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PDB: 81 件

7RY6
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Solution NMR structural bundle of the first cyclization domain from yersiniabactin synthetase (Cy1) impacted by dynamics
分子名称: HMWP2 nonribosomal peptide synthetase
著者Kancherla, A.K, Mishra, S.H, Marincin, K.A, Nerli, S, Sgourakis, N.G, Dowling, D.P, Bouvignies, G, Frueh, D.P.
登録日2021-08-24
公開日2022-07-13
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Global protein dynamics as communication sensors in peptide synthetase domains.
Sci Adv, 8, 2022
7R9X
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Crystal structure of a dehydrating condensation domain, AmbE-CmodAA, involved in nonribosomal peptide synthesis
分子名称: AmbE, IODIDE ION, SODIUM ION
著者Fortinez, C.M, Schmeing, T.M.
登録日2021-06-29
公開日2022-07-13
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.14 Å)
主引用文献Structure and Function of a Dehydrating Condensation Domain in Nonribosomal Peptide Biosynthesis.
J.Am.Chem.Soc., 144, 2022
1L5A
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Crystal Structure of VibH, an NRPS Condensation Enzyme
分子名称: amide synthase
著者Keating, T.A, Marshall, C.G, Walsh, C.T, Keating, A.E.
登録日2002-03-06
公開日2002-06-26
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献The structure of VibH represents nonribosomal peptide synthetase condensation, cyclization and epimerization domains.
Nat.Struct.Biol., 9, 2002
6TA8
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Crystal structure of the epimerization domain from the third module of tyrocidine synthetase B, TycB3(E)
分子名称: Tyrocidine synthase 2
著者Fage, C.D, Marahiel, M.A.
登録日2019-10-29
公開日2020-11-18
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Communication Breakdown: Dissecting the COM Interfaces between the Subunits of Nonribosomal Peptide Synthetases
Acs Catalysis, 2021
6AEF
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PapA2 acyl transferase
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETATE ION, Trehalose-2-sulfate acyltransferase PapA2, ...
著者Chaudhary, S, Rao, V, Panchal, V.
登録日2018-08-04
公開日2019-06-05
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.16 Å)
主引用文献A novel mutation alters the stability of PapA2 resulting in the complete abrogation of sulfolipids in clinical mycobacterial strains.
Faseb Bioadv, 1, 2019
6AD3
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Structural characterization of the condensation domain from Monacolin K polyketide synthase MokA
分子名称: Lovastatin nonaketide synthase mokA
著者Wang, L, Zheng, J.
登録日2018-07-30
公開日2019-04-03
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Crystal structure of the condensation domain from lovastatin polyketide synthase.
Synth Syst Biotechnol, 4, 2019
4TX2
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Crystal structure of the X-domain from teicoplanin biosynthesis
分子名称: Non-ribosomal peptide synthetase
著者Peschke, M, Haslinger, K, Cryle, M.J.
登録日2014-07-02
公開日2015-02-04
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献X-domain of peptide synthetases recruits oxygenases crucial for glycopeptide biosynthesis.
Nature, 521, 2015
2XHG
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Crystal Structure of the Epimerization Domain from the Initiation Module of Tyrocidine Biosynthesis
分子名称: GLYCEROL, SODIUM ION, TYROCIDINE SYNTHETASE A
著者Samel, S.-A, Heine, A, Marahiel, M.A, Essen, L.-O.
登録日2010-06-15
公開日2011-07-06
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structure of the Epimerization Domain of Tyrocidine Synthetase A
Acta Crystallogr.,Sect.D, 70, 2014
4HVM
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Crystal structure of tallysomycin biosynthesis protein TlmII
分子名称: SULFATE ION, TlmII
著者Chang, C, Bigelow, L, Bearden, J, Babnigg, G, Bingman, C.A, Yennamalli, R, Lohman, J, Ma, M, Shen, B, Phillips Jr, G.N, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Enzyme Discovery for Natural Product Biosynthesis (NatPro)
登録日2012-11-06
公開日2012-11-21
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.704 Å)
主引用文献Crystal structure of tallysomycin biosynthesis protein TlmII
To be Published
4JN5
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Crystal structures of the first condensation domain of the CDA synthetase
分子名称: CDA peptide synthetase I
著者Bloudoff, K, Schmeing, T.M.
