PDB: 187781 件ウェブページステータス検索Chemie searchBIRD

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9FOJ	LGTV TP21. Langat virus, strain TP21 分子名称: 1-PALMITOYL-2-LINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope protein E, ... 著者 Bisikalo, K, Rosendal, E. 登録日 2024-06-12 公開日 2024-11-06 最終更新日 2024-11-27 実験手法 ELECTRON MICROSCOPY (3.82 Å) 主引用文献 The influence of the pre-membrane and envelope proteins on structure, pathogenicity and tropism of tick-borne encephalitis virus Biorxiv, 2024
4ZP2	Crystal structure of E. coli multidrug transporter MdfA in complex with n-dodecyl-N,N-dimethylamine-N-oxide 分子名称: LAURYL DIMETHYLAMINE-N-OXIDE, Multidrug transporter MdfA 著者 Zhang, X.C, Heng, J, Zhao, Y, Wang, X. 登録日 2015-05-07 公開日 2015-08-19 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Substrate-bound structure of the E. coli multidrug resistance transporter MdfA Cell Res., 25, 2015
3C9C	Structural Basis of Histone H4 Recognition by p55 分子名称: CADMIUM ION, Chromatin assembly factor 1 p55 subunit, Histone H4, ... 著者 Song, J.J, Garlick, J.D, Kingston, R.E. 登録日 2008-02-15 公開日 2008-05-13 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Structural basis of histone H4 recognition by p55. Genes Dev., 22, 2008
9BRB	Synaptic Vesicle V-ATPase with synaptophysin and SidK, State 1 分子名称: ATPase H+-transporting V1 subunit D, ATPase, H+ transporting, ... 著者 Coupland, C.E, Rubinstein, J.L. 登録日 2024-05-11 公開日 2024-06-26 最終更新日 2024-07-24 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 High-resolution electron cryomicroscopy of V-ATPase in native synaptic vesicles. Science, 385, 2024
9BRD	Synaptic Vesicle V-ATPase with synaptophysin and SidK, State 3 分子名称: (7R)-4,7-DIHYDROXY-N,N,N-TRIMETHYL-10-OXO-3,5,9-TRIOXA-4-PHOSPHAHEPTACOSAN-1-AMINIUM 4-OXIDE, 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Coupland, C.E, Rubinstein, J.L. 登録日 2024-05-11 公開日 2024-06-26 最終更新日 2024-11-20 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 High-resolution electron cryomicroscopy of V-ATPase in native synaptic vesicles. Science, 385, 2024
9BRC	Synaptic Vesicle V-ATPase with synaptophysin and SidK, State 2 分子名称: ATPase H+-transporting V1 subunit D, ATPase, H+ transporting, ... 著者 Coupland, C.E, Rubinstein, J.L. 登録日 2024-05-11 公開日 2024-06-26 最終更新日 2024-07-24 実験手法 ELECTRON MICROSCOPY (3.9 Å) 主引用文献 High-resolution electron cryomicroscopy of V-ATPase in native synaptic vesicles. Science, 385, 2024
4W6W	Co-complex structure of the lectin domain of F18 fimbrial adhesin FedF with inhibitory nanobody NbFedF6 分子名称: F18 fimbrial adhesin AC, NbFedF6 著者 Moonens, K, De Kerpel, M, Annelies, C, Cox, E, Pardon, E, Remaut, H, De Greve, H. 登録日 2014-08-21 公開日 2014-12-17 最終更新日 2024-11-06 実験手法 X-RAY DIFFRACTION (2.51 Å) 主引用文献 Nanobody Mediated Inhibition of Attachment of F18 Fimbriae Expressing Escherichia coli. Plos One, 9, 2014
3CFS	Structural basis of the interaction of RbAp46/RbAp48 with histone H4 分子名称: ARSENIC, Histone H4, Histone-binding protein RBBP7 著者 Murzina, N.V, Pei, X.-Y, Pratap, J.V, Sparkes, M, Vicente-Garcia, J, Ben-Shahar, T.R, Verreault, A, Luisi, B.F, Laue, E.D. 登録日 2008-03-04 公開日 2008-06-10 最終更新日 2024-11-06 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Structural Basis for the Recognition of Histone H4 by the Histone-Chaperone RbAp46. Structure, 16, 2008
4W6X	Co-complex structure of the lectin domain of F18 fimbrial adhesin FedF with inhibitory nanobody NbFedF7 分子名称: F18 fimbrial adhesin AC, Nanobody NbFedF7 著者 Moonens, K, De Kerpel, M, Coddens, A, Cox, E, Pardon, E, Remaut, H, De Greve, H. 登録日 2014-08-21 公開日 2014-12-17 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (1.88 Å) 主引用文献 Nanobody Mediated Inhibition of Attachment of F18 Fimbriae Expressing Escherichia coli. Plos One, 9, 2014
