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PDB: 659 件
4K75
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CFTR Associated Ligand (CAL) PDZ domain bound to peptide iCAL36-QDTRL (ANSRWQDTRL)
分子名称: Golgi-associated PDZ and coiled-coil motif-containing protein, iCAL36-QDTRL peptide
著者Amacher, J.F, Madden, D.R.
登録日2013-04-16
公開日2014-01-22
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Stereochemical Preferences Modulate Affinity and Selectivity among Five PDZ Domains that Bind CFTR: Comparative Structural and Sequence Analyses.
Structure, 22, 2014
4JOP
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BU of 4jop by Molmil
CFTR Associated Ligand (CAL) PDZ bound to HPV16 E6 oncoprotein C-terminal peptide (TRRETQL)
分子名称: Golgi-associated PDZ and coiled-coil motif-containing protein, Protein E6
著者Amacher, J.F, Madden, D.R.
登録日2013-03-18
公開日2014-01-22
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Stereochemical Preferences Modulate Affinity and Selectivity among Five PDZ Domains that Bind CFTR: Comparative Structural and Sequence Analyses.
Structure, 22, 2014
3CYY
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BU of 3cyy by Molmil
The crystal structure of ZO-1 PDZ2 in complex with the Cx43 peptide
分子名称: Tight junction protein ZO-1, peptide from Gap junction alpha-1 protein
著者Pan, L, Zhang, M.
登録日2008-04-27
公開日2008-09-23
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Domain-swapped dimerization of ZO-1 PDZ2 generates specific and regulatory connexin43-binding sites
Embo J., 27, 2008
4JL7
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BU of 4jl7 by Molmil
Crystal Structure of the Chemokine Receptor CXCR2 in Complex with the First PDZ Domain of NHERF1
分子名称: CHLORIDE ION, Na(+)/H(+) exchange regulatory cofactor NHE-RF1
著者Lu, G, Wu, Y, Jiang, Y, Brunzelle, J, Sirinupong, N, Li, C, Yang, Z.
登録日2013-03-12
公開日2013-10-23
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.16 Å)
主引用文献Structural Insights into Neutrophilic Migration Revealed by the Crystal Structure of the Chemokine Receptor CXCR2 in Complex with the First PDZ Domain of NHERF1.
Plos One, 8, 2013
3DIW
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BU of 3diw by Molmil
c-terminal beta-catenin bound TIP-1 structure
分子名称: Tax1-binding protein 3, decameric peptide form Catenin beta-1
著者Shen, Y.
登録日2008-06-21
公開日2008-10-21
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural Basis of beta-Catenin Recognition by Tax-interacting Protein-1
J.Mol.Biol., 384, 2008
4JOK
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BU of 4jok by Molmil
CFTR Associated Ligand (CAL) PDZ domain bound to peptide Y-iCAL36 (ANSRYPTSII)
分子名称: GLYCEROL, Golgi-associated PDZ and coiled-coil motif-containing protein, Y-iCAL36 peptide
著者Amacher, J.F, Madden, D.R.
登録日2013-03-18
公開日2014-01-22
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.09 Å)
主引用文献Stereochemical Preferences Modulate Affinity and Selectivity among Five PDZ Domains that Bind CFTR: Comparative Structural and Sequence Analyses.
Structure, 22, 2014
3DJ3
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BU of 3dj3 by Molmil
Crystal Structure of C-terminal Truncated TIP-1 (6-113)
分子名称: Tax1-binding protein 3
著者Shen, Y.
登録日2008-06-21
公開日2008-10-21
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural Basis of beta-Catenin Recognition by Tax-interacting Protein-1
J.Mol.Biol., 384, 2008
3BPU
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BU of 3bpu by Molmil
Crystal structure of the 3rd PDZ domain of human membrane associated guanylate kinase, C677S and C709S double mutant
分子名称: Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1, ZINC ION
著者Pilka, E.S, Hozjan, V, Cooper, C, Pike, A.C.W, Elkins, J, Doyle, D.A, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Weigelt, J, Oppermann, U, Structural Genomics Consortium (SGC)
登録日2007-12-19
公開日2008-01-08
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal structure of the 3rd PDZ domain of human membrane associated guanylate kinase, C677S and C709S double mutant.
To be Published
6X1N
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BU of 6x1n by Molmil
Crystal Structure of Choanoflagellate (Monosiga brevicollis) Dlg1 PDZ3 (mbDLG-3)
分子名称: GLYCEROL, mbDLG-3 protein
著者Mackley, I, Amacher, J.F.
