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PDB: 195 件

7TU1
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Structure of the L. blandensis dGTPase R37A mutant
分子名称: 1,2-ETHANEDIOL, SULFATE ION, dGTP triphosphohydrolase
著者Sikkema, A.P, Klemm, B.P, Horng, J.C, Hall, T.M.T.
登録日2022-02-02
公開日2022-06-01
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献High-resolution structures of the SAMHD1 dGTPase homolog from Leeuwenhoekiella blandensis reveal a novel mechanism of allosteric activation by dATP.
J.Biol.Chem., 298, 2022
7TU6
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Structure of the L. blandensis dGTPase bound to dATP
分子名称: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, MAGNESIUM ION, dGTP triphosphohydrolase
著者Klemm, B.P, Sikkema, A.P, Hsu, A.L, Borgnia, M.J, Schaaper, R.M.
登録日2022-02-02
公開日2022-06-01
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献High-resolution structures of the SAMHD1 dGTPase homolog from Leeuwenhoekiella blandensis reveal a novel mechanism of allosteric activation by dATP.
J.Biol.Chem., 298, 2022
7TU7
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Structure of the L. blandensis dGTPase H125A mutant bound to dGTP
分子名称: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, dGTP triphosphohydrolase
著者Klemm, B.P, Sikkema, A.P, Hsu, A.L, Borgnia, M.J, Schaaper, R.M.
登録日2022-02-02
公開日2022-06-01
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献High-resolution structures of the SAMHD1 dGTPase homolog from Leeuwenhoekiella blandensis reveal a novel mechanism of allosteric activation by dATP.
J.Biol.Chem., 298, 2022
7TU2
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BU of 7tu2 by Molmil
Structure of the L. blandensis dGTPase R37A mutant bound to Mn
分子名称: MANGANESE (II) ION, SULFATE ION, dGTP triphosphohydrolase
著者Sikkema, A.P, Klemm, B.P, Horng, J.C, Hall, T.M.T.
登録日2022-02-02
公開日2022-06-01
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.13 Å)
主引用文献High-resolution structures of the SAMHD1 dGTPase homolog from Leeuwenhoekiella blandensis reveal a novel mechanism of allosteric activation by dATP.
J.Biol.Chem., 298, 2022
7TU8
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BU of 7tu8 by Molmil
Structure of the L. blandensis dGTPase H125A mutant bound to dGTP and dATP
分子名称: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
著者Klemm, B.P, Sikkema, A.P, Hsu, A.L, Borgnia, M.J, Schaaper, R.M.
登録日2022-02-02
公開日2022-06-01
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (2.6 Å)
主引用文献High-resolution structures of the SAMHD1 dGTPase homolog from Leeuwenhoekiella blandensis reveal a novel mechanism of allosteric activation by dATP.
J.Biol.Chem., 298, 2022
7TU5
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Structure of the L. blandensis dGTPase in the apo form
分子名称: MAGNESIUM ION, dGTP triphosphohydrolase
著者Klemm, B.P, Sikkema, A.P, Hsu, A.L, Borgnia, M.J, Schaaper, R.M.
登録日2022-02-02
公開日2022-06-01
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (2.1 Å)
主引用文献High-resolution structures of the SAMHD1 dGTPase homolog from Leeuwenhoekiella blandensis reveal a novel mechanism of allosteric activation by dATP.
J.Biol.Chem., 298, 2022
7TU3
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BU of 7tu3 by Molmil
Structure of the L. blandensis dGTPase del55-58 mutant
分子名称: 1,2-ETHANEDIOL, MAGNESIUM ION, SULFATE ION, ...
著者Sikkema, A.P, Klemm, B.P, Horng, J.C, Hall, T.M.T.
登録日2022-02-02
公開日2022-06-01
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.17 Å)
主引用文献High-resolution structures of the SAMHD1 dGTPase homolog from Leeuwenhoekiella blandensis reveal a novel mechanism of allosteric activation by dATP.
J.Biol.Chem., 298, 2022
7TU4
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BU of 7tu4 by Molmil
Structure of the L. blandensis dGTPase del55-58 mutant bound to Mn
分子名称: 1,2-ETHANEDIOL, MANGANESE (II) ION, SULFATE ION, ...
著者Sikkema, A.P, Klemm, B.P, Horng, J.C, Hall, T.M.T.
