Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 567 件

4J9Y
DownloadVisualize
BU of 4j9y by Molmil
Calcium-calmodulin complexed with the calmodulin binding domain from a small conductance potassium channel splice variant
分子名称: CALCIUM ION, Calmodulin, GLYCEROL, ...
著者Zhang, M, Pascal, J.M, Zhang, J.-F.
登録日2013-02-17
公開日2013-03-27
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.51 Å)
主引用文献Unstructured to structured transition of an intrinsically disordered protein peptide in coupling Ca2+-sensing and SK channel activation.
Proc.Natl.Acad.Sci.USA, 110, 2013
5MAD
DownloadVisualize
BU of 5mad by Molmil
GFP-binding DARPin 3G61
分子名称: 3G61, DI(HYDROXYETHYL)ETHER, Green fluorescent protein, ...
著者Hansen, S, Stueber, J, Ernst, P, Koch, A, Bojar, D, Batyuk, A, Plueckthun, A.
登録日2016-11-03
公開日2017-12-06
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.53 Å)
主引用文献Design and applications of a clamp for Green Fluorescent Protein with picomolar affinity.
Sci Rep, 7, 2017
5N9O
DownloadVisualize
BU of 5n9o by Molmil
EGFP(enhanced green fluorescent protein) mutant - L232H
分子名称: 3,6,9,12,15-PENTAOXAHEPTADECAN-1-OL, Green fluorescent protein
著者Kachalova, G.S, Popov, A.P, Simanovskaya, A.A, Krukova, M.V, Lipkin, A.V.
登録日2017-02-26
公開日2018-03-21
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.53 Å)
主引用文献Structure of EGFP(enhanced green fluorescent protein) mutant - L232H at 0.153 nm
To Be Published
3SV5
DownloadVisualize
BU of 3sv5 by Molmil
Engineered medium-affinity halide-binding protein derived from YFP: iodide complex
分子名称: 1,2-ETHANEDIOL, FORMIC ACID, Green fluorescent protein, ...
著者Wang, W, Grimley, J.S, Beese, L.S, Hellinga, H.W.
登録日2011-07-12
公開日2012-07-18
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.53 Å)
主引用文献Visualization of Synaptic Inhibition with an Optogenetic Sensor Developed by Cell-Free Protein Engineering Automation.
J.Neurosci., 33, 2013
8OVY
DownloadVisualize
BU of 8ovy by Molmil
Structure of analogue of superfolded GFP
分子名称: Green fluorescent protein
著者Dunkelmann, D, Fiedler, M, Bellini, D, Alvira, C.P, Chin, J.W.
登録日2023-04-26
公開日2024-01-10
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.537 Å)
主引用文献Adding alpha , alpha-disubstituted and beta-linked monomers to the genetic code of an organism.
Nature, 625, 2024
7A7K
DownloadVisualize
BU of 7a7k by Molmil
rsEGFP in the green-on state
分子名称: Green fluorescent protein, SULFATE ION
著者De Zitter, E, Dedecker, P, Van Meervelt, L.
登録日2020-08-30
公開日2021-02-17
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Structure-Function Dataset Reveals Environment Effects within a Fluorescent Protein Model System*.
Angew.Chem.Int.Ed.Engl., 60, 2021
4IK8
DownloadVisualize
BU of 4ik8 by Molmil
High resolution structure of GCaMP3 dimer form 1 at pH 7.5
分子名称: CALCIUM ION, RCaMP, Green fluorescent protein
著者Chen, Y, Song, X, Miao, L, Zhu, Y, Ji, G.
登録日2012-12-25
公開日2014-02-05
最終更新日2017-06-21
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Structural insight into enhanced calcium indicator GCaMP3 and GCaMPJ to promote further improvement.
Protein Cell, 4, 2013
1Q4C
DownloadVisualize
BU of 1q4c by Molmil
S65T Q80R T203C Green Fluorescent Protein (GFP) pH 8.5
分子名称: Green Fluorescent Protein
著者Jain, R.K, Ranganathan, R.
登録日2003-08-02
公開日2004-02-03
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Local complexity of amino acid interactions in a protein core.
Proc.Natl.Acad.Sci.USA, 101, 2004
7O7C
DownloadVisualize
BU of 7o7c by Molmil
Crystal structure of rsEGFP2 mutant V151A in the non-fluorescent off-state determined by synchrotron radiation at 100K
分子名称: Green fluorescent protein, SULFATE ION
著者Woodhouse, J, Adam, V, Hadjidemetriou, K, Colletier, J.-P, Weik, M.
