
著者Weis, W.I, Feinberg, H, Castelli, R, Drickamer, K, Seeberger, P.H.
登録日2006-10-19
公開日2006-12-05
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Multiple modes of binding enhance the affinity of DC-SIGN for high mannose N-linked glycans found on viral glycoproteins.
J.Biol.Chem., 282, 2007

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