4X9E	DEOXYGUANOSINETRIPHOSPHATE TRIPHOSPHOHYDROLASE from Escherichia coli with two DNA effector molecules 分子名称: Deoxyguanosinetriphosphate triphosphohydrolase, MAGNESIUM ION, RNA (5'-R(P*CP*CP*C)-3') 著者 Singh, D, Gawel, D, Itsko, M, Krahn, J.M, London, R.E, Schaaper, R.M. 登録日 2014-12-11 公開日 2015-02-25 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (3.1 Å) 主引用文献 Structure of Escherichia coli dGTP Triphosphohydrolase: A HEXAMERIC ENZYME WITH DNA EFFECTOR MOLECULES. J.Biol.Chem., 290, 2015
3CG5	Crystal Structure of the Covalent Adduct Formed between TB B-lactamase and Clavulanate 分子名称: (2E)-3-[(4-hydroxy-2-oxobutyl)amino]prop-2-enal, Beta-lactamase, PHOSPHATE ION 著者 Tremblay, L.W, Hugonnet, J.E, Blanchard, J.S. 登録日 2008-03-04 公開日 2008-05-27 最終更新日 2024-11-06 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Structure of the covalent adduct formed between Mycobacterium tuberculosis beta-lactamase and clavulanate. Biochemistry, 47, 2008
7NPR	Structure of an intact ESX-5 inner membrane complex, Composite C3 model 分子名称: ESX-5 secretion system ATPase EccB5, ESX-5 secretion system protein EccC5, ESX-5 secretion system protein EccD5, ... 著者 Fahrenkamp, D, Bunduc, C.M, Wald, J, Ummels, R, Bitter, W, Houben, E.N.G, Marlovits, T.C. 登録日 2021-02-28 公開日 2021-06-02 最終更新日 2024-11-13 実験手法 ELECTRON MICROSCOPY (3.82 Å) 主引用文献 Structure and dynamics of a mycobacterial type VII secretion system. Nature, 593, 2021
9BQ4	YTP-E E148D, a weakly yellow thermostable protein 分子名称: Weakly yellow thermostable protein YTP-E 著者 Padgett, C, Ogbeifun, V, DeVore, N.M. 登録日 2024-05-09 公開日 2024-09-04 最終更新日 2024-11-13 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 The Crystal Structure of Thermal Green Protein Q66E (TGP-E) and Yellow Thermostable Protein (YTP-E) E148D SynBio, 2, 2024
7NP7	Structure of an intact ESX-5 inner membrane complex, Composite C1 model 分子名称: ESX-5 secretion system ATPase EccB5, ESX-5 secretion system protein EccC5, ESX-5 secretion system protein EccD5, ... 著者 Fahrenkamp, D, Bunduc, C.M, Wald, J, Ummels, R, Bitter, W, Houben, E.N.G, Marlovits, T.C. 登録日 2021-02-26 公開日 2021-06-02 最終更新日 2024-10-16 実験手法 ELECTRON MICROSCOPY (4.03 Å) 主引用文献 Structure and dynamics of a mycobacterial type VII secretion system. Nature, 593, 2021
5YFI	Crystal structure of the anti-human prostaglandin E receptor EP4 antibody Fab fragment 分子名称: Heavy chain of Fab fragment, Light chain of Fab fragment, ZINC ION 著者 Toyoda, Y, Morimoto, K, Suno, R, Horita, S, Iwata, S, Kobayashi, T. 登録日 2017-09-21 公開日 2018-12-05 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (1.848 Å) 主引用文献 Ligand binding to human prostaglandin E receptor EP4at the lipid-bilayer interface. Nat. Chem. Biol., 15, 2019
3JZ7	Crystal structure of the extracellular domains of coxsackie & adenovirus receptor from mouse (mCAR) 分子名称: Coxsackievirus and adenovirus receptor homolog, ISOPROPYL ALCOHOL 著者 Max, K.E.A, Heinemann, U. 登録日 2009-09-23 公開日 2010-03-16 最終更新日 2024-11-06 実験手法 X-RAY DIFFRACTION (2.19 Å) 主引用文献 The coxsackievirus-adenovirus receptor reveals complex homophilic and heterophilic interactions on neural cells. J.Neurosci., 30, 2010
4UHS	Crystal structure of the receiver domain of CpxR from E. coli (tetragonal form) 分子名称: MAGNESIUM ION, TRANSCRIPTIONAL REGULATORY PROTEIN CPXR 著者 Mechaly, A.E, Alzari, P.M.A. 登録日 2015-03-25 公開日 2016-04-13 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (5 Å) 主引用文献 Conformational plasticity of the response regulator CpxR, a key player in Gammaproteobacteria virulence and drug-resistance. J. Struct. Biol., 204, 2018
