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PDB: 62 件

6G1Y
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BU of 6g1y by Molmil
Crystal structure of the photosensory core module (PCM) of a bathy phytochrome from Agrobacterium fabrum in the Pfr state.
分子名称: 3-[(2Z)-2-({3-(2-carboxyethyl)-5-[(E)-(4-ethenyl-3-methyl-5-oxo-1,5-dihydro-2H-pyrrol-2-ylidene)methyl]-4-methyl-1H-pyrrol-2-yl}methylidene)-5-{(Z)-[(3E,4S)-3-ethylidene-4-methyl-5-oxopyrrolidin-2-ylidene]methyl}-4-methyl-2H-pyrrol-3-yl]propanoic acid, Bacteriophytochrome protein
著者Schmidt, A, Qureshi, B.M, Scheerer, P.
登録日2018-03-22
公開日2018-11-28
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural snapshot of a bacterial phytochrome in its functional intermediate state.
Nat Commun, 9, 2018
6G20
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BU of 6g20 by Molmil
Crystal structure of a fluorescence optimized bathy phytochrome PAiRFP2 derived from wild-type Agp2 in its functional Meta-F intermediate state.
分子名称: 2-(2-METHOXYETHOXY)ETHANOL, 2-{2-[2-2-(METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, 3-[(2Z)-2-({3-(2-carboxyethyl)-5-[(E)-(4-ethenyl-3-methyl-5-oxo-1,5-dihydro-2H-pyrrol-2-ylidene)methyl]-4-methyl-1H-pyrrol-2-yl}methylidene)-5-{(Z)-[(3E,4S)-3-ethylidene-4-methyl-5-oxopyrrolidin-2-ylidene]methyl}-4-methyl-2H-pyrrol-3-yl]propanoic acid, ...
著者Schmidt, A, Sauthof, L, Szczepek, M, Scheerer, P.
登録日2018-03-22
公開日2018-11-28
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.16 Å)
主引用文献Structural snapshot of a bacterial phytochrome in its functional intermediate state.
Nat Commun, 9, 2018
4OUR
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BU of 4our by Molmil
Crystal structure of Arabidopsis thaliana phytochrome B photosensory module
分子名称: 3-[5-[[(3~{R},4~{R})-3-ethyl-4-methyl-5-oxidanylidene-3,4-dihydropyrrol-2-yl]methyl]-2-[[5-[(4-ethyl-3-methyl-5-oxidanylidene-pyrrol-2-yl)methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-1~{H}-pyrrol-2-yl]methyl]-4-methyl-1~{H}-pyrrol-3-yl]propanoic acid, GLYCEROL, Phytochrome B, ...
著者Sethe Burgie, E, Bussell, A.N, Walker, J.M, Dubiel, K, Vierstra, R.D.
登録日2014-02-18
公開日2014-07-16
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Crystal structure of the photosensing module from a red/far-red light-absorbing plant phytochrome.
Proc.Natl.Acad.Sci.USA, 111, 2014
4O01
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BU of 4o01 by Molmil
Crystal Structure of D. radiodurans Bacteriophytochrome Photosensory Core Module in its Illuminated Form
分子名称: 3-[2-[(Z)-[3-(2-carboxyethyl)-5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-4-methyl-pyrrol-1-ium -2-ylidene]methyl]-5-[(Z)-[(3E)-3-ethylidene-4-methyl-5-oxidanylidene-pyrrolidin-2-ylidene]methyl]-4-methyl-1H-pyrrol-3- yl]propanoic acid, Bacteriophytochrome
著者Takala, H, Ihalainen, J.A, Westenhoff, S.
登録日2013-12-13
公開日2014-05-07
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.24 Å)
主引用文献Signal amplification and transduction in phytochrome photosensors
Nature, 509, 2014
4O0P
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BU of 4o0p by Molmil
Crystal Structure of D. radiodurans Bacteriophytochrome Photosensory Core Module in its Dark Form
分子名称: 3-[2-[(Z)-[3-(2-carboxyethyl)-5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-4-methyl-pyrrol-1-ium -2-ylidene]methyl]-5-[(Z)-[(3E)-3-ethylidene-4-methyl-5-oxidanylidene-pyrrolidin-2-ylidene]methyl]-4-methyl-1H-pyrrol-3- yl]propanoic acid, Bacteriophytochrome
著者Takala, H, Ihalainen, J.A, Westenhoff, S.
登録日2013-12-14
公開日2014-05-07
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.8 Å)
主引用文献Signal amplification and transduction in phytochrome photosensors
Nature, 509, 2014
4R70
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BU of 4r70 by Molmil
Crystal structure of bacteriophytochrome RpBphP3 from photosynthetic bacterium R. palustris
分子名称: BILIVERDINE IX ALPHA, Bacteriophytochrome (Light-regulated signal transduction histidine kinase), PhyB2
著者Yang, X, Kuk, J, Moffat, K.
