PDB: 225946 件ウェブページステータス検索Chemie searchBIRD

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3ZFS	Cryo-EM structure of the F420-reducing NiFe-hydrogenase from a methanogenic archaeon with bound substrate 分子名称: CARBONMONOXIDE-(DICYANO) IRON, COENZYME F420, F420-REDUCING HYDROGENASE, ... 著者 Mills, D.J, Vitt, S, Strauss, M, Shima, S, Vonck, J. 登録日 2012-12-12 公開日 2013-03-06 最終更新日 2024-05-08 実験手法 ELECTRON MICROSCOPY (4 Å) 主引用文献 De Novo Modeling of the F420-Reducing [Nife]-Hydrogenase from a Methanogenic Archaeon by Cryo-Electron Microscopy Elife, 2, 2013
1DD4	Crystal structure of ribosomal protein l12 from thermotoga maritim 分子名称: 50S RIBOSOMAL PROTEIN L7/L12, HEXATANTALUM DODECABROMIDE 著者 Wahl, M.C, Bourenkov, G.P, Bartunik, H.D, Huber, R. 登録日 1999-11-08 公開日 2000-11-13 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Flexibility, conformational diversity and two dimerization modes in complexes of ribosomal protein L12. Embo J., 19, 2000
1DD3	CRYSTAL STRUCTURE OF RIBOSOMAL PROTEIN L12 FROM THERMOTOGA MARITIMA 分子名称: 50S RIBOSOMAL PROTEIN L7/L12 著者 Wahl, M.C, Bourenkov, G.P, Bartunik, H.D, Huber, R. 登録日 1999-11-08 公開日 2000-11-13 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Flexibility, conformational diversity and two dimerization modes in complexes of ribosomal protein L12. EMBO J., 19, 2000
1GNL	Hybrid Cluster Protein from Desulfovibrio desulfuricans X-ray structure at 1.25A resolution using synchrotron radiation at a wavelength of 0.933A 分子名称: ACETATE ION, HYBRID CLUSTER PROTEIN, IRON/SULFUR CLUSTER, ... 著者 Macedo, S, Mitchell, E.P, Romao, C.V, Cooper, S.J, Coelho, R, Liu, M.Y, Xavier, A.V, Legall, J, Bailey, S, Garner, D.C, Hagen, W.R, Teixeira, M, Carrondo, M.A, Lindley, P. 登録日 2001-10-05 公開日 2002-04-11 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.25 Å) 主引用文献 Hybrid Cluster Proteins (Hcps) from Desulfovibrio Desulfuricans Atcc 27774 and Desulfovibrio Vulgaris (Hildenborough): X-Ray Structures at 1.25 A Resolution Using Synchrotron Radiation. J.Biol.Inorg.Chem., 7, 2002
1I5T	SOLUTION STRUCTURE OF CYANOFERRICYTOCHROME C 分子名称: CYANIDE ION, CYTOCHROME C, HEME C 著者 Yao, Y, Qian, C, Ye, K, Wang, J, Tang, W. 登録日 2001-02-28 公開日 2001-03-21 最終更新日 2022-02-23 実験手法 SOLUTION NMR 主引用文献 Solution structure of cyanoferricytochrome c: ligand-controlled conformational flexibility and electronic structure of the heme moiety. J.Biol.Inorg.Chem., 7, 2002
1GN9	Hybrid Cluster Protein from Desulfovibrio desulfuricans ATCC 27774 X-ray structure at 2.6A resolution using synchrotron radiation at a wavelength of 1.722A 分子名称: HYBRID CLUSTER PROTEIN, IRON/SULFUR CLUSTER, IRON/SULFUR/OXYGEN HYBRID CLUSTER 著者 Macedo, S, Mitchell, E.P, Romao, C.V, Cooper, S.J, Coelho, R, Liu, M.Y, Xavier, A.V, Legall, J, Bailey, S, Garner, D.C, Hagen, W.R, Teixeira, M, Carrondo, M.A, Lindley, P. 登録日 2001-10-04 公開日 2002-04-11 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Hybrid Cluster Proteins (Hcps) from Desulfovibrio Desulfuricans Atcc 27774 and Desulfovibrio Vulgaris (Hildenborough): X-Ray Structures at 1.25 A Resolution Using Synchrotron Radiation. J.Biol.Inorg.Chem., 7, 2002
