PDB: 470 件ウェブページステータス検索Chemie searchBIRD

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5X51	RNA Polymerase II from Komagataella Pastoris (Type-3 crystal) 分子名称: DNA-directed RNA polymerase subunit, DNA-directed RNA polymerase subunit beta, RNA polymerase II subunit, ... 著者 Ehara, H, Umehara, T, Sekine, S, Yokoyama, S. 登録日 2017-02-14 公開日 2017-05-17 実験手法 X-RAY DIFFRACTION (6.996 Å) 主引用文献 Crystal structure of RNA polymerase II from Komagataella pastoris Biochem. Biophys. Res. Commun., 487, 2017
5XJC	Cryo-EM structure of the human spliceosome just prior to exon ligation at 3.6 angstrom 分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ... 著者 Zhang, X, Yan, C, Hang, J, Finci, I.L, Lei, J, Shi, Y. 登録日 2017-04-30 公開日 2017-07-05 最終更新日 2020-10-14 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 An Atomic Structure of the Human Spliceosome Cell, 169, 2017
5XON	RNA Polymerase II elongation complex bound with Spt4/5 and TFIIS 分子名称: DNA (48-MER), DNA-directed RNA polymerase subunit, DNA-directed RNA polymerase subunit beta, ... 著者 Ehara, H, Yokoyama, T, Shigematsu, H, Shirouzu, M, Sekine, S. 登録日 2017-05-29 公開日 2017-08-16 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (3.83 Å) 主引用文献 Structure of the complete elongation complex of RNA polymerase II with basal factors Science, 357, 2017
5X4Z	RNA Polymerase II from Komagataella Pastoris (Type-1 crystal) 分子名称: DNA-directed RNA polymerase subunit, DNA-directed RNA polymerase subunit beta, RNA polymerase II subunit, ... 著者 Ehara, H, Umehara, T, Sekine, S, Yokoyama, S. 登録日 2017-02-14 公開日 2017-05-17 実験手法 X-RAY DIFFRACTION (7.8 Å) 主引用文献 Crystal structure of RNA polymerase II from Komagataella pastoris Biochem. Biophys. Res. Commun., 487, 2017
5X8R	Structure of the 30S small subunit of chloroplast ribosome from spinach 分子名称: 16S rRNA, 30S ribosomal protein S1, chloroplastic, ... 著者 Ahmed, T, Shi, J, Bhushan, S. 登録日 2017-03-03 公開日 2017-06-07 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (3.7 Å) 主引用文献 Unique localization of the plastid-specific ribosomal proteins in the chloroplast ribosome small subunit provides mechanistic insights into the chloroplastic translation Nucleic Acids Res., 45, 2017
5X8P	Structure of the 70S chloroplast ribosome from spinach 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S1, ... 著者 Ahmed, T, Shi, J, Bhushan, S. 登録日 2017-03-03 公開日 2017-06-14 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Unique localization of the plastid-specific ribosomal proteins in the chloroplast ribosome small subunit provides mechanistic insights into the chloroplastic translation Nucleic Acids Res., 45, 2017
5XOG	RNA Polymerase II elongation complex bound with Spt5 KOW5 and Elf1 分子名称: DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, DNA (30-MER), DNA (39-MER), ... 著者 Ehara, H, Shirouzu, M, Sekine, S. 登録日 2017-05-28 公開日 2017-08-16 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Structure of the complete elongation complex of RNA polymerase II with basal factors Science, 357, 2017
5YLZ	Cryo-EM Structure of the Post-catalytic Spliceosome from Saccharomyces cerevisiae at 3.6 angstrom 分子名称: GUANOSINE-5'-TRIPHOSPHATE, INOSITOL HEXAKISPHOSPHATE, MAGNESIUM ION, ... 著者 Wan, R, Yan, C, Bai, R, Lei, J, Shi, Y. 登録日 2017-10-20 公開日 2018-07-18 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Structure of the Post-catalytic Spliceosome from Saccharomyces cerevisiae Cell, 171, 2017
