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PDB: 31 件
6LEW
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BU of 6lew by Molmil
RVD HA specifically contacts 5mC through van der Waals interactions
分子名称: DNA (5'-D(*TP*GP*TP*CP*CP*CP*TP*TP*(5CM)P*GP*CP*GP*TP*CP*TP*CP*T)-3'), DNA (5'-D(P*GP*AP*GP*AP*CP*GP*CP*GP*AP*AP*GP*GP*GP*AP*CP*A)-3'), TAL effector
著者Liu, L, Yi, C.
登録日2019-11-27
公開日2020-12-02
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.48 Å)
主引用文献RVD HA specifically contacts 5mC through van der Waals interactions
To Be Published
3UGM
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BU of 3ugm by Molmil
Structure of TAL effector PthXo1 bound to its DNA target
分子名称: DNA-1, DNA-2, TAL effector AvrBs3/PthA
著者Mak, A.N.S, Bradley, P, Cernadas, R.A, Bogdanove, A.J, Stoddard, B.L.
登録日2011-11-02
公開日2012-01-04
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献The Crystal Structure of TAL Effector PthXo1 Bound to Its DNA Target.
Science, 335, 2012
2YPF
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BU of 2ypf by Molmil
Structure of the AvrBs3-DNA complex provides new insights into the initial thymine-recognition mechanism
分子名称: 5'-D(*TP*AP*GP*AP*GP*GP*GP*TP*TP*AP*GP*GP*TP*TP *TP*AP*TP*AP*TP*AP*AP)-3', 5'-D(*TP*TP*TP*AP*TP*AP*TP*AP*AP*AP*CP*CP*TP*AP *AP*CP*CP*CP*TP*CP*TP*AP)-3', AVRBS3
著者Stella, S, Molina, R, Yefimenko, I, Prieto, J, Silva, G.H, Bertonati, C, Juillerat, A, Duchateau, P, Montoya, G.
登録日2012-10-30
公開日2013-08-28
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Structure of the Avrbs3-DNA Complex Provides New Insights Into the Initial Thymine-Recognition Mechanism
Acta Crystallogr.,Sect.D, 69, 2013
6JTQ
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BU of 6jtq by Molmil
RVD HA specifically contacts 5mC through van der Waals interactions
分子名称: DNA (5'-D(*AP*GP*AP*GP*AP*CP*GP*CP*GP*AP*AP*GP*GP*GP*AP*CP*A)-3'), DNA (5'-D(*TP*GP*TP*CP*CP*CP*TP*TP*(5CM)P*GP*CP*GP*TP*CP*TP*CP*T)-3'), TAL effector
著者Liu, L, Yi, C.
登録日2019-04-11
公開日2020-04-15
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.48 Å)
主引用文献RVD HA specifically contacts 5mC through van der Waals interactions
To Be Published
6JVZ
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BU of 6jvz by Molmil
RVD HA specifically contacts 5mC through van der Waals interactions
分子名称: DNA (5'-D(*AP*GP*AP*GP*AP*CP*GP*CP*GP*AP*AP*GP*GP*GP*AP*CP*A)-3'), DNA (5'-D(*TP*GP*TP*CP*CP*CP*TP*TP*(5CM)P*GP*CP*GP*TP*CP*TP*CP*T)-3'), TAL effector
著者Liu, L, Yi, C.
登録日2019-04-18
公開日2020-04-22
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.48 Å)
主引用文献Structural Insights into the Specific Recognition of 5-methylcytosine and 5-hydroxymethylcytosine by TAL Effectors.
J.Mol.Biol., 432, 2020
4GJP
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BU of 4gjp by Molmil
Crystal structure of the TAL effector dHax3 bound to dsDNA containing repetitive methyl-CpG
分子名称: DNA (5'-D(*AP*GP*AP*GP*AP*CP*GP*CP*GP*AP*AP*GP*GP*GP*AP*CP*A)-3'), DNA (5'-D(*TP*GP*TP*CP*CP*CP*TP*TP*(5CM)P*GP*(5CM)P*GP*TP*CP*TP*CP*T)-3'), Hax3, ...
著者Yan, N, Deng, D, Yan, C.Y, Yin, P, Pan, X.J, Shi, Y.G.
登録日2012-08-10
公開日2012-10-03
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Crystal structure of a protein complex
To be Published
4HPZ
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BU of 4hpz by Molmil
Crystal structure of a TALE protein reveals an extended N-terminal DNA binding region
分子名称: SULFATE ION, dTale2
著者Chai, J, Han, Z, Gao, H.