4WA9	The crystal structure of human abl1 wild type kinase domain in complex with axitinib 分子名称: AXITINIB, Tyrosine-protein kinase ABL1 著者 Johnson, E, McTigue, M, Cronin, C.N. 登録日 2014-08-28 公開日 2015-02-11 最終更新日 2024-08-07 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Axitinib effectively inhibits BCR-ABL1(T315I) with a distinct binding conformation. Nature, 519, 2015
4UM4	STRUCTURE OF INORGANIC PYROPHOSPHATASE FROM ESCHERICHIA COLI IN COMPLEX WITH SULFATE 分子名称: INORGANIC PYROPHOSPHATASE, SULFATE ION 著者 Campos-Acevedo, A.A, Rudino-Pinera, E. 登録日 2014-05-15 公開日 2014-11-26 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.65 Å) 主引用文献 First attempts to crystallize a non-homogeneous sample of thioredoxin from Litopenaeus vannamei: What to do when you have diffraction data of a protein that is not the target? Biochem Biophys Rep, 8, 2016
5YHL	Crystal structure of the human prostaglandin E receptor EP4 in complex with Fab and an antagonist Br-derivative 分子名称: 4-[2-[[(2R)-2-(4-bromanylnaphthalen-1-yl)propanoyl]amino]-4-cyano-phenyl]butanoic acid, Heavy chain of Fab fragment, Light chain of Fab fragment, ... 著者 Toyoda, Y, Morimoto, K, Suno, R, Horita, S, Iwata, S, Kobayashi, T. 登録日 2017-09-28 公開日 2018-12-05 最終更新日 2024-11-06 実験手法 X-RAY DIFFRACTION (4.2 Å) 主引用文献 Ligand binding to human prostaglandin E receptor EP4at the lipid-bilayer interface. Nat. Chem. Biol., 15, 2019
4UHT	Crystal structure of the DNA binding domain of CpxR from E. coli 分子名称: CHLORIDE ION, TRANSCRIPTIONAL REGULATORY PROTEIN CPXR 著者 Mechaly, A.E, Alzari, P.M.A. 登録日 2015-03-25 公開日 2016-04-13 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.15 Å) 主引用文献 Conformational plasticity of the response regulator CpxR, a key player in Gammaproteobacteria virulence and drug-resistance. J. Struct. Biol., 204, 2018
5A24	Crystal structure of Dionain-1, the major endopeptidase in the Venus flytrap digestive juice 分子名称: DIONAIN-1, N-[N-[1-HYDROXYCARBOXYETHYL-CARBONYL]LEUCYLAMINO-BUTYL]-GUANIDINE, PHOSPHATE ION 著者 Risor, M.W, Thomsen, L.R, Sanggaard, K.W, Nielsen, T.A, Thogersen, I.B, Lukassen, M.V, Rossen, L, Garcia-Ferrer, I, Guevara, T, Meinjohanns, E, Nielsen, N.C, Gomis-Ruth, F.X, Enghild, J.J. 登録日 2015-05-12 公開日 2015-12-09 最終更新日 2024-11-13 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Enzymatic and Structural Characterization of the Major Endopeptidase in the Venus Flytrap Digestion Fluid. J.Biol.Chem., 291, 2016
9FMT	Cryo-EM structure of the BcsB hexameric crown from the E. coli cellulose secretion macrocomplex 分子名称: Cyclic di-GMP-binding protein 著者 Anso, I, Krasteva, P.V. 登録日 2024-06-07 公開日 2024-10-16 最終更新日 2024-11-06 実験手法 ELECTRON MICROSCOPY (2.35 Å) 主引用文献 Structural basis for synthase activation and cellulose modification in the E. coli Type II Bcs secretion system. Nat Commun, 15, 2024
9FP2	Cryo-EM structure of the BcsEFRQ regulatory subcomplex for E. coli cellulose secretion in non-saturating c-di-GMP (local) 分子名称: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), ADENOSINE-5'-TRIPHOSPHATE, Cell division protein, ... 著者 Anso, I, Krasteva, P.V. 登録日 2024-06-12 公開日 2024-10-16 最終更新日 2024-10-23 実験手法 ELECTRON MICROSCOPY (3.76 Å) 主引用文献 Structural basis for synthase activation and cellulose modification in the E. coli Type II Bcs secretion system. Nat Commun, 15, 2024
9FP0	Cryo-EM structure of the 'crown'less Bcs macrocomplex for E. coli cellulose secretion in non-saturating c-di-GMP (local) 分子名称: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), ADENOSINE-5'-TRIPHOSPHATE, Cell division protein, ... 著者 Anso, I, Krasteva, P.V. 登録日 2024-06-12 公開日 2024-10-16 最終更新日 2024-10-23 実験手法 ELECTRON MICROSCOPY (3.37 Å) 主引用文献 Structural basis for synthase activation and cellulose modification in the E. coli Type II Bcs secretion system. Nat Commun, 15, 2024

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