登録日2020-05-19
公開日2020-11-25
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structural characterization and computational analysis of PDZ domains in Monosiga brevicollis.
Protein Sci., 29, 2020
5DTH
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BU of 5dth by Molmil
Crystal structure of MUPP1 PDZ8 domain from rattus norvegicus
分子名称: Multiple PDZ domain protein
著者Li, J, Lv, Y, Zhu, H, Liu, W.
登録日2015-09-18
公開日2016-09-14
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Crystal structure and biochemical characteristics of MUPP1 PDZ8 domain from rattus norregicus
To Be Published
6X20
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BU of 6x20 by Molmil
PDZ domain from choanoflagellate GIPC (mbGIPC) bound to B1AR peptide
分子名称: mbGIPC protein
著者Gao, M, Amacher, J.F.
登録日2020-05-19
公開日2020-11-25
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.402 Å)
主引用文献Structural characterization and computational analysis of PDZ domains in Monosiga brevicollis.
Protein Sci., 29, 2020
5D13
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BU of 5d13 by Molmil
Third PDZ domain (PDZ3) of PSD-95 complexed with CFMOC-KKETEV peptide
分子名称: CFMOC-KKETEV peptide, Disks large homolog 4
著者De, S, Spaller, M.R, Olson, R.
登録日2015-08-03
公開日2016-08-17
最終更新日2024-04-24
実験手法X-RAY DIFFRACTION (2.151 Å)
主引用文献Chemically-modified peptides as inhibitors of PDZ3 of PSD-95
to be published
6Y38
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BU of 6y38 by Molmil
Crystal structure of Whirlin PDZ3 in complex with Myosin 15a C-terminal PDZ binding motif peptide
分子名称: Chains: C,D, Whirlin
著者Zhu, Y, Delhommel, F, Haouz, A, Caillet-Saguy, C, Vaney, M, Mechaly, A.E, Wolff, N.
登録日2020-02-17
公開日2020-10-07
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.697 Å)
主引用文献Deciphering the Unexpected Binding Capacity of the Third PDZ Domain of Whirlin to Various Cochlear Hair Cell Partners.
J.Mol.Biol., 432, 2020
5E1Y
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BU of 5e1y by Molmil
PDZ2 of LNX2 at 277K, model with alternate conformations
分子名称: Ligand of Numb protein X 2
著者Hekstra, D.R, White, K.I, Socolich, M.A, Ranganathan, R.
登録日2015-09-30
公開日2016-12-07
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.011 Å)
主引用文献Electric-field-stimulated protein mechanics.
Nature, 540, 2016
5E22
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BU of 5e22 by Molmil
The second PDZ domain of Ligand of Numb protein X 2 in the presence of an electric field of ~1 MV/cm along the crystallographic x axis, with eightfold extrapolation of structure factor differences.
分子名称: GLYCEROL, Ligand of Numb protein X 2
著者Hekstra, D.R, White, K.I, Socolich, M.A, Henning, R.W, Srajer, V, Ranganathan, R.
登録日2015-09-30
公開日2016-12-07
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.797 Å)
主引用文献Electric-field-stimulated protein mechanics.
Nature, 540, 2016
5E11
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BU of 5e11 by Molmil
Second PDZ domain of Ligand of Numb protein X 2 by Laue crystallography (no electric field)
分子名称: Ligand of Numb protein X 2
著者Hekstra, D.R, White, K.I, Socolich, M.A, Henning, R.W, Srajer, V, Ranganathan, R.
登録日2015-09-29
公開日2016-12-07
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Electric-field-stimulated protein mechanics.
Nature, 540, 2016
4JOE
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BU of 4joe by Molmil
CFTR Associated Ligand (CAL) PDZ domain bound to peptide A-iCAL36 (ANSRAPTSII)
分子名称: A-iCAL36 peptide, GLYCEROL, Golgi-associated PDZ and coiled-coil motif-containing protein
著者Amacher, J.F, Madden, D.R.
登録日2013-03-18
公開日2014-01-22
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.14 Å)
主引用文献Stereochemical Preferences Modulate Affinity and Selectivity among Five PDZ Domains that Bind CFTR: Comparative Structural and Sequence Analyses.