1K0T	NMR SOLUTION STRUCTURE OF UNBOUND, OXIDIZED PHOTOSYSTEM I SUBUNIT PSAC, CONTAINING [4FE-4S] CLUSTERS FA AND FB 分子名称: IRON/SULFUR CLUSTER, PSAC SUBUNIT OF PHOTOSYSTEM I 著者 Antonkine, M.L, Liu, G, Bentrop, D, Bryant, D.A, Bertini, I, Luchinat, C, Golbeck, J.H, Stehlik, D. 登録日 2001-09-20 公開日 2002-06-05 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Solution structure of the unbound, oxidized Photosystem I subunit PsaC, containing [4Fe-4S] clusters F(A) and F(B): a conformational change occurs upon binding to photosystem I. J.Biol.Inorg.Chem., 7, 2002
1GNT	Hybrid Cluster Protein from Desulfovibrio vulgaris. X-ray structure at 1.25A resolution using synchrotron radiation. 分子名称: HYBRID CLUSTER PROTEIN, IRON/SULFUR CLUSTER, IRON/SULFUR/OXYGEN HYBRID CLUSTER 著者 Macedo, S, Mitchell, E.P, Romao, C.V, Cooper, S.J, Coelho, R, Liu, M.Y, Xavier, A.V, Legall, J, Bailey, S, Garner, D.C, Hagen, W.R, Teixeira, M, Carrondo, M.A, Lindley, P. 登録日 2001-10-08 公開日 2002-04-11 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.25 Å) 主引用文献 Hybrid cluster proteins (HCPs) from Desulfovibrio desulfuricans ATCC 27774 and Desulfovibrio vulgaris (Hildenborough): X-ray structures at 1.25 A resolution using synchrotron radiation. J. Biol. Inorg. Chem., 7, 2002
3BZ5	Functional domain of InlJ from Listeria monocytogenes includes a cysteine ladder 分子名称: CHLORIDE ION, Internalin-J, SULFATE ION 著者 Bublitz, M, Holland, C, Sabet, C, Reichelt, J, Cossart, P, Heinz, D.W, Bierne, H, Schubert, W.D. 登録日 2008-01-17 公開日 2008-06-17 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Crystal structure and standardized geometric analysis of InlJ, a listerial virulence factor and leucine-rich repeat protein with a novel cysteine ladder. J.Mol.Biol., 378, 2008
1S5I	Fab (LNKB-2) of monoclonal antibody to Human Interleukin-2, crystal structure 分子名称: Fab-fragment of monoclonal antibody 著者 Pletnev, V.Z, Goryacheva, E.A, Tsygannik, I.N, Nesmeyanov, V.A, Pletnev, S.V, Pangborn, W, Duax, W. 登録日 2004-01-21 公開日 2004-05-25 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 [A new crystal form of the Fab fragment of a monoclonal antibody to human interleukin-2: the three-dimensional structure at 2.7 A resolution]. Bioorg. Khim., 30
1TQ1	Solution structure of At5g66040, a putative protein from Arabidosis Thaliana 分子名称: senescence-associated family protein 著者 Cornilescu, C.C, Cornilescu, G, Singh, S, Lee, M.S, Tyler, E.M, Shahan, M.N, Vinarov, D, Markley, J.L, Center for Eukaryotic Structural Genomics (CESG) 登録日 2004-06-16 公開日 2004-06-29 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Solution structure of a single-domain thiosulfate sulfurtransferase from Arabidopsis thaliana. Protein Sci., 15, 2006
1UWW	X-ray crystal structure of a non-crystalline cellulose specific carbohydrate-binding module: CBM28. 分子名称: CALCIUM ION, ENDOGLUCANASE 著者 Jamal, S, Nurizzo, D, Boraston, A, Davies, G.J. 登録日 2004-02-12 公開日 2004-05-13 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 X-Ray Crystal Structure of a Non-Crystalline Cellulose-Specific Carbohydrate-Binding Module: Cbm28 J.Mol.Biol., 339, 2004