登録日2022-02-02
公開日2022-06-01
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.26 Å)
主引用文献High-resolution structures of the SAMHD1 dGTPase homolog from Leeuwenhoekiella blandensis reveal a novel mechanism of allosteric activation by dATP.
J.Biol.Chem., 298, 2022
8JJA
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SP1746 in complex with acetate ions
分子名称: ACETATE ION, FE (III) ION, bis(5'-nucleosyl)-tetraphosphatase (symmetrical)
著者Jin, Y, Niu, L, Ke, J.
登録日2023-05-30
公開日2024-05-08
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural and biochemical characterization of a nucleotide hydrolase from Streptococcus pneumonia.
Structure, 2024
8JKR
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SP1746 in complex with UMP
分子名称: 1,2-ETHANEDIOL, FE (III) ION, GLYCEROL, ...
著者Jin, Y, Niu, L, Ke, J.
登録日2023-06-01
公開日2024-05-08
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural and biochemical characterization of a nucleotide hydrolase from Streptococcus pneumonia.
Structure, 2024
8JK8
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SP1746 in complex with UDP
分子名称: 1,2-ETHANEDIOL, FE (III) ION, GLYCEROL, ...
著者Jin, Y, Niu, L, Ke, J.
登録日2023-06-01
公開日2024-05-08
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structural and biochemical characterization of a nucleotide hydrolase from Streptococcus pneumonia.
Structure, 2024
8JKP
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BU of 8jkp by Molmil
SP1746 in complex with dTMP
分子名称: FE (III) ION, GLYCEROL, SULFATE ION, ...
著者Jin, Y, Ke, J, Niu, L.
登録日2023-06-01
公開日2024-05-08
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural and biochemical characterization of a nucleotide hydrolase from Streptococcus pneumonia.
Structure, 2024
8JKA
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BU of 8jka by Molmil
SP1746 in complex with AMP
分子名称: ADENOSINE MONOPHOSPHATE, FE (III) ION, SULFATE ION, ...
著者Jin, Y, Niu, L, Ke, J.
登録日2023-06-01
公開日2024-05-08
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Structural and biochemical characterization of a nucleotide hydrolase from Streptococcus pneumonia.
Structure, 2024
8JK5
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BU of 8jk5 by Molmil
Crystal structure of SP1746 from Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)
分子名称: FE (III) ION, GLYCEROL, SULFATE ION, ...
著者Jin, Y, Niu, L, Ke, J.
登録日2023-05-31
公開日2024-05-08
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural and biochemical characterization of a nucleotide hydrolase from Streptococcus pneumonia.
Structure, 2024
8JJK
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BU of 8jjk by Molmil
SP1746 in complex with ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, FE (III) ION, GLYCEROL, ...
著者Jin, Y, Niu, L, Ke, J.
登録日2023-05-30
公開日2024-05-08
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural and biochemical characterization of a nucleotide hydrolase from Streptococcus pneumonia.
Structure, 2024
8JK9
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BU of 8jk9 by Molmil
SP1746 in complex with GDP
分子名称: FE (III) ION, GLYCEROL, GUANOSINE-5'-DIPHOSPHATE, ...
著者Jin, Y, Ke, J, Niu, L.
登録日2023-06-01
公開日2024-05-08
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural and biochemical characterization of a nucleotide hydrolase from Streptococcus pneumonia.
Structure, 2024
6OIX
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BU of 6oix by Molmil
Structure of Escherichia coli dGTPase bound to GTP
分子名称: Deoxyguanosinetriphosphate triphosphohydrolase, GUANOSINE-5'-TRIPHOSPHATE, MANGANESE (II) ION
著者Barnes, C.O, Wu, Y, Calero, G.
登録日2019-04-09
公開日2019-05-08
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (3.15 Å)
主引用文献The crystal structure of dGTPase reveals the molecular basis of dGTP selectivity.
Proc.Natl.Acad.Sci.USA, 116, 2019
6OIV
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BU of 6oiv by Molmil
XFEL structure of Escherichia coli dGTPase
分子名称: Deoxyguanosinetriphosphate triphosphohydrolase, MANGANESE (II) ION, SULFATE ION
著者Barnes, C.O, Wu, Y, Calero, G.
登録日2019-04-09
公開日2019-06-05
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (3.06 Å)
主引用文献The crystal structure of dGTPase reveals the molecular basis of dGTP selectivity.
