PDB: 48062 件ウェブページステータス検索Chemie searchBIRD

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2ZDA	Exploring Thrombin S1 pocket 分子名称: D-phenylalanyl-N-{4-[amino(iminio)methyl]benzyl}-L-prolinamide, Hirudin variant-1, PHOSPHATE ION, ... 著者 Baum, B, Heine, A, Klebe, G. 登録日 2007-11-21 公開日 2008-10-28 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.73 Å) 主引用文献 Think twice: understanding the high potency of bis(phenyl)methane inhibitors of thrombin J.Mol.Biol., 391, 2009
2ZDO	Crystal structure of IsdG-N7A in complex with hemin 分子名称: Heme-degrading monooxygenase isdG, PROTOPORPHYRIN IX CONTAINING FE 著者 Lee, W.C, Reniere, M.L, Skaar, E.P, Murphy, M.E.P. 登録日 2007-11-27 公開日 2008-08-19 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Ruffling of Metalloporphyrins Bound to IsdG and IsdI, Two Heme-degrading Enzymes in Staphylococcus aureus J.Biol.Chem., 283, 2008
5BON	Crystal structure of human Nudt15 (MTH2) 分子名称: MAGNESIUM ION, Probable 8-oxo-dGTP diphosphatase NUDT15 著者 Carter, M, Jemth, A.-S, Helleday, T, Stenmark, P. 登録日 2015-05-27 公開日 2015-08-05 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.799 Å) 主引用文献 Crystal structure, biochemical and cellular activities demonstrate separate functions of MTH1 and MTH2. Nat Commun, 6, 2015
7O9C	diNi-sulerythrin treated by hydrogen perxoide 分子名称: CHLORIDE ION, NICKEL (II) ION, Sulerythrin 著者 Jeoung, J.-H, Dobbek, H. 登録日 2021-04-15 公開日 2021-12-01 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Bimetallic Mn, Fe, Co, and Ni Sites in a Four-Helix Bundle Protein: Metal Binding, Structure, and Peroxide Activation. Inorg.Chem., 60, 2021
5XB1	human ferritin mutant - E-helix deletion 分子名称: Ferritin heavy chain 著者 Lee, S.G, Ahn, B.J, Jeong, H, Kim, H, Hyun, J, Jung, Y. 登録日 2017-03-15 公開日 2018-02-21 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 Four-fold Channel-Nicked Human Ferritin Nanocages for Active Drug Loading and pH-Responsive Drug Release Angew. Chem. Int. Ed. Engl., 57, 2018
2ZAV	Arginase I (homo sapiens): native and unliganded structure at 1.70 A resolution 分子名称: Arginase-1, MANGANESE (II) ION 著者 Di Costanzo, L, Christianson, D.W. 登録日 2007-10-11 公開日 2007-10-30 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Crystal structure of human arginase I complexed with thiosemicarbazide reveals an unusual thiocarbonyl mu-sulfide ligand in the binuclear manganese cluster J.Am.Chem.Soc., 129, 2007
7O99	diMn-sulerythrin 分子名称: CHLORIDE ION, COBALT (II) ION, Sulerythrin 著者 Jeoung, J.-H, Dobbek, H. 登録日 2021-04-15 公開日 2021-12-01 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.24 Å) 主引用文献 Bimetallic Mn, Fe, Co, and Ni Sites in a Four-Helix Bundle Protein: Metal Binding, Structure, and Peroxide Activation. Inorg.Chem., 60, 2021
7O91	diMn-sulerythrin 分子名称: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, MANGANESE (II) ION, ... 著者 Jeoung, J.-H, Dobbek, H. 登録日 2021-04-15 公開日 2021-12-01 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.1 Å) 主引用文献 Bimetallic Mn, Fe, Co, and Ni Sites in a Four-Helix Bundle Protein: Metal Binding, Structure, and Peroxide Activation. Inorg.Chem., 60, 2021
4PIN	Ergothioneine-biosynthetic methyltransferase EgtD in complex with N,N-dimethylhistidine 分子名称: Histidine-specific methyltransferase EgtD, N,N-dimethyl-L-histidine, PHOSPHATE ION 著者 Vit, A, Seebeck, F.P, Blankenfeldt, W. 登録日 2014-05-09 公開日 2014-12-03 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Ergothioneine Biosynthetic Methyltransferase EgtD Reveals the Structural Basis of Aromatic Amino Acid Betaine Biosynthesis. Chembiochem, 16, 2015