2EW7	Crystal Structure of Helicobacter Pylori peptide deformylase 分子名称: COBALT (II) ION, peptide deformylase 著者 Cai, J. 登録日 2005-11-02 公開日 2006-10-24 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Peptide deformylase is a potential target for anti-Helicobacter pylori drugs: reverse docking, enzymatic assay, and X-ray crystallography validation Protein Sci., 15, 2006
2EW6	Structure of Helicobacter Pylori peptide deformylase in complex with inhibitor 分子名称: (2E)-3-(3,4-DIHYDROXYPHENYL)-N-[2-(4-HYDROXYPHENYL)ETHYL]ACRYLAMIDE, COBALT (II) ION, peptide deformylase 著者 Cai, J. 登録日 2005-11-02 公開日 2006-10-24 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Peptide deformylase is a potential target for anti-Helicobacter pylori drugs: reverse docking, enzymatic assay, and X-ray crystallography validation Protein Sci., 15, 2006
2EW5	Structure of Helicobacter Pylori peptide deformylase in complex with inhibitor 分子名称: 4-{(1E)-3-OXO-3-[(2-PHENYLETHYL)AMINO]PROP-1-EN-1-YL}-1,2-PHENYLENE DIACETATE, COBALT (II) ION, peptide deformylase 著者 Cai, J. 登録日 2005-11-02 公開日 2006-10-24 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Peptide deformylase is a potential target for anti-Helicobacter pylori drugs: reverse docking, enzymatic assay, and X-ray crystallography validation Protein Sci., 15, 2006
2MCF	NMR structure of TGAM_1934 分子名称: TGAM_1934 著者 Yang, Y, Montet de Guillen, K, Roumestand, C. 登録日 2013-08-19 公開日 2014-09-03 最終更新日 2023-06-14 実験手法 SOLUTION NMR 主引用文献 Prioritizing targets for structural biology through the lens of proteomics: the archaeal protein TGAM_1934 from Thermococcus gammatolerans. Proteomics, 15, 2015
2OUL	The Structure of Chagasin in Complex with a Cysteine Protease Clarifies the Binding Mode and Evolution of a New Inhibitor Family 分子名称: Chagasin, Falcipain 2 著者 Wang, S.X, Chand, K, Huang, R, Whisstock, J, Jacobelli, J, Fletterick, R.J, Rosenthal, P.J, McKerrow, J.H. 登録日 2007-02-11 公開日 2008-02-26 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 The structure of chagasin in complex with a cysteine protease clarifies the binding mode and evolution of an inhibitor family. Structure, 15, 2007
2PK8	Crystal structure of an uncharacterized protein PF0899 from Pyrococcus furiosus 分子名称: GOLD (I) CYANIDE ION, Uncharacterized protein PF0899 著者 Liu, Z.J, Tempel, W, Chen, L, Shah, A, Lee, D, Clancy-Kelley, L.L, Dillard, B.D, Rose, J.P, Sugar, F.J, Jenny Jr, F.E, Lee, H.S, Izumi, M, Shah, C, Poole III, F.L, Adams, M.W.W, Richardson, J.S, Richardson, D.C, Wang, B.-C, Southeast Collaboratory for Structural Genomics (SECSG) 登録日 2007-04-17 公開日 2007-05-22 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Structure of the hypothetical protein PF0899 from Pyrococcus furiosus at 1.85 A resolution. Acta Crystallogr.,Sect.F, 63, 2007
2MA2	Solution structure of RasGRP2 EF hands bound to calcium 分子名称: RAS guanyl-releasing protein 2 著者 Kuriyan, J, Iwig, J, Vercoulen, Y, Das, R, Barros, T, Limnander, A, Che, Y, Pelton, J, Wemmer, D, Roose, J. 登録日 2013-06-24 公開日 2013-08-21 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Structural analysis of autoinhibition in the Ras-specific exchange factor RasGRP1. Elife, 2, 2013
