PDB: 13252 件ウェブページステータス検索Chemie searchBIRD

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6UEN	Cryo-EM structure of the respiratory syncytial virus RNA polymerase 分子名称: RNA-directed RNA polymerase L, the phosphoprotein (P) of human respiratory syncytial virus 著者 Cao, D, Gao, Y, Liang, B. 登録日 2019-09-22 公開日 2020-01-22 最終更新日 2024-03-20 実験手法 ELECTRON MICROSCOPY (3.67 Å) 主引用文献 Cryo-EM structure of the respiratory syncytial virus RNA polymerase. Nat Commun, 11, 2020
4XSZ	Crystal structure of CBR 9393 bound to Escherichia coli RNA polymerase holoenzyme 分子名称: 4-[3-(4-fluorophenyl)-1H-pyrazol-4-yl]-N-[2-(piperazin-1-yl)ethyl]-2-(trifluoromethyl)aniline, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ... 著者 Bae, B, Darst, S.A. 登録日 2015-01-22 公開日 2015-07-22 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (3.683 Å) 主引用文献 CBR antimicrobials inhibit RNA polymerase via at least two bridge-helix cap-mediated effects on nucleotide addition. Proc.Natl.Acad.Sci.USA, 112, 2015
4XSY	Crystal structure of CBR 9379 bound to Escherichia coli RNA polymerase holoenzyme 分子名称: 3-{[(2,6-dichlorophenyl)carbamoyl]amino}-N-hydroxy-N'-phenyl-5-(trifluoromethyl)benzenecarboximidamide, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ... 著者 Bae, B, Darst, S.A. 登録日 2015-01-22 公開日 2015-07-22 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (4.007 Å) 主引用文献 CBR antimicrobials inhibit RNA polymerase via at least two bridge-helix cap-mediated effects on nucleotide addition. Proc.Natl.Acad.Sci.USA, 112, 2015
4XSX	Crystal structure of CBR 703 bound to Escherichia coli RNA polymerase holoenzyme 分子名称: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ... 著者 Bae, B, Darst, S.A. 登録日 2015-01-22 公開日 2015-07-22 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (3.708 Å) 主引用文献 CBR antimicrobials inhibit RNA polymerase via at least two bridge-helix cap-mediated effects on nucleotide addition. Proc.Natl.Acad.Sci.USA, 112, 2015
3H0G	RNA Polymerase II from Schizosaccharomyces pombe 分子名称: DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, DNA-directed RNA polymerase II subunit RPB3, ... 著者 Spahr, H, Calero, G, Bushnell, D.A, Kornberg, R.D. 登録日 2009-04-09 公開日 2009-08-25 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (3.65 Å) 主引用文献 Schizosacharomyces pombe RNA polymerase II at 3.6-A resolution. Proc.Natl.Acad.Sci.USA, 106, 2009
7NVU	RNA polymerase II core pre-initiation complex with open promoter DNA 分子名称: DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit F, DNA-directed RNA polymerase II subunit RPB3, ... 著者 Aibara, S, Schilbach, S, Cramer, P. 登録日 2021-03-16 公開日 2021-05-05 最終更新日 2024-07-10 実験手法 ELECTRON MICROSCOPY (2.5 Å) 主引用文献 Structures of mammalian RNA polymerase II pre-initiation complexes. Nature, 594, 2021
7NVT	RNA polymerase II core pre-initiation complex with closed promoter DNA in distal position 分子名称: DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit F, DNA-directed RNA polymerase II subunit RPB3, ... 著者 Aibara, S, Schilbach, S, Cramer, P. 登録日 2021-03-16 公開日 2021-05-05 最終更新日 2024-07-10 実験手法 ELECTRON MICROSCOPY (2.9 Å) 主引用文献 Structures of mammalian RNA polymerase II pre-initiation complexes. Nature, 594, 2021
7NVS	RNA polymerase II core pre-initiation complex with closed promoter DNA in proximal position 分子名称: DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit F, DNA-directed RNA polymerase II subunit RPB3, ... 著者 Aibara, S, Schilbach, S, Cramer, P. 登録日 2021-03-16 公開日 2021-05-05 最終更新日 2024-07-10 実験手法 ELECTRON MICROSCOPY (2.8 Å) 主引用文献 Structures of mammalian RNA polymerase II pre-initiation complexes. Nature, 594, 2021