登録日2013-03-14
公開日2013-06-19
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.44 Å)
主引用文献Crystal Structures of the First Condensation Domain of CDA Synthetase Suggest Conformational Changes during the Synthetic Cycle of Nonribosomal Peptide Synthetases.
J.Mol.Biol., 425, 2013
4JN3
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Crystal structures of the first condensation domain of the CDA synthetase
分子名称: CDA peptide synthetase I
著者Bloudoff, K, Schmeing, T.M.
登録日2013-03-14
公開日2013-06-19
最終更新日2017-11-15
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献Crystal Structures of the First Condensation Domain of CDA Synthetase Suggest Conformational Changes during the Synthetic Cycle of Nonribosomal Peptide Synthetases.
J.Mol.Biol., 425, 2013
4ZNM
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Crystal structure of SgcC5 protein from Streptomyces globisporus (apo form)
分子名称: C-domain type II peptide synthetase, CHLORIDE ION, SODIUM ION
著者Michalska, K, Bigelow, L, Jedrzejczak, R, Babnigg, G, Lohman, J, Ma, M, Rudolf, J, Chang, C.-Y, Shen, B, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Enzyme Discovery for Natural Product Biosynthesis (NatPro)
登録日2015-05-04
公開日2015-05-27
最終更新日2019-12-25
実験手法X-RAY DIFFRACTION (1.998 Å)
主引用文献Crystal structure of SgcC5 protein from Streptomyces globisporus (apo form)
To Be Published
4ZXW
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Crystal structure of SgcC5 protein from Streptomyces globisporus (complex with (R)-(-)-1-(2-naphthyl)-1,2-ethanediol and sucrose)
分子名称: (1R)-1-(naphthalen-2-yl)ethane-1,2-diol, 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID, C-domain type II peptide synthetase, ...
著者Michalska, K, Bigelow, L, Jedrzejczak, R, Babnigg, G, Lohman, J, Ma, M, Rudolf, J, Chang, C.-Y, Shen, B, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Enzyme Discovery for Natural Product Biosynthesis (NatPro)
登録日2015-05-20
公開日2015-06-17
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.187 Å)
主引用文献Crystal structure of SgcC5 protein from Streptomyces globisporus
To Be Published
7JUA
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Crystal structure of the second heterocyclization domain of yersiniabactin synthetase at 2.35 A resolution
分子名称: 2-(2-METHOXYETHOXY)ETHANOL, Irp2 protein, SODIUM ION
著者Xia, Y, Soule, J, Dowling, D.P.
登録日2020-08-19
公開日2021-09-22
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献High-resolution structures of a siderophore-producing cyclization domain from Yersinia pestis offer a refined proposal of substrate binding.
J.Biol.Chem., 2022
7JTJ
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Crystal structure of the second heterocyclization domain of yersiniabactin synthetase
分子名称: 2-(2-METHOXYETHOXY)ETHANOL, Irp2 protein, SODIUM ION
著者Xia, Y, Gnann, A.D, Dowling, D.P.
登録日2020-08-17
公開日2021-10-06
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献High-resolution structures of a siderophore-producing cyclization domain from Yersinia pestis offer a refined proposal of substrate binding.
J.Biol.Chem., 298, 2022
5DIJ
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BU of 5dij by Molmil
The crystal structure of CT
分子名称: CHLORIDE ION, GLYCEROL, TqaA
著者Zhang, J.R, Tang, Y, Zhou, J.H.
登録日2015-09-01
公開日2016-09-07
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural basis of nonribosomal peptide macrocyclization in fungi
Nat.Chem.Biol., 12, 2016
5DLK
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The crystal structure of CT mutant
分子名称: 1,2-ETHANEDIOL, DIMETHYL SULFOXIDE, TqaA
著者Zhang, J.R, Tang, Y, Zhou, J.H.
登録日2015-09-06
公開日2016-09-07
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural basis of nonribosomal peptide macrocyclization in fungi
Nat.Chem.Biol., 12, 2016
5DUA
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First condensation domain of the calcium-dependent antibiotic synthetase in complex with substrate analogue 3a
分子名称: CDA peptide synthetase I, CHLORIDE ION, N-pentyl-L-alaninamide
著者Bloudoff, K, Alonzo, D.A, Schmeing, T.M.