5YJJ	Crystal structure of PNPase from Staphylococcus epidermidis 分子名称: MAGNESIUM ION, PHOSPHATE ION, Polyribonucleotide nucleotidyltransferase 著者 Raj, R, Gopal, B. 登録日 2017-10-10 公開日 2018-01-31 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Characterization of Staphylococcus epidermidis Polynucleotide phosphorylase and its interactions with ribonucleases RNase J1 and RNase J2. Biochem. Biophys. Res. Commun., 495, 2018
5WLC	The complete structure of the small subunit processome 分子名称: 18S pre-rRNA, 5' ETS, Bms1, ... 著者 Barandun, J, Chaker-Margot, M, Hunziker, M, Klinge, S. 登録日 2017-07-26 公開日 2017-09-27 最終更新日 2024-03-13 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 The complete structure of the small-subunit processome. Nat. Struct. Mol. Biol., 24, 2017
5WYJ	Cryo-EM structure of the 90S small subunit pre-ribosome (Dhr1-depleted, Enp1-TAP, state 1) 分子名称: 13 kDa ribonucleoprotein-associated protein, 18S ribosomal RNA, 40S ribosomal protein S1-A, ... 著者 Ye, K, Zhu, X, Sun, Q. 登録日 2017-01-13 公開日 2017-03-29 最終更新日 2019-10-09 実験手法 ELECTRON MICROSCOPY (8.7 Å) 主引用文献 Molecular architecture of the 90S small subunit pre-ribosome. Elife, 6, 2017
5IYA	Human core-PIC in the closed state 分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB10, DNA-directed RNA polymerase II subunit RPB11-a, ... 著者 He, Y, Yan, C, Fang, J, Inouye, C, Tjian, R, Ivanov, I, Nogales, E. 登録日 2016-03-24 公開日 2016-05-18 最終更新日 2019-11-20 実験手法 ELECTRON MICROSCOPY (5.4 Å) 主引用文献 Near-atomic resolution visualization of human transcription promoter opening. Nature, 533, 2016
5IY8	Human holo-PIC in the initial transcribing state 分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB10, DNA-directed RNA polymerase II subunit RPB11-a, ... 著者 He, Y, Yan, C, Fang, J, Inouye, C, Tjian, R, Ivanov, I, Nogales, E. 登録日 2016-03-24 公開日 2016-05-18 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (7.9 Å) 主引用文献 Near-atomic resolution visualization of human transcription promoter opening. Nature, 533, 2016
5IY6	Human holo-PIC in the closed state 分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB10, DNA-directed RNA polymerase II subunit RPB11-a, ... 著者 He, Y, Yan, C, Fang, J, Inouye, C, Tjian, R, Ivanov, I, Nogales, E. 登録日 2016-03-24 公開日 2016-05-18 最終更新日 2019-11-20 実験手法 ELECTRON MICROSCOPY (7.2 Å) 主引用文献 Near-atomic resolution visualization of human transcription promoter opening. Nature, 533, 2016
7AJU	Cryo-EM structure of the 90S-exosome super-complex (state Post-A1-exosome) 分子名称: 13 kDa ribonucleoprotein-associated protein, 18S rRNA, 40S ribosomal protein S1-A, ... 著者 Cheng, J, Lau, B, Flemming, D, Venuta, G.L, Berninghausen, O, Beckmann, R, Hurt, E. 登録日 2020-09-29 公開日 2020-12-30 最終更新日 2024-05-01 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Structure of the Maturing 90S Pre-ribosome in Association with the RNA Exosome. Mol.Cell, 81, 2021
5IY9	Human holo-PIC in the initial transcribing state (no IIS) 分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB10, DNA-directed RNA polymerase II subunit RPB11-a, ... 著者 He, Y, Yan, C, Fang, J, Inouye, C, Tjian, R, Ivanov, I, Nogales, E. 登録日 2016-03-24 公開日 2016-05-18 最終更新日 2019-11-20 実験手法 ELECTRON MICROSCOPY (6.3 Å) 主引用文献 Near-atomic resolution visualization of human transcription promoter opening. Nature, 533, 2016
5IYC	Human core-PIC in the initial transcribing state 分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB10, DNA-directed RNA polymerase II subunit RPB11-a, ... 著者 He, Y, Yan, C, Fang, J, Inouye, C, Tjian, R, Ivanov, I, Nogales, E. 登録日 2016-03-24 公開日 2016-05-18 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (3.9 Å) 主引用文献 Near-atomic resolution visualization of human transcription promoter opening. Nature, 533, 2016