登録日2021-04-13
公開日2022-07-27
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Rational Control of Off-State Heterogeneity in a Photoswitchable Fluorescent Protein Provides Switching Contrast Enhancement.
Chemphyschem, 23, 2022
5OX9
DownloadVisualize
BU of 5ox9 by Molmil
Structure of the Cyan Fluorescent Protein SCFP3A at pH 4.5
分子名称: CHLORIDE ION, Green fluorescent protein
著者Gotthard, G, von Stetten, D, Clavel, D, Noirclerc-Savoye, M, Royant, A.
登録日2017-09-06
公開日2017-11-29
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.56 Å)
主引用文献Chromophore Isomer Stabilization Is Critical to the Efficient Fluorescence of Cyan Fluorescent Proteins.
Biochemistry, 56, 2017
5MA9
DownloadVisualize
BU of 5ma9 by Molmil
GFP-binding DARPin fusion gc_R11
分子名称: 1,2-ETHANEDIOL, Green fluorescent protein, R11
著者Hansen, S, Stueber, J, Ernst, P, Koch, A, Bojar, D, Batyuk, A, Plueckthun, A.
登録日2016-11-03
公開日2017-11-08
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献Design and applications of a clamp for Green Fluorescent Protein with picomolar affinity.
Sci Rep, 7, 2017
4KA9
DownloadVisualize
BU of 4ka9 by Molmil
Crystal structure analysis of single amino acid deletion mutations in EGFP
分子名称: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Green fluorescent protein, ...
著者Arpino, J.A.J, Rizkallah, P.J.
登録日2013-04-22
公開日2014-05-07
最終更新日2015-11-25
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Random single amino acid deletion sampling unveils structural tolerance and the benefits of helical registry shift on GFP folding and structure.
Structure, 22, 2014
1Q4D
DownloadVisualize
BU of 1q4d by Molmil
S65T Q80R T203C Green Fluorescent Protein (GFP) pH 5.5
分子名称: Green Fluorescent Protein
著者Jain, R.K, Ranganathan, R.
登録日2003-08-02
公開日2004-02-03
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Local complexity of amino acid interactions in a protein core.
Proc.Natl.Acad.Sci.USA, 101, 2004
2YDZ
DownloadVisualize
BU of 2ydz by Molmil
X-ray structure of the cyan fluorescent protein SCFP3A (K206A mutant)
分子名称: GREEN FLUORESCENT PROTEIN
著者von Stetten, D, Goedhart, J, Noirclerc-Savoye, M, Lelimousin, M, Joosen, L, Hink, M.A, van Weeren, L, Gadella, T.W.J, Royant, A.
登録日2011-03-25
公開日2012-03-21
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.59 Å)
主引用文献Structure-Guided Evolution of Cyan Fluorescent Proteins Towards a Quantum Yield of 93%
Nat.Commun, 3, 2012
3DPW
DownloadVisualize
BU of 3dpw by Molmil
Structure of the Yellow Fluorescent Protein Citrine Frozen at 1 Atmosphere Number 1: Structure 1 in a Series of 26 High Pressure Structures
分子名称: Green fluorescent protein
著者Barstow, B, Kim, C.U.
登録日2008-07-09
公開日2008-09-23
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.59 Å)
主引用文献Alteration of citrine structure by hydrostatic pressure explains the accompanying spectral shift.
Proc.Natl.Acad.Sci.Usa, 105, 2008
2QLE
DownloadVisualize
BU of 2qle by Molmil
GFP/S205V mutant
分子名称: Green fluorescent protein, IMIDAZOLE
著者Shu, X, Remington, S.J.
登録日2007-07-12
公開日2008-02-12
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.59 Å)
主引用文献An alternative excited-state proton transfer pathway in green fluorescent protein variant S205V.
Protein Sci., 16, 2007
6DQ1
DownloadVisualize
BU of 6dq1 by Molmil
sfGFP N149 mutated to 4-nitro-L-phenylalanine
分子名称: SODIUM ION, sfGFP
著者Phillips-Piro, C.M, Savidge, N, Lee, B.
登録日2018-06-10
公開日2018-10-17
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.598 Å)
主引用文献Crystal structures of green fluorescent protein with the unnatural amino acid 4-nitro-L-phenylalanine.
