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PDB: 1477 件

8C3A
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Crystal structure of ailanthone bound to the Candida albicans 80S ribosome
分子名称: 18S, 25S, 3-O-acetyl-2-O-(3-O-acetyl-6-deoxy-beta-D-glucopyranosyl)-6-deoxy-1-O-{[(2R,2'S,3a'R,4''S,5''R,6'S,7a'S)-5''-methyl-4''-{[(2E)-3-phenylprop-2-enoyl]oxy}decahydrodispiro[oxirane-2,3'-[1]benzofuran-2',2''-pyran]-6'-yl]carbonyl}-beta-D-glucopyranose, ...
著者Kolosova, O, Zgadzay, Y, Yusupov, M.
登録日2022-12-23
公開日2024-01-10
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献New crystal system to promote screening for new eukaryotic inhibitors
To Be Published
8CVL
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Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMTHSMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.30A resolution
分子名称: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ...
著者Syroegin, E.A, Aleksandrova, E.V, Polikanov, Y.S.
登録日2022-05-18
公開日2022-10-19
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Insights into the ribosome function from the structures of non-arrested ribosome-nascent chain complexes.
Nat.Chem., 15, 2023
8D8L
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Yeast mitochondrial small subunit assembly intermediate (State 3)
分子名称: 15S ribosomal RNA, 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial, ...
著者Burnside, C, Harper, N, Klinge, S.
登録日2022-06-08
公開日2022-12-14
最終更新日2023-02-15
実験手法ELECTRON MICROSCOPY (2.6 Å)
主引用文献Principles of mitoribosomal small subunit assembly in eukaryotes.
Nature, 614, 2023
8D8K
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Yeast mitochondrial small subunit assembly intermediate (State 2)
分子名称: 15S ribosomal RNA, 37S ribosomal protein MRP1, mitochondrial, ...
著者Burnside, C, Harper, N.J, Klinge, S.
登録日2022-06-08
公開日2022-12-21
最終更新日2023-02-15
実験手法ELECTRON MICROSCOPY (3.13 Å)
主引用文献Principles of mitoribosomal small subunit assembly in eukaryotes.
Nature, 614, 2023
8D8J
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Yeast mitochondrial small subunit assembly intermediate (State 1)
分子名称: 15S ribosomal RNA, 37S ribosomal protein MRP13, mitochondrial, ...
著者Burnside, C, Harper, N, Klinge, S.
登録日2022-06-08
公開日2022-12-21
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Principles of mitoribosomal small subunit assembly in eukaryotes.
Nature, 614, 2023
8BHF
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Cryo-EM structure of stalled rabbit 80S ribosomes in complex with human CCR4-NOT and CNOT4
分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S11, ...
著者Absmeier, E, Chandrasekaran, V, O'Reilly, F.J, Stowell, J.A.W, Rappsilber, J, Passmore, L.A.
登録日2022-10-31
公開日2023-09-06
最終更新日2023-11-01
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Modulation of GluA2-gamma 5 synaptic complex desensitization, polyamine block and antiepileptic perampanel inhibition by auxiliary subunit cornichon-2.
Nat.Struct.Mol.Biol., 30, 2023
8BH4
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Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and AAm6A mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site
分子名称: 16S rRNA RRSB-RRNA, 23S rRNA RRLG-RRNA, 30S ribosomal protein S10, ...
著者Koziej, L, Glatt, S.
登録日2022-10-29
公開日2023-08-16
実験手法ELECTRON MICROSCOPY (2.62 Å)
主引用文献Modulation of translational decoding by m 6 A modification of mRNA.
Nat Commun, 14, 2023
8BHL
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Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and Am6AA mRNA codon in the A-site after uncompleted di-peptide formation
分子名称: 16S rRNA RRSB-RRNA, 23S rRNA RRLG-RRNA, 30S ribosomal protein S10, ...
著者Koziej, L, Glatt, S.
登録日2022-10-31
公開日2023-08-16
実験手法ELECTRON MICROSCOPY (2.21 Å)
主引用文献Modulation of translational decoding by m 6 A modification of mRNA.