7DBN	HIV-1 reverse transcriptase mutant Q151M/Y115F/F116Y/M184V/F160M:DNA:dCTP ternary complex 分子名称: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, DNA/RNA (38-MER), GLYCEROL, ... 著者 Yasutake, Y, Hattori, S.I, Tamura, N, Maeda, K. 登録日 2020-10-21 公開日 2021-08-04 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.67 Å) 主引用文献 Biochemical and Structural Properties of Entecavir-Resistant Hepatitis B Virus Polymerase with L180M/M204V Mutations. J.Virol., 95, 2021
7DBM	HIV-1 reverse transcriptase mutant Q151M/Y115F/F116Y/M184V:DNA:dGTP ternary complex 分子名称: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, DNA/RNA (38-MER), GLYCEROL, ... 著者 Yasutake, Y, Hattori, S.I, Tamura, N, Maeda, K. 登録日 2020-10-21 公開日 2021-08-04 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.43 Å) 主引用文献 Biochemical and Structural Properties of Entecavir-Resistant Hepatitis B Virus Polymerase with L180M/M204V Mutations. J.Virol., 95, 2021
5Q0K	Ligand binding to FARNESOID-X-RECEPTOR 分子名称: Bile acid receptor, COACTIVATOR PEPTIDE SRC-1 HD3 著者 Rudolph, M.G, Benz, J, Burger, D, Thoma, R, Ruf, A, Joseph, C, Kuhn, B, Shao, C, Yang, H, Burley, S.K. 登録日 2017-05-31 公開日 2017-07-05 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 D3R Grand Challenge 2: blind prediction of protein-ligand poses, affinity rankings, and relative binding free energies. J. Comput. Aided Mol. Des., 32, 2018
5Q0V	Ligand binding to FARNESOID-X-RECEPTOR 分子名称: (2S)-2-[2-(4-chlorophenyl)-5,6-difluoro-1H-benzimidazol-1-yl]-2-cyclohexyl-N-(2-fluorophenyl)acetamide, Bile acid receptor, COACTIVATOR PEPTIDE SRC-1 HD3 著者 Rudolph, M.G, Benz, J, Burger, D, Thoma, R, Ruf, A, Joseph, C, Kuhn, B, Shao, C, Yang, H, Burley, S.K. 登録日 2017-05-31 公開日 2017-07-05 最終更新日 2021-11-17 実験手法 X-RAY DIFFRACTION (1.87 Å) 主引用文献 D3R Grand Challenge 2: blind prediction of protein-ligand poses, affinity rankings, and relative binding free energies. J. Comput. Aided Mol. Des., 32, 2018
5Q1A	Ligand binding to FARNESOID-X-RECEPTOR 分子名称: (2S)-2-cyclohexyl-2-[2-(2,4-dimethoxyphenyl)-1H-benzimidazol-1-yl]-N-(2,6-dimethylphenyl)acetamide, Bile acid receptor, COACTIVATOR PEPTIDE SRC-1 HD3 著者 Rudolph, M.G, Benz, J, Burger, D, Thoma, R, Ruf, A, Joseph, C, Kuhn, B, Shao, C, Yang, H, Burley, S.K. 登録日 2017-05-31 公開日 2017-07-05 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 D3R Grand Challenge 2: blind prediction of protein-ligand poses, affinity rankings, and relative binding free energies. J. Comput. Aided Mol. Des., 32, 2018
5Q0P	Ligand binding to FARNESOID-X-RECEPTOR 分子名称: 4-{(2S)-2-[2-(4-chlorophenyl)-5,6-difluoro-1H-benzimidazol-1-yl]-2-cyclohexylethoxy}benzoic acid, Bile acid receptor, COACTIVATOR PEPTIDE SRC-1 HD3 著者 Rudolph, M.G, Benz, J, Burger, D, Thoma, R, Ruf, A, Joseph, C, Kuhn, B, Shao, C, Yang, H, Burley, S.K. 登録日 2017-05-31 公開日 2017-07-05 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 D3R Grand Challenge 2: blind prediction of protein-ligand poses, affinity rankings, and relative binding free energies. J. Comput. Aided Mol. Des., 32, 2018

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