登録日2012-10-25
公開日2012-12-05
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.202 Å)
主引用文献Crystal structure of a TALE protein reveals an extended N-terminal DNA binding region
Cell Res., 22, 2012
4GJR
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BU of 4gjr by Molmil
Crystal structure of the TAL effector dHax3 bound to methylated dsDNA
分子名称: DNA (5'-D(*AP*GP*GP*GP*AP*GP*GP*TP*AP*GP*AP*GP*GP*GP*AP*CP*A)-3'), DNA (5'-D(*TP*GP*TP*CP*CP*CP*TP*(5CM)P*TP*AP*(5CM)P*CP*TP*CP*(5CM)P*CP*T)-3'), Hax3
著者Yan, N, Deng, D, Yan, C.Y, Yin, P, Pan, X.J, Shi, Y.G.
登録日2012-08-10
公開日2012-10-03
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Crystal structure of a protein complex
To be Published
4GG4
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BU of 4gg4 by Molmil
Crystal structure of the TAL effector dHax3 bound to specific DNA-RNA hybrid
分子名称: DNA (5'-D(*TP*GP*TP*CP*CP*CP*TP*TP*TP*AP*TP*CP*TP*CP*TP*CP*T)-3'), Hax3, RNA (5'-R(*AP*GP*AP*GP*AP*GP*AP*UP*AP*AP*AP*GP*GP*GP*AP*CP*A)-3')
著者Yin, P, Deng, D, Yan, C.Y, Pan, X.J, Yan, N, Shi, Y.G.
登録日2012-08-05
公開日2012-10-03
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.501 Å)
主引用文献Specific DNA-RNA hybrid recognition by TAL effectors
Cell Rep, 2, 2012
4OST
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BU of 4ost by Molmil
Crystal structure of the S505C mutant of TAL effector dHax3
分子名称: DNA (5'-D(*AP*GP*AP*GP*AP*GP*AP*TP*AP*AP*AP*GP*GP*GP*AP*CP*A)-3'), DNA (5'-D(*TP*GP*TP*CP*CP*CP*TP*TP*TP*AP*TP*CP*TP*CP*TP*CP*T)-3'), Hax3
著者Deng, D, Wu, J.P, Yan, C.Y, Pan, X.J, Yan, N.
登録日2014-02-13
公開日2014-05-28
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.996 Å)
主引用文献Revisiting the TALE repeat
Protein Cell, 5, 2014
4OSK
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BU of 4osk by Molmil
Crystal structure of TAL effector reveals the recognition between asparagine and guanine
分子名称: DNA (5'-D(*AP*GP*TP*CP*TP*AP*GP*TP*AP*GP*TP*TP*GP*GP*AP*CP*A)-3'), DNA (5'-D(*TP*GP*TP*CP*CP*AP*AP*CP*TP*AP*CP*TP*AP*GP*AP*CP*T)-3'), Hax3
著者Deng, D, Wu, J.P, Yan, C.Y, Pan, X.J, Yan, N.
登録日2014-02-13
公開日2014-05-28
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.398 Å)
主引用文献Revisiting the TALE repeat
Protein Cell, 5, 2014
4OT0
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BU of 4ot0 by Molmil
Crystal structure of the S505T mutant of TAL effector dHax3
分子名称: DNA (5'-D(*AP*GP*AP*GP*AP*GP*AP*TP*AP*AP*AP*GP*GP*GP*AP*CP*A)-3'), DNA (5'-D(*TP*GP*TP*CP*CP*CP*TP*TP*TP*AP*TP*CP*TP*CP*TP*CP*T)-3'), Hax3
著者Deng, D, Wu, J.P, Yan, C.Y, Pan, X.J, Yan, N.
登録日2014-02-13
公開日2014-05-28
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.491 Å)
主引用文献Revisiting the TALE repeat
Protein Cell, 5, 2014
4OSS
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BU of 4oss by Molmil
Crystal structure of the S505Q mutant of TAL effector dHax3
分子名称: DNA (5'-D(*AP*GP*AP*GP*AP*GP*AP*CP*AP*AP*AP*GP*GP*GP*AP*CP*A)-3'), DNA (5'-D(*TP*GP*TP*CP*CP*CP*TP*TP*TP*GP*TP*CP*TP*CP*TP*CP*T)-3'), Hax3
著者Deng, D, Wu, J.P, Yan, C.Y, Pan, X.J, Yan, N.