Acta Crystallogr F Struct Biol Commun, 74, 2018
6OG8
DownloadVisualize
BU of 6og8 by Molmil
Crystal structure of Green Fluorescent Protein (GFP); S65T, H148D with globally incorporated 3-F1Y; circular permutant (50-51)
分子名称: Crystal structure of Green Fluorescent Protein (GFP); S65T, H148D with globally incorporated 3-F1Y; circular permutant (50-51)
著者Lin, C.-Y, Deng, A, Boxer, S.G.
登録日2019-04-01
公開日2020-04-08
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.599 Å)
主引用文献Unusual Spectroscopic and Electric Field Sensitivity of Chromophores with Short Hydrogen Bonds: GFP and PYP as Model Systems.
J.Phys.Chem.B, 124, 2020
6OGA
DownloadVisualize
BU of 6oga by Molmil
Crystal structure of Green Fluorescent Protein (GFP); S65T, Y66(3-Br1Y), H148D; circular permutant (50-51)
分子名称: ACETATE ION, Crystal structure of Green Fluorescent Protein (GFP); S65T, Y66(3-Br1Y), ...
著者Lin, C.-Y, Boxer, S.G.
登録日2019-04-02
公開日2020-04-08
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Unusual Spectroscopic and Electric Field Sensitivity of Chromophores with Short Hydrogen Bonds: GFP and PYP as Model Systems.
J.Phys.Chem.B, 124, 2020
4LQU
DownloadVisualize
BU of 4lqu by Molmil
1.60A resolution crystal structure of a superfolder green fluorescent protein (W57G) mutant
分子名称: Green fluorescent protein
著者Lovell, S, Xia, Y, Vo, B, Battaile, K.P, Egan, C, Karanicolas, J.
登録日2013-07-19
公開日2013-12-18
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献The designability of protein switches by chemical rescue of structure: mechanisms of inactivation and reactivation.
J.Am.Chem.Soc., 135, 2013
7SAH
DownloadVisualize
BU of 7sah by Molmil
Crystal Structure of LaG16 Nanobody bound to eGFP
分子名称: Green fluorescent protein, LaG16
著者Cong, A.T.Q, Schellenberg, M.J.
登録日2021-09-22
公開日2022-09-14
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献High-efficiency recombinant protein purification using mCherry and YFP nanobody affinity matrices.
Protein Sci., 31, 2022
5T3I
DownloadVisualize
BU of 5t3i by Molmil
cyan fluorescence protein soaked with selenourea for 5 min
分子名称: Green fluorescent protein, PHOSPHATE ION, selenourea
著者Luo, Z, Dauter, Z.
登録日2016-08-25
公開日2016-11-30
最終更新日2019-12-04
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Selenourea: a convenient phasing vehicle for macromolecular X-ray crystal structures.
Sci Rep, 6, 2016
2HGD
DownloadVisualize
BU of 2hgd by Molmil
Structure of S65A Y66F GFP variant with an oxidized chromophore
分子名称: Green fluorescent protein
著者Barondeau, D.P, Kassmann, C.J, Tainer, J.A, Getzoff, E.D.
登録日2006-06-26
公開日2007-03-27
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献The Case of the Missing Ring: Radical Cleavage of a Carbon-Carbon Bond and Implications for GFP Chromophore Biosynthesis
J.Am.Chem.Soc., 129, 2007
3DQ2
DownloadVisualize
BU of 3dq2 by Molmil
Structure of the Yellow Fluorescent Protein Citrine Frozen at 4000 Atmospheres Number 1: Structure 23 in a Series of 26 High Pressure Structures
分子名称: Green fluorescent protein
著者Barstow, B, Kim, C.U.
登録日2008-07-09
公開日2008-09-23
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Alteration of citrine structure by hydrostatic pressure explains the accompanying spectral shift.
Proc.Natl.Acad.Sci.Usa, 105, 2008
3DQ6
DownloadVisualize
BU of 3dq6 by Molmil
Structure of the Yellow Fluorescent Protein Citrine Frozen at 1920 Atmospheres Number 2: Structure 18 in a Series of 26 High Pressure Structures
分子名称: Green fluorescent protein
著者Barstow, B, Kim, C.U.
登録日2008-07-09
公開日2008-09-23
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Alteration of citrine structure by hydrostatic pressure explains the accompanying spectral shift.
Proc.Natl.Acad.Sci.Usa, 105, 2008

222415

件を2024-07-10に公開中

PDB statisticsPDBj update infoContact PDBjnumon