8S5N	RNA polymerase II core initially transcribing complex with an ordered RNA of 12 nt 分子名称: DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit RPB11-a, DNA-directed RNA polymerase II subunit RPB3, ... 著者 Zhan, Y, Grabbe, F, Oberbeckmann, E, Dienemann, C, Cramer, P. 登録日 2024-02-24 公開日 2024-04-10 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Three-step mechanism of promoter escape by RNA polymerase II. Mol.Cell, 84, 2024
8S51	RNA polymerase II core initially transcribing complex with an ordered RNA of 8 nt 分子名称: DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit RPB11-a, DNA-directed RNA polymerase II subunit RPB3, ... 著者 Zhan, Y, Grabbe, F, Oberbeckmann, E, Dienemann, C, Cramer, P. 登録日 2024-02-22 公開日 2024-04-17 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Three-step mechanism of promoter escape by RNA polymerase II. Mol.Cell, 84, 2024
8S52	RNA polymerase II core initially transcribing complex with an ordered RNA of 10 nt 分子名称: DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit RPB11-a, DNA-directed RNA polymerase II subunit RPB3, ... 著者 Zhan, Y, Grabbe, F, Oberbeckmann, E, Dienemann, C, Cramer, P. 登録日 2024-02-22 公開日 2024-04-17 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (2.9 Å) 主引用文献 Three-step mechanism of promoter escape by RNA polymerase II. Mol.Cell, 84, 2024
7ROZ	Structure of RNA-dependent RNA polymerase 2 (RDR2) from Arabidopsis thaliana 分子名称: MAGNESIUM ION, RNA-dependent RNA polymerase 2 著者 Fukudome, A, Pikaard, C.S, Takagi, Y. 登録日 2021-08-02 公開日 2021-12-08 最終更新日 2024-06-05 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Structure and RNA template requirements of Arabidopsis RNA-DEPENDENT RNA POLYMERASE 2. Proc.Natl.Acad.Sci.USA, 118, 2021
7RQS	Arabidopsis RNA-dependent RNA polymerase 2 分子名称: MAGNESIUM ION, RNA-dependent RNA polymerase 2 著者 Fukudome, A, Pikaard, C.S, Takagi, Y. 登録日 2021-08-07 公開日 2021-12-08 最終更新日 2024-06-05 実験手法 ELECTRON MICROSCOPY (3.57 Å) 主引用文献 Structure and RNA template requirements of Arabidopsis RNA-DEPENDENT RNA POLYMERASE 2. Proc.Natl.Acad.Sci.USA, 118, 2021
4A3I	RNA Polymerase II binary complex with DNA 分子名称: 5'-D(*GP*GP*CP*AP*CP*AP*AP*CP*TP*GP*CP*GP*GP*CP*T)-3', DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB11, ... 著者 Cheung, A.C.M, Sainsbury, S, Cramer, P. 登録日 2011-09-30 公開日 2012-02-08 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (3.8 Å) 主引用文献 Structural basis of initial RNA polymerase II transcription. EMBO J., 30, 2011
8S54	RNA polymerase II early elongation complex bound to TFIIE and TFIIF - state b (composite structure) 分子名称: DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit RPB11-a, DNA-directed RNA polymerase II subunit RPB3, ... 著者 Zhan, Y, Grabber, F, Oberbeckmann, E, Dienemann, C, Cramer, P. 登録日 2024-02-22 公開日 2024-04-17 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Three-step mechanism of promoter escape by RNA polymerase II. Mol.Cell, 84, 2024
4A3E	RNA Polymerase II initial transcribing complex with a 5nt DNA-RNA hybrid and soaked with AMPCPP 分子名称: DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB11, ... 著者 Cheung, A.C.M, Sainsbury, S, Cramer, P. 登録日 2011-09-30 公開日 2011-12-07 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (3.4 Å) 主引用文献 Structural basis of initial RNA polymerase II transcription. EMBO J., 30, 2011
4A3M	RNA Polymerase II initial transcribing complex with a 4nt DNA-RNA hybrid and soaked with AMPCPP 分子名称: 5'-D(*AP*AP*GP*TP*AP*CP*TP)-3', 5'-D(*AP*GP*CP*TP*CP*AP*AP*GP*TP*AP*CP*TP*TP*TP* TP*TP*CP*CP*BRUP*GP*GP*TP*CP*AP*TP*T)-3', 5'-R(*AP*GP*GP*A)-3', ... 著者 Cheung, A.C.M, Sainsbury, S, Cramer, P. 登録日 2011-09-30 公開日 2011-12-07 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (3.9 Å) 主引用文献 Structural basis of initial RNA polymerase II transcription. EMBO J., 30, 2011