2D3A	Crystal Structure of the Maize Glutamine Synthetase complexed with ADP and Methionine sulfoximine Phosphate 分子名称: ADENOSINE-5'-DIPHOSPHATE, L-METHIONINE-S-SULFOXIMINE PHOSPHATE, MANGANESE (II) ION, ... 著者 Unno, H, Uchida, T, Sugawara, H, Kurisu, G, Sugiyama, T, Yamaya, T, Sakakibara, H, Hase, T, Kusunoki, M. 登録日 2005-09-26 公開日 2006-07-18 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.63 Å) 主引用文献 Atomic Structure of Plant Glutamine Synthetase: A KEY ENZYME FOR PLANT PRODUCTIVITY J.Biol.Chem., 281, 2006
6WXG	Cryo-EM reconstruction of VP5*/VP8* assembly from rhesus rotavirus particles - Reversed conformation 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Intermediate capsid protein VP6, ... 著者 Herrmann, T, Harrison, S.C, Jenni, S. 登録日 2020-05-10 公開日 2021-01-20 最終更新日 2021-03-10 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 Functional refolding of the penetration protein on a non-enveloped virus. Nature, 590, 2021
1PJD	Structure and Topology of a Peptide Segment of the 6th Transmembrane Domain of the Saccharomyces cerevisiae alpha-Factor Receptor in Phospholipid Bilayers 分子名称: Pheromone alpha factor receptor 著者 Valentine, K.G, Liu, S.-F, Marassi, F.M, Veglia, G, Nevzorov, A.A, Opella, S.J, Ding, F.-X, Wang, S.-H, Arshava, B, Becker, J.M, Naider, F. 登録日 2003-06-02 公開日 2003-09-16 最終更新日 2024-05-22 実験手法 SOLID-STATE NMR 主引用文献 Structure and Topology of a Peptide Segment of the 6th Transmembrane Domain of the Saccharomyces cerevisiae alpha-Factor Receptor in Phospholipid Bilayers Biopolymers, 59, 2001
2N2X	Solution structure of [GlyB24,B27-B29 triazole cross-linked]-insulin analogue at pH 1.9 分子名称: Insulin A chain, Insulin B chain 著者 Veverka, V, Hexnerova, R, Jiracek, J. 登録日 2015-05-15 公開日 2016-02-03 最終更新日 2023-12-27 実験手法 SOLUTION NMR 主引用文献 Rational steering of insulin binding specificity by intra-chain chemical crosslinking. Sci Rep, 6, 2016
7O9E	diNi-sulerythrin 分子名称: CHLORIDE ION, NICKEL (II) ION, Sulerythrin 著者 Jeoung, J.-H, Dobbek, H. 登録日 2021-04-15 公開日 2021-12-01 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.25 Å) 主引用文献 Bimetallic Mn, Fe, Co, and Ni Sites in a Four-Helix Bundle Protein: Metal Binding, Structure, and Peroxide Activation. Inorg.Chem., 60, 2021
6WJ2	CryoEM structure of the SLC38A9-RagA-RagC-Ragulator complex in the pre-GAP state 分子名称: 9-{5-O-[(S)-hydroxy{[(R)-hydroxy(thiophosphonooxy)phosphoryl]oxy}phosphoryl]-alpha-L-arabinofuranosyl}-3,9-dihydro-1H-purine-2,6-dione, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ... 著者 Fromm, S.A, Hurley, J.H. 登録日 2020-04-11 公開日 2020-09-02 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Structural mechanism for amino acid-dependent Rag GTPase nucleotide state switching by SLC38A9. Nat.Struct.Mol.Biol., 27, 2020
5BPM	Crystal structure of unhydrolyzed ATP bound human Hsp70 NBD double mutant E268Q+R272K. 分子名称: ADENOSINE-5'-TRIPHOSPHATE, CHLORIDE ION, Heat shock 70 kDa protein 1A, ... 著者 Narayanan, D, Engh, R.A. 登録日 2015-05-28 公開日 2016-09-14 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.83 Å) 主引用文献 Nucleotide binding to variants of the HSP70-NBD. To Be Published
4Y2Q	Structure of soluble epoxide hydrolase in complex with 1-[3-(trifluoromethyl)pyridin-2-yl]piperazine 分子名称: 1-[3-(trifluoromethyl)pyridin-2-yl]piperazine, Bifunctional epoxide hydrolase 2, MAGNESIUM ION 著者 Amano, Y, Yamaguchi, T. 登録日 2015-02-10 公開日 2015-05-06 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Identification of N-ethylmethylamine as a novel scaffold for inhibitors of soluble epoxide hydrolase by crystallographic fragment screening Bioorg.Med.Chem., 23, 2015