登録日2014-02-13
公開日2014-05-28
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.397 Å)
主引用文献Revisiting the TALE repeat
Protein Cell, 5, 2014
4OSQ
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BU of 4osq by Molmil
Crystal structure of the S505R mutant of TAL effector dHax3
分子名称: DNA (5'-D(*AP*GP*AP*GP*AP*GP*AP*TP*AP*AP*AP*GP*GP*GP*AP*CP*A)-3'), DNA (5'-D(*TP*GP*TP*CP*CP*CP*TP*TP*TP*GP*TP*CP*TP*CP*TP*CP*T)-3'), Hax3, ...
著者Deng, D, Wu, J.P, Yan, C.Y, Pan, X.J, Yan, N.
登録日2014-02-13
公開日2014-05-28
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.256 Å)
主引用文献Revisiting the TALE repeat
Protein Cell, 5, 2014
6JW4
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BU of 6jw4 by Molmil
Degenerate RVD RG forms a distinct loop conformation
分子名称: DNA (5'-D(*AP*GP*AP*GP*AP*CP*GP*CP*GP*AP*AP*GP*GP*GP*AP*CP*A)-3'), DNA (5'-D(*TP*GP*TP*CP*CP*CP*TP*TP*(5HC)P*GP*CP*GP*TP*CP*TP*CP*T)-3'), TAL effector
著者Liu, L, Yi, C.
登録日2019-04-18
公開日2020-04-22
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.09 Å)
主引用文献Structural Insights into the Specific Recognition of 5-methylcytosine and 5-hydroxymethylcytosine by TAL Effectors.
J.Mol.Biol., 432, 2020
6JW5
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BU of 6jw5 by Molmil
RVD Q* recognizes 5hmC through water-mediated H bonds
分子名称: DNA (5'-D(*AP*GP*AP*GP*AP*CP*GP*CP*GP*AP*AP*GP*GP*GP*AP*CP*A)-3'), DNA (5'-D(*TP*GP*TP*CP*CP*CP*TP*TP*(5HC)P*GP*CP*GP*TP*CP*TP*CP*T)-3'), TAL effector
著者Liu, L, Yi, C.
登録日2019-04-18
公開日2020-04-22
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.99 Å)
主引用文献Structural Insights into the Specific Recognition of 5-methylcytosine and 5-hydroxymethylcytosine by TAL Effectors.
J.Mol.Biol., 432, 2020
6JW0
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BU of 6jw0 by Molmil
Universal RVD R* accommodates cytosine via water-mediated interactions
分子名称: DNA (5'-D(*AP*GP*AP*GP*AP*CP*GP*CP*GP*AP*AP*GP*GP*GP*AP*CP*A)-3'), DNA (5'-D(*TP*GP*TP*CP*CP*CP*TP*TP*CP*GP*CP*GP*TP*CP*TP*CP*T)-3'), TAL effector
著者Liu, L, Yi, C.
登録日2019-04-18
公開日2020-04-22
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural Insights into the Specific Recognition of 5-methylcytosine and 5-hydroxymethylcytosine by TAL Effectors.
J.Mol.Biol., 432, 2020
6JW3
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BU of 6jw3 by Molmil
Degenerate RVD RG forms a distinct loop conformation
分子名称: DNA (5'-D(*AP*GP*AP*GP*AP*CP*GP*CP*GP*AP*AP*GP*GP*GP*AP*CP*A)-3'), DNA (5'-D(*TP*GP*TP*CP*CP*CP*TP*TP*(5CM)P*GP*CP*GP*TP*CP*TP*CP*T)-3'), TAL effector
著者Liu, L, Yi, C.
登録日2019-04-18
公開日2020-04-22
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structural Insights into the Specific Recognition of 5-methylcytosine and 5-hydroxymethylcytosine by TAL Effectors.
J.Mol.Biol., 432, 2020
6JW1
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BU of 6jw1 by Molmil
Universal RVD R* accommodates 5mC via water-mediated interactions
分子名称: DNA (5'-D(*AP*GP*AP*GP*AP*CP*GP*CP*GP*AP*AP*GP*GP*GP*AP*CP*A)-3'), DNA (5'-D(*TP*GP*TP*CP*CP*CP*TP*TP*(5CM)P*GP*CP*GP*TP*CP*TP*CP*T)-3'), TAL effector
著者Liu, L, Yi, C.
登録日2019-04-18
公開日2020-04-22
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献Structural Insights into the Specific Recognition of 5-methylcytosine and 5-hydroxymethylcytosine by TAL Effectors.