登録日2015-09-18
公開日2016-03-30
最終更新日2020-01-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Chemical Probes Allow Structural Insight into the Condensation Reaction of Nonribosomal Peptide Synthetases.
Cell Chem Biol, 23, 2016
5EGF
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BU of 5egf by Molmil
The crystal structure of SeMet-CT
分子名称: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, 1,2-ETHANEDIOL, TqaA
著者Zhang, J.R, Tang, Y, Zhou, J.H.
登録日2015-10-27
公開日2016-10-19
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.29 Å)
主引用文献Structural basis of nonribosomal peptide macrocyclization in fungi
Nat.Chem.Biol., 12, 2016
5DU9
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First condensation domain of the calcium-dependent antibiotic synthetase in complex with substrate analogue 2a
分子名称: (2S)-2-amino-N-butyl-propanamide, CDA peptide synthetase I, CHLORIDE ION, ...
著者Bloudoff, K, Alonzo, D.A, Schmeing, T.M.
登録日2015-09-18
公開日2016-03-30
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Chemical Probes Allow Structural Insight into the Condensation Reaction of Nonribosomal Peptide Synthetases.
Cell Chem Biol, 23, 2016
7C1L
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Crystal structure of the starter condensation domain of rhizomide synthetase RzmA mutant R148A in complex with C8-CoA
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Non-ribosomal peptide synthetase modules, OCTANOYL-COENZYME A
著者Zhong, L, Diao, X, Zhang, N, Li, F.W, Zhou, H.B, Chen, H.N, Ren, X, Zhang, Y, Wu, D, Bian, X.
登録日2020-05-05
公開日2020-11-25
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Engineering and elucidation of the lipoinitiation process in nonribosomal peptide biosynthesis.
Nat Commun, 12, 2021
7C1U
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Crystal structure of the starter condensation domain of rhizomide synthetase RzmA mutant H140V/R148A in a "product-released" conformation
分子名称: Non-ribosomal peptide synthetase modules
著者Zhong, L, Diao, X, Zhang, N, Li, F.W, Zhou, H.B, Chen, H.N, Ren, X, Zhang, Y, Wu, D, Bian, X.
登録日2020-05-05
公開日2020-11-25
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Engineering and elucidation of the lipoinitiation process in nonribosomal peptide biosynthesis.
Nat Commun, 12, 2021
7C1R
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Crystal structure of the starter condensation domain of rhizomide synthetase RzmA mutant H140A/R148A in complex with C8-CoA
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Non-ribosomal peptide synthetase modules, OCTANOYL-COENZYME A
著者Zhong, L, Diao, X, Zhang, N, Li, F.W, Zhou, H.B, Chen, H.N, Ren, X, Zhang, Y, Wu, D, Bian, X.
登録日2020-05-05
公開日2020-11-25
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.698 Å)
主引用文献Engineering and elucidation of the lipoinitiation process in nonribosomal peptide biosynthesis.
Nat Commun, 12, 2021
7C1H
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Crystal structure of the starter condensation domain of rhizomide synthetase RzmA
分子名称: Non-ribosomal peptide synthetase modules
著者Zhong, L, Diao, X, Zhang, N, Li, F.W, Zhou, H.B, Chen, H.N, Ren, X, Zhang, Y, Wu, D, Bian, X.
登録日2020-05-04
公開日2020-11-25
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Engineering and elucidation of the lipoinitiation process in nonribosomal peptide biosynthesis.
Nat Commun, 12, 2021
7C1P
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Crystal structure of the starter condensation domain of the rhizomide synthetase RzmA mutant H140V, R148A
分子名称: Non-ribosomal peptide synthetase modules
著者Zhong, L, Diao, X, Zhang, N, Li, F.W, Zhou, H.B, Chen, H.N, Ren, X, Zhang, Y, Wu, D.
登録日2020-05-05
公開日2020-11-25
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Engineering and elucidation of the lipoinitiation process in nonribosomal peptide biosynthesis.
Nat Commun, 12, 2021

 

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