4A3F	RNA Polymerase II initial transcribing complex with a 6nt DNA-RNA hybrid and soaked with AMPCPP 分子名称: 5'-D(*AP*GP*CP*TP*CP*AP*AP*GP*TP*AP*CP*TP*TP*DTP *TP*TP*CP*C BRU*GP*GP*TP*CP*AP*TP*T)-3', DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1, ... 著者 Cheung, A.C.M, Sainsbury, S, Cramer, P. 登録日 2011-09-30 公開日 2011-12-07 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (3.5 Å) 主引用文献 Structural basis of initial RNA polymerase II transcription. EMBO J., 30, 2011
4A3J	RNA Polymerase II initial transcribing complex with a 2nt DNA-RNA hybrid and soaked with GMPCPP 分子名称: 5'-D(*AP*GP*CP*TP*AP*GP*CP*TP*TP*TP*CP*BRUP*AP*CP*CP *TP*GP*AP*AP*CP*AP*AP*CP*TP*AP*AP*CP)-3', 5'-D(*GP*TP*AP*GP*AP*AP*AP*GP*CP*TP*AP*GP*CP*TP)-3', 5'-R(*CP*AP)-3', ... 著者 Cheung, A.C.M, Sainsbury, S, Cramer, P. 登録日 2011-09-30 公開日 2011-12-07 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (3.7 Å) 主引用文献 Structural Basis of Initial RNA Polymerase II Transcription. Embo J., 30, 2011
4A3B	RNA Polymerase II initial transcribing complex with a 4nt DNA-RNA hybrid 分子名称: DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB11, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB2, ... 著者 Cheung, A.C.M, Sainsbury, S, Cramer, P. 登録日 2011-09-30 公開日 2011-12-07 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (3.5 Å) 主引用文献 Structural basis of initial RNA polymerase II transcription. EMBO J., 30, 2011
8S55	RNA polymerase II early elongation complex bound to TFIIE and TFIIF - state a (composite structure) 分子名称: DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit RPB11-a, DNA-directed RNA polymerase II subunit RPB3, ... 著者 Zhan, Y, Grabbe, F, Oberbeckmann, E, Dienemann, C, Cramer, P. 登録日 2024-02-22 公開日 2024-04-17 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Three-step mechanism of promoter escape by RNA polymerase II. Mol.Cell, 84, 2024
4A3K	RNA Polymerase II initial transcribing complex with a 7nt DNA-RNA hybrid 分子名称: 5'-D(*AP*GP*CP*TP*CP*AP*AP*GP*TP*AP*CP*TP*TP*DTP *TP*TP*CP*CP*BRU*GP*GP*TP*CP*AP*TP*T)-3', 5'-D(*TP*AP*AP*GP*TP*AP*CP*TP*TP*GP*AP)-3', 5'-R(*AP*CP*CP*AP*GP*GP*AP)-3', ... 著者 Cheung, A.C.M, Sainsbury, S, Cramer, P. 登録日 2011-09-30 公開日 2011-12-07 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (3.5 Å) 主引用文献 Structural Basis of Initial RNA Polymerase II Transcription. Embo J., 30, 2011
4A3L	RNA Polymerase II initial transcribing complex with a 7nt DNA-RNA hybrid and soaked with AMPCPP 分子名称: 5'-D(*AP*AP*GP*TP*AP*CP*TP)-3', 5'-D(*AP*GP*CP*TP*CP*AP*AP*GP*TP*AP*CP*TP*TP*TP *TP*TP*CP*CP*BRU*GP*GP*TP*CP*AP*TP*T)-3', 5'-R(*AP*CP*CP*AP*GP*GP*AP)-3', ... 著者 Cheung, A.C.M, Sainsbury, S, Cramer, P. 登録日 2011-09-30 公開日 2011-12-07 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (3.5 Å) 主引用文献 Structural basis of initial RNA polymerase II transcription. EMBO J., 30, 2011
4A3C	RNA Polymerase II initial transcribing complex with a 5nt DNA-RNA hybrid 分子名称: DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB11, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB2, ... 著者 Cheung, A.C.M, Sainsbury, S, Cramer, P. 登録日 2011-09-30 公開日 2011-11-16 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (3.5 Å) 主引用文献 Structural basis of initial RNA polymerase II transcription. EMBO J., 30, 2011
4A3D	RNA Polymerase II initial transcribing complex with a 6nt DNA-RNA hybrid 分子名称: DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB11, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB2, ... 著者 Cheung, A.C.M, Sainsbury, S, Cramer, P. 登録日 2011-09-30 公開日 2011-12-07 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (3.4 Å) 主引用文献 Structural basis of initial RNA polymerase II transcription. EMBO J., 30, 2011

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