Nat Commun, 14, 2023
8BGE
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BU of 8bge by Molmil
Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and AAm6A mRNA codon in the A-site after uncompleted di-peptide formation
分子名称: 16S rRNA RRSB-RRNA, 23S rRNA RRLG-RRNA, 30S ribosomal protein S10, ...
著者Koziej, L, Glatt, S.
登録日2022-10-27
公開日2023-08-16
実験手法ELECTRON MICROSCOPY (2.11 Å)
主引用文献Modulation of translational decoding by m 6 A modification of mRNA.
Nat Commun, 14, 2023
8BHP
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BU of 8bhp by Molmil
Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and m6AAA mRNA codon in the A-site after uncompleted di-peptide formation
分子名称: 16S rRNA RRSB-RRNA, 23S rRNA RRLG-RRNA, 30S ribosomal protein S10, ...
著者Koziej, L, Glatt, S.
登録日2022-10-31
公開日2023-08-16
実験手法ELECTRON MICROSCOPY (2.37 Å)
主引用文献Modulation of translational decoding by m 6 A modification of mRNA.
Nat Commun, 14, 2023
8BHJ
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Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and Am6AA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site
分子名称: 16S rRNA RRSB-RRNA, 23S rRNA RRLG-RRNA, 30S ribosomal protein S10, ...
著者Koziej, L, Glatt, S.
登録日2022-10-31
公開日2023-08-16
実験手法ELECTRON MICROSCOPY (2.81 Å)
主引用文献Modulation of translational decoding by m 6 A modification of mRNA.
Nat Commun, 14, 2023
8BHN
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Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and m6AAA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site
分子名称: 16S rRNA RRSB-RRNA, 23S rRNA RRLG-RRNA, 30S ribosomal protein S10, ...
著者Koziej, L, Glatt, S.
登録日2022-10-31
公開日2023-08-16
実験手法ELECTRON MICROSCOPY (2.85 Å)
主引用文献Modulation of translational decoding by m 6 A modification of mRNA.
Nat Commun, 14, 2023
8BIM
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Initiation complex of the E. coli 70S ribosome with mRNA containing AAm6A codon in the A-site
分子名称: 16S rRNA RRSB-RRNA, 23S rRNA RRLG-RRNA, 30S ribosomal protein S10, ...
著者Koziej, L, Glatt, S.
登録日2022-11-02
公開日2023-08-16
実験手法ELECTRON MICROSCOPY (2.04 Å)
主引用文献Modulation of translational decoding by m 6 A modification of mRNA.
Nat Commun, 14, 2023
8BGH
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BU of 8bgh by Molmil
Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and AAA mRNA codon in the A-site after uncompleted di-peptide formation
分子名称: 16S rRNA RRSB-RRNA, 23S rRNA RRLG-RRNA, 30S ribosomal protein S10, ...
著者Koziej, L, Glatt, S.
登録日2022-10-27
公開日2023-08-16
実験手法ELECTRON MICROSCOPY (2.88 Å)
主引用文献Modulation of translational decoding by m 6 A modification of mRNA.
Nat Commun, 14, 2023
8BF7
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BU of 8bf7 by Molmil
Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and AAA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-site
分子名称: 16S rRNA RRSB-RRNA, 23S rRNA RRLG-RRNA, 30S ribosomal protein S10, ...
著者Koziej, L, Glatt, S.
登録日2022-10-24
公開日2023-08-16
実験手法ELECTRON MICROSCOPY (2.33 Å)
主引用文献Modulation of translational decoding by m 6 A modification of mRNA.
Nat Commun, 14, 2023
8BH6
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Mature 30S ribosomal subunit from Staphylococcus aureus
分子名称: 16S ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
著者Garaeva, N, Fatkhullin, B, Jenner, L, Soufari, H, Yusupov, M, Usachev, K.
登録日2022-10-30
公開日2023-09-20
最終更新日2023-11-08
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Ribosome maturation factor P (RimP) from Staphylococcus aureus
Structure, 2023
8BIL
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BU of 8bil by Molmil
Initiation complex of the E. coli 70S ribosome with mRNA containing AAA codon in the A-site.