Structure, 22, 2014
3CH8
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BU of 3ch8 by Molmil
The crystal structure of PDZ-Fibronectin fusion protein
分子名称: C-terminal octapeptide from protein ARVCF, MAGNESIUM ION, fusion protein PDZ-Fibronectin,Fibronectin
著者Makabe, K, Huang, J, Koide, A, Koide, S.
登録日2008-03-08
公開日2009-03-31
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural basis for exquisite specificity of affinity clamps, synthetic binding proteins generated through directed domain-interface evolution.
J.Mol.Biol., 392, 2009
6Y9P
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BU of 6y9p by Molmil
Crystal structure of Whirlin PDZ3_C-ter in complex with Harmonin a1 C-terminal PDZ binding motif peptide
分子名称: Harmonin a1, Whirlin
著者Zhu, Y, Delhommel, F, Haouz, A, Caillet-Saguy, C, Vaney, M, Mechaly, A.E, Wolff, N.
登録日2020-03-10
公開日2020-10-07
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (3.169 Å)
主引用文献Deciphering the Unexpected Binding Capacity of the Third PDZ Domain of Whirlin to Various Cochlear Hair Cell Partners.
J.Mol.Biol., 432, 2020
4JOH
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BU of 4joh by Molmil
CFTR Associated Ligand (CAL) PDZ domain bound to peptide H-iCAL36 (ANSRHPTSII)
分子名称: GLYCEROL, Golgi-associated PDZ and coiled-coil motif-containing protein, H-iCAL36 peptide
著者Amacher, J.F, Madden, D.R.
登録日2013-03-18
公開日2014-01-22
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.47 Å)
主引用文献Stereochemical Preferences Modulate Affinity and Selectivity among Five PDZ Domains that Bind CFTR: Comparative Structural and Sequence Analyses.
Structure, 22, 2014
5ELQ
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BU of 5elq by Molmil
Crystal structure of the SNX27 PDZ domain bound to the C-terminal DGKzeta PDZ binding motif
分子名称: GLU-ASP-GLN-GLU-THR-ALA-VAL, Sorting nexin-27, TETRAETHYLENE GLYCOL
著者Collins, B.M, Clairfeuille, T.
登録日2015-11-05
公開日2016-09-07
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献A molecular code for endosomal recycling of phosphorylated cargos by the SNX27-retromer complex.
Nat.Struct.Mol.Biol., 23, 2016
5EM9
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BU of 5em9 by Molmil
Crystal structure of the SNX27 PDZ domain bound to the phosphorylated C-terminal 5HT4(a)R PDZ binding motif
分子名称: SEP-LEU-GLU-SER-CYS-PHE, Sorting nexin-27
著者Collins, B.M, Clairfeuille, T.
登録日2015-11-06
公開日2016-09-07
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献A molecular code for endosomal recycling of phosphorylated cargos by the SNX27-retromer complex.
Nat.Struct.Mol.Biol., 23, 2016
4JOF
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BU of 4jof by Molmil
CFTR Associated Ligand (CAL) PDZ domain bound to peptide L-iCAL36 (ANSRLPTSII)
分子名称: GLYCEROL, Golgi-associated PDZ and coiled-coil motif-containing protein, L-iCAL36 peptide
著者Amacher, J.F, Madden, D.R.
登録日2013-03-18
公開日2014-01-22
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Stereochemical Preferences Modulate Affinity and Selectivity among Five PDZ Domains that Bind CFTR: Comparative Structural and Sequence Analyses.
Structure, 22, 2014
4JOR
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BU of 4jor by Molmil
CFTR Associated Ligand (CAL) PDZ domain bound to HPV18 E6 oncoprotein C-terminal peptide (RLQRRRETQV)
分子名称: GLYCEROL, Golgi-associated PDZ and coiled-coil motif-containing protein, Protein E6
著者Amacher, J.F, Madden, D.R.
登録日2013-03-18
公開日2014-01-22
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.34 Å)
主引用文献Stereochemical Preferences Modulate Affinity and Selectivity among Five PDZ Domains that Bind CFTR: Comparative Structural and Sequence Analyses.
Structure, 22, 2014
3E17
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Crystal structure of the second PDZ domain from human Zona Occludens-2
分子名称: Tight junction protein ZO-2
著者Chen, H, Tong, S.L, Teng, M.K, Niu, L.W.
登録日2008-08-01
公開日2009-07-21
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structure of the second PDZ domain from human zonula occludens 2
Acta Crystallogr.,Sect.F, 65, 2009

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件を2024-06-26に公開中

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