7O8A	diFe-sulerythrin reduced with Na-dithionite 分子名称: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, FE (III) ION, ... 著者 Jeoung, J.-H, Dobbek, H. 登録日 2021-04-15 公開日 2021-12-01 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.21 Å) 主引用文献 Bimetallic Mn, Fe, Co, and Ni Sites in a Four-Helix Bundle Protein: Metal Binding, Structure, and Peroxide Activation. Inorg.Chem., 60, 2021
5EQH	Human GLUT1 in complex with inhibitor (2~{S})-3-(2-bromophenyl)-2-[2-(4-methoxyphenyl)ethanoylamino]-~{N}-[(1~{S})-1-phenylethyl]propanamide 分子名称: (2~{S})-3-(2-bromophenyl)-2-[2-(4-methoxyphenyl)ethanoylamino]-~{N}-[(1~{S})-1-phenylethyl]propanamide, Solute carrier family 2, facilitated glucose transporter member 1 著者 Kapoor, K, Finer-Moore, J, Pedersen, B.P, Caboni, L, Waight, A.B, Hillig, R, Bringmann, P, Heisler, I, Muller, T, Siebeneicher, H, Stroud, R.M. 登録日 2015-11-12 公開日 2016-04-13 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.99 Å) 主引用文献 Mechanism of inhibition of human glucose transporter GLUT1 is conserved between cytochalasin B and phenylalanine amides. Proc.Natl.Acad.Sci.USA, 113, 2016
4Y35	Endothiapepsin in complex with fragment 290 分子名称: 4-chlorobenzyl carbamimidothioate, ACETATE ION, DIMETHYL SULFOXIDE, ... 著者 Wang, X, Heine, A, Klebe, G. 登録日 2015-02-10 公開日 2016-03-02 実験手法 X-RAY DIFFRACTION (1.457 Å) 主引用文献 Crystallographic Fragment Screening of an Entire Library To Be Published
2ZG7	Crystal Structure of Pd(allyl)/apo-Fr 分子名称: 1,2-ETHANEDIOL, CADMIUM ION, Ferritin light chain, ... 著者 Abe, S, Niemeyer, J, Abe, M, Ueno, T, Hikage, T, Erker, G, Watanabe, Y. 登録日 2008-01-18 公開日 2008-08-26 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Control of the coordination structure of organometallic palladium complexes in an apo-ferritin cage. J.Am.Chem.Soc., 130, 2008
2X06	SULFOLACTATE DEHYDROGENASE FROM METHANOCALDOCOCCUS JANNASCHII 分子名称: L-SULFOLACTATE DEHYDROGENASE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE 著者 Irimia, A, Madern, D, Zaccai, G, Vellieux, F.M.D. 登録日 2009-12-07 公開日 2009-12-15 最終更新日 2019-02-06 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Methanoarchaeal Sulfolactate Dehydrogenase: Prototype of a New Family of Nadh-Dependent Enzymes. Embo J., 23, 2004
2D3C	Crystal Structure of the Maize Glutamine Synthetase complexed with ADP and Phosphinothricin Phosphate 分子名称: (2S)-2-AMINO-4-[METHYL(PHOSPHONOOXY)PHOSPHORYL]BUTANOIC ACID, ADENOSINE-5'-DIPHOSPHATE, MANGANESE (II) ION, ... 著者 Unno, H, Uchida, T, Sugawara, H, Kurisu, G, Sugiyama, T, Yamaya, T, Sakakibara, H, Hase, T, Kusunoki, M. 登録日 2005-09-26 公開日 2006-07-18 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (3.81 Å) 主引用文献 Atomic Structure of Plant Glutamine Synthetase: A KEY ENZYME FOR PLANT PRODUCTIVITY J.Biol.Chem., 281, 2006
5EPI	CRYSTAL STRUCTURE OF INFLUENZA B POLYMERASE WITH BOUND 5' CRNA EXHIBITS A NOVEL DOMAIN ARRANGEMENT 分子名称: CRNA 5' END, Polymerase acidic protein, Polymerase basic protein 2, ... 著者 Guilligay, D, Cusack, S. 登録日 2015-11-11 公開日 2016-01-13 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (4.1 Å) 主引用文献 Influenza Polymerase Can Adopt an Alternative Configuration Involving a Radical Repacking of PB2 Domains. Mol.Cell, 61, 2016
6WK3	Engineered carbene transferase RmaNOD Q52V, putative nitric oxide dioxygenase from Rhodothermus marinus 分子名称: ACETATE ION, COPPER (II) ION, Nitric oxide dioxygenase, ... 著者 Knight, A.M, Arnold, F.H. 登録日 2020-04-15 公開日 2020-07-08 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (2.45 Å) 主引用文献 Diversity-Oriented Enzymatic Synthesis of Cyclopropane Building Blocks. Acs Catalysis, 10, 2020

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