Proc.Natl.Acad.Sci.USA, 116, 2019
6OIY
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BU of 6oiy by Molmil
Structure of Escherichia coli bound to dGTP
分子名称: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, Deoxyguanosinetriphosphate triphosphohydrolase, MANGANESE (II) ION
著者Barnes, C.O, Wu, Y, Calero, G.
登録日2019-04-09
公開日2019-05-15
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (3.29 Å)
主引用文献The crystal structure of dGTPase reveals the molecular basis of dGTP selectivity.
Proc.Natl.Acad.Sci.USA, 116, 2019
6OI7
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BU of 6oi7 by Molmil
Se-Met structure of apo- Escherichia coli dGTPase
分子名称: Deoxyguanosinetriphosphate triphosphohydrolase, MANGANESE (II) ION, SULFATE ION
著者Calero, G, Barnes, C.O, Wu, Y.
登録日2019-04-08
公開日2019-05-29
最終更新日2020-01-01
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献The crystal structure of dGTPase reveals the molecular basis of dGTP selectivity.
Proc.Natl.Acad.Sci.USA, 116, 2019
6OIW
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BU of 6oiw by Molmil
Structure of Escherichia coli dGTPase bound to dGTP-1-thiol
分子名称: 2'-deoxyguanosine-5'-O-(1-thiotriphosphate), Deoxyguanosinetriphosphate triphosphohydrolase, MAGNESIUM ION, ...
著者Barnes, C.O, Wu, Y, Calero, G.
登録日2019-04-09
公開日2019-05-15
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (3.35 Å)
主引用文献The crystal structure of dGTPase reveals the molecular basis of dGTP selectivity.
Proc.Natl.Acad.Sci.USA, 116, 2019
6PWY
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BU of 6pwy by Molmil
Structure of C. elegans ZK177.8, SAMHD1 ortholog
分子名称: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
著者Lim, C.S, Maehigashi, T, Wade, L.R, Bowen, N, Knecht, K, Xiong, Y, Kim, B.
登録日2019-07-24
公開日2020-07-29
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献ZK177.8 of Caenorhabditis elegans: Aicardi-Goutieres Syndrome SAMHD1 Ortholog
To Be Published
4QFY
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BU of 4qfy by Molmil
Crystal structure of the tetrameric dGTP/dCTP-bound SAMHD1 (RN206) mutant catalytic core
分子名称: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, Deoxynucleoside triphosphate triphosphohydrolase SAMHD1, ...
著者Koharudin, L.M.I, Wu, Y, DeLucia, M, Mehrens, J, Gronenborn, A.M, Ahn, J.
登録日2014-05-22
公開日2014-10-15
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural Basis of Allosteric Activation of Sterile alpha Motif and Histidine-Aspartate Domain-containing Protein 1 (SAMHD1) by Nucleoside Triphosphates.
J.Biol.Chem., 289, 2014
4QG0
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BU of 4qg0 by Molmil
Crystal structure of the tetrameric dGTP/dUTP-bound SAMHD1 (RN206) mutant catalytic core
分子名称: 1,2-ETHANEDIOL, 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, DEOXYURIDINE-5'-TRIPHOSPHATE, ...
著者Koharudin, L.M.I, Wu, Y, DeLucia, M, Mehrens, J, Gronenborn, A.M, Ahn, J.
登録日2014-05-22
公開日2014-10-15
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural Basis of Allosteric Activation of Sterile alpha Motif and Histidine-Aspartate Domain-containing Protein 1 (SAMHD1) by Nucleoside Triphosphates.
J.Biol.Chem., 289, 2014
4QG4
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BU of 4qg4 by Molmil
Crystal structure of the tetrameric GTP/dATP/ATP-bound SAMHD1 (H210A) mutant catalytic core
分子名称: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, Deoxynucleoside triphosphate triphosphohydrolase SAMHD1, GUANOSINE-5'-TRIPHOSPHATE, ...
著者Koharudin, L.M.I, Wu, Y, DeLucia, M, Mehrens, J, Gronenborn, A.M, Ahn, J.
登録日2014-05-22
公開日2014-10-15
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural Basis of Allosteric Activation of Sterile alpha Motif and Histidine-Aspartate Domain-containing Protein 1 (SAMHD1) by Nucleoside Triphosphates.
J.Biol.Chem., 289, 2014

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件を2024-07-10に公開中

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