分子名称: 16S rRNA RRSB-RRNA, 23S rRNA RRLG-RRNA, 30S ribosomal protein S10, ...
著者Koziej, L, Glatt, S.
登録日2022-11-02
公開日2023-08-16
実験手法ELECTRON MICROSCOPY (2.04 Å)
主引用文献Modulation of translational decoding by m 6 A modification of mRNA.
Nat Commun, 14, 2023
8BH7
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BU of 8bh7 by Molmil
The complex of immature 30S ribosomal subunit with Ribosome maturation factor P (RimP) from Staphylococcus aureus
分子名称: 16S ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
著者Garaeva, N, Fatkhullin, B, Jenner, L, Soufari, H, Yusupov, M, Usachev, K.
登録日2022-10-30
公開日2023-09-20
最終更新日2023-11-08
実験手法ELECTRON MICROSCOPY (4.23 Å)
主引用文献Ribosome maturation factor P (RimP) from Staphylococcus aureus
Structure, 2023
8CDL
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80S S. cerevisiae ribosome with ligands in hybrid-2 pre-translocation (PRE-H2) complex
分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ...
著者Milicevic, N, Jenner, L, Myasnikov, A, Yusupov, M, Yusupova, G.
登録日2023-01-31
公開日2023-09-20
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (2.72 Å)
主引用文献mRNA reading frame maintenance during eukaryotic ribosome translocation.
Nature, 625, 2024
8CDR
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Translocation intermediate 2 (TI-2) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarin
分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ...
著者Milicevic, N, Jenner, L, Myasnikov, A, Yusupov, M, Yusupova, G.
登録日2023-01-31
公開日2023-09-20
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (2.04 Å)
主引用文献mRNA reading frame maintenance during eukaryotic ribosome translocation.
Nature, 625, 2024
8CF5
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BU of 8cf5 by Molmil
Translocation intermediate 1 (TI-1) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarin
分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ...
著者Milicevic, N, Jenner, L, Myasnikov, A, Yusupov, M, Yusupova, G.
登録日2023-02-02
公開日2023-09-20
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (2.71 Å)
主引用文献mRNA reading frame maintenance during eukaryotic ribosome translocation.
Nature, 625, 2024
8CGN
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BU of 8cgn by Molmil
Non-rotated 80S S. cerevisiae ribosome with ligands
分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ...
著者Milicevic, N, Jenner, L, Myasnikov, A, Yusupov, M, Yusupova, G.
登録日2023-02-06
公開日2023-09-20
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (2.28 Å)
主引用文献mRNA reading frame maintenance during eukaryotic ribosome translocation.
Nature, 625, 2024
8CCS
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80S S. cerevisiae ribosome with ligands in hybrid-1 pre-translocation (PRE-H1) complex
分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ...
著者Milicevic, N, Jenner, L, Myasnikov, A, Yusupov, M, Yusupova, G.
登録日2023-01-27
公開日2023-09-20
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (1.97 Å)
主引用文献mRNA reading frame maintenance during eukaryotic ribosome translocation.
Nature, 625, 2024
8CKU
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Translocation intermediate 1 (TI-1*) of 80S S. cerevisiae ribosome with ligands and eEF2 in the absence of sordarin
分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ...
著者Milicevic, N, Jenner, L, Myasnikov, A, Yusupov, M, Yusupova, G.
登録日2023-02-16
公開日2023-09-20
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (3.11 Å)
主引用文献mRNA reading frame maintenance during eukaryotic ribosome translocation.
Nature, 625, 2024
8BR8
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Giardia ribosome in POST-T state (A1)
分子名称: 40S ribosomal protein S21, 40S ribosomal protein S25, 40S ribosomal protein S26, ...
著者Majumdar, S, Emmerich, A.G, Sanyal, S.
登録日2022-11-22
公開日2023-03-15
最終更新日2023-05-03
実験手法ELECTRON MICROSCOPY (3.35 Å)
主引用文献Insights into translocation mechanism and ribosome evolution from cryo-EM structures of translocation intermediates of Giardia intestinalis.
Nucleic Acids Res., 51, 2023

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件を2024-07-10に公開中

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