J.Mol.Biol., 432, 2020
6JW2
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BU of 6jw2 by Molmil
Universal RVD R* accommodates 5hmC via water-mediated interactions
分子名称: DNA (5'-D(*AP*GP*AP*GP*AP*CP*GP*CP*GP*AP*AP*GP*GP*GP*AP*CP*A)-3'), DNA (5'-D(*TP*GP*TP*CP*CP*CP*TP*TP*(5HC)P*GP*CP*GP*TP*CP*TP*CP*T)-3'), TAL effector
著者Liu, L, Yi, C.
登録日2019-04-18
公開日2020-04-22
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.03 Å)
主引用文献Structural Insights into the Specific Recognition of 5-methylcytosine and 5-hydroxymethylcytosine by TAL Effectors.
J.Mol.Biol., 432, 2020
4OSJ
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BU of 4osj by Molmil
Crystal structure of TAL effector reveals the recognition between asparagine and adenine
分子名称: DNA (5'-D(*AP*GP*AP*GP*AP*GP*AP*TP*AP*AP*AP*GP*GP*GP*AP*CP*A)-3'), DNA (5'-D(*TP*GP*TP*CP*CP*CP*TP*TP*TP*AP*TP*CP*TP*CP*TP*CP*T)-3'), Hax3
著者Deng, D, Wu, J.P, Yan, C.Y, Pan, X.J, Yan, N.
登録日2014-02-13
公開日2014-05-28
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.79 Å)
主引用文献Revisiting the TALE repeat
Protein Cell, 5, 2014
4OTO
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BU of 4oto by Molmil
Crystal structure of the S505W mutant of TAL effector dHax3
分子名称: DNA (5'-D(*AP*GP*AP*GP*AP*GP*AP*TP*AP*AP*AP*GP*GP*GP*AP*CP*A)-3'), DNA (5'-D(*TP*GP*TP*CP*CP*CP*TP*TP*TP*AP*TP*CP*TP*CP*TP*CP*T)-3'), Hax3
著者Deng, D, Wu, J.P, Yan, C.Y, Pan, X.J, Yan, N.
登録日2014-02-14
公開日2014-05-28
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.588 Å)
主引用文献Revisiting the TALE repeat
Protein Cell, 5, 2014
4OSZ
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BU of 4osz by Molmil
Crystal structure of the S505P mutant of TAL effector dHax3
分子名称: DNA (5'-D(*AP*GP*AP*GP*AP*GP*AP*TP*AP*AP*AP*GP*GP*GP*AP*CP*A)-3'), DNA (5'-D(*TP*GP*TP*CP*CP*CP*TP*TP*TP*AP*TP*CP*TP*CP*TP*CP*T)-3'), Hax3
著者Deng, D, Wu, J.P, Yan, C.Y, Pan, X.J, Yan, N.
登録日2014-02-13
公開日2014-05-28
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.614 Å)
主引用文献Revisiting the TALE repeat
Protein Cell, 5, 2014
4OSR
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BU of 4osr by Molmil
Crystal structure of the S505K mutant of TAL effector dHax3
分子名称: DNA (5'-D(*AP*GP*AP*GP*AP*GP*AP*TP*AP*AP*AP*GP*GP*GP*AP*CP*A)-3'), DNA (5'-D(*TP*GP*TP*CP*CP*CP*TP*TP*TP*GP*TP*CP*TP*CP*TP*CP*T)-3'), Hax3
著者Deng, D, Wu, J.P, Yan, C.Y, Pan, X.J, Yan, N.
登録日2014-02-13
公開日2014-05-28
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.944 Å)
主引用文献Revisiting the TALE repeat
Protein Cell, 5, 2014
4OSH
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BU of 4osh by Molmil
Crystal structure of the TAL effector dHax3 with NI RVD at 2.2 angstrom resolution
分子名称: DNA (5'-D(*AP*GP*AP*GP*AP*GP*AP*TP*AP*AP*AP*GP*GP*GP*AP*CP*A)-3'), DNA (5'-D(*TP*GP*TP*CP*CP*CP*TP*TP*TP*AP*TP*CP*TP*CP*TP*CP*T)-3'), Hax3
著者Deng, D, Wu, J.P, Yan, C.Y, Pan, X.J, Yan, N.
登録日2014-02-13
公開日2014-05-28
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.201 Å)
主引用文献Revisiting the TALE repeat
Protein Cell, 5, 2014

 

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