登録日2014-08-26
公開日2015-07-15
最終更新日2015-08-05
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Light Signaling Mechanism of Two Tandem Bacteriophytochromes.
Structure, 23, 2015
4Q0J
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BU of 4q0j by Molmil
Deinococcus radiodurans BphP photosensory module
分子名称: 3-[2-[(Z)-[3-(2-carboxyethyl)-5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-4-methyl-pyrrol-1-ium-2-ylidene]methyl]-5-[(Z)-[(3E)-3-ethylidene-4-methyl-5-oxidanylidene-pyrrolidin-2-ylidene]methyl]-4-methyl-1H-pyrrol-3-yl]propanoic acid, Bacteriophytochrome
著者Burgie, E.S, Vierstra, R.D.
登録日2014-04-02
公開日2014-07-16
最終更新日2014-09-17
実験手法X-RAY DIFFRACTION (2.747 Å)
主引用文献Crystallographic and Electron Microscopic Analyses of a Bacterial Phytochrome Reveal Local and Global Rearrangements during Photoconversion.
J.Biol.Chem., 289, 2014
4R6L
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BU of 4r6l by Molmil
Crystal structure of bacteriophytochrome RpBphP2 from photosynthetic bacterium R. palustris
分子名称: BILIVERDINE IX ALPHA, Bacteriophytochrome (Light-regulated signal transduction histidine kinase), PhyB1
著者Yang, X, Stojkovic, E, Ozarowski, W, Kuk, J, Davydova, E, Moffat, K.
登録日2014-08-25
公開日2015-07-22
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.395 Å)
主引用文献Light Signaling Mechanism of Two Tandem Bacteriophytochromes.
Structure, 23, 2015
8AVW
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BU of 8avw by Molmil
Cryo-EM structure of DrBphP in Pr state
分子名称: 3-[2-[(Z)-[3-(2-carboxyethyl)-5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-4-methyl-pyrrol-1-ium -2-ylidene]methyl]-5-[(Z)-[(3E)-3-ethylidene-4-methyl-5-oxidanylidene-pyrrolidin-2-ylidene]methyl]-4-methyl-1H-pyrrol-3- yl]propanoic acid, Bacteriophytochrome,Response regulator
著者Wahlgren, W.Y, Takala, H, Westenhoff, S.
登録日2022-08-27
公開日2022-12-21
最終更新日2022-12-28
実験手法ELECTRON MICROSCOPY (3.62 Å)
主引用文献Structural mechanism of signal transduction in a phytochrome histidine kinase.
Nat Commun, 13, 2022
8AVX
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BU of 8avx by Molmil
Cryo-EM structure of DrBphP in Pfr state
分子名称: BILIVERDINE IX ALPHA, Bacteriophytochrome,Response regulator
著者Wahlgren, W.Y, Takala, H, Westenhoff, S.
登録日2022-08-27
公開日2022-12-21
最終更新日2022-12-28
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structural mechanism of signal transduction in a phytochrome histidine kinase.
Nat Commun, 13, 2022
8AVV
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BU of 8avv by Molmil
Cryo-EM structure of DrBphP photosensory module in Pr state
分子名称: 3-[2-[(Z)-[3-(2-carboxyethyl)-5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-4-methyl-pyrrol-1-ium -2-ylidene]methyl]-5-[(Z)-[(3E)-3-ethylidene-4-methyl-5-oxidanylidene-pyrrolidin-2-ylidene]methyl]-4-methyl-1H-pyrrol-3- yl]propanoic acid, Bacteriophytochrome,Response regulator
著者Wahlgren, W.Y, Takala, H, Westenhoff, S.
登録日2022-08-27
公開日2022-12-21
最終更新日2022-12-28
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structural mechanism of signal transduction in a phytochrome histidine kinase.
Nat Commun, 13, 2022
6FHT
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BU of 6fht by Molmil
Crystal structure of an artificial phytochrome regulated adenylate/guanylate cyclase in its dark adapted Pr form
分子名称: 3-[2-[(Z)-[3-(2-carboxyethyl)-5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-4-methyl-pyrrol-1-ium -2-ylidene]methyl]-5-[(Z)-[(3E)-3-ethylidene-4-methyl-5-oxidanylidene-pyrrolidin-2-ylidene]methyl]-4-methyl-1H-pyrrol-3- yl]propanoic acid, Bacteriophytochrome,Adenylate cyclase, DODECAETHYLENE GLYCOL, ...
著者Etzl, S, Winkler, A.
登録日2018-01-15
公開日2018-04-18
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Structure-guided design and functional characterization of an artificial red light-regulated guanylate/adenylate cyclase for optogenetic applications.
J. Biol. Chem., 293, 2018
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件を2024-06-12に公開中

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