5JBH	Cryo-EM structure of a full archaeal ribosomal translation initiation complex in the P-IN conformation 分子名称: 16S ribosomal RNA, 30S ribosomal protein SX, 30S ribosomal protein eL41, ... 著者 Coureux, P.-D, Schmitt, E, Mechulam, Y. 登録日 2016-04-13 公開日 2016-12-07 最終更新日 2024-06-12 実験手法 ELECTRON MICROSCOPY (5.34 Å) 主引用文献 Cryo-EM study of start codon selection during archaeal translation initiation. Nat Commun, 7, 2016
7ASE	43S preinitiation complex from Trypanosoma cruzi with the kDDX60 helicase 分子名称: 18S, 40S ribosomal protein S10, putative, ... 著者 Bochler, A, Brito Querido, J, Prilepskaja, T, Soufari, H, Del Cistia, M.L, Kuhn, L, Rimoldi Ribeiro, A, Valasek, L.S, Hashem, Y. 登録日 2020-10-27 公開日 2021-04-14 最終更新日 2021-04-21 実験手法 ELECTRON MICROSCOPY (3.33 Å) 主引用文献 Structural Differences in Translation Initiation between Pathogenic Trypanosomatids and Their Mammalian Hosts. Cell Rep, 33, 2020
3JAP	Structure of a partial yeast 48S preinitiation complex in closed conformation 分子名称: 18S rRNA, MAGNESIUM ION, METHIONINE, ... 著者 Llacer, J.L, Hussain, T, Ramakrishnan, V. 登録日 2015-06-18 公開日 2015-08-12 最終更新日 2024-02-21 実験手法 ELECTRON MICROSCOPY (4.9 Å) 主引用文献 Conformational Differences between Open and Closed States of the Eukaryotic Translation Initiation Complex. Mol.Cell, 59, 2015
5IYB	Human core-PIC in the open state 分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB10, DNA-directed RNA polymerase II subunit RPB11-a, ... 著者 He, Y, Yan, C, Fang, J, Inouye, C, Tjian, R, Ivanov, I, Nogales, E. 登録日 2016-03-24 公開日 2016-05-18 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (3.9 Å) 主引用文献 Near-atomic resolution visualization of human transcription promoter opening. Nature, 533, 2016
5JB3	Cryo-EM structure of a full archaeal ribosomal translation initiation complex in the P-REMOTE conformation 分子名称: 16S ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ... 著者 Coureux, P.-D, Schmitt, E, Mechulam, Y. 登録日 2016-04-13 公開日 2016-11-30 最終更新日 2019-12-11 実験手法 ELECTRON MICROSCOPY (5.34 Å) 主引用文献 Cryo-EM study of start codon selection during archaeal translation initiation. Nat Commun, 7, 2016
6ZQC	Cryo-EM structure of the 90S pre-ribosome from Saccharomyces cerevisiae, state Pre-A1 分子名称: 13 kDa ribonucleoprotein-associated protein, 18S rRNA, 40S ribosomal protein S1-A, ... 著者 Cheng, J, Lau, B, Venuta, G.L, Berninghausen, O, Hurt, E, Beckmann, R. 登録日 2020-07-09 公開日 2020-09-23 最終更新日 2024-05-01 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 90 S pre-ribosome transformation into the primordial 40 S subunit. Science, 369, 2020
3K1F	Crystal structure of RNA Polymerase II in complex with TFIIB 分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ... 著者 Kostrewa, D, Zeller, M.E, Armache, K.-J, Seizl, M, Leike, K, Thomm, M, Cramer, P. 登録日 2009-09-27 公開日 2009-11-10 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (4.3 Å) 主引用文献 RNA polymerase II-TFIIB structure and mechanism of transcription initiation. Nature, 462, 2009
6ZTJ	E. coli 70S-RNAP expressome complex in NusG-coupled state (38 nt intervening mRNA) 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S1, ... 著者 Webster, M.W, Takacs, M, Weixlbaumer, A. 登録日 2020-07-20 公開日 2020-09-16 最終更新日 2024-04-24 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Structural basis of transcription-translation coupling and collision in bacteria. Science, 369, 2020

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