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PDB: 1515 件

7QVP
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Human collided disome (di-ribosome) stalled on XBP1 mRNA
分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S10, ...
著者Denk, T.G, Tesina, P, Beckmann, R.
登録日2022-01-22
公開日2022-10-12
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献A distinct mammalian disome collision interface harbors K63-linked polyubiquitination of uS10 to trigger hRQT-mediated subunit dissociation.
Nat Commun, 13, 2022
7PUB
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Late assembly intermediate of the Trypanosoma brucei mitoribosomal small subunit
分子名称: 30S Ribosomal protein S17, putative, 30S ribosomal protein S8, ...
著者Lenarcic, T, Leibundgut, M, Saurer, M, Ramrath, D.J.F, Fluegel, T, Boehringer, D, Ban, N.
登録日2021-09-29
公開日2022-05-04
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Mitoribosomal small subunit maturation involves formation of initiation-like complexes.
Proc.Natl.Acad.Sci.USA, 119, 2022
7PZY
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Structure of the vacant Candida albicans 80S ribosome
分子名称: 1,4-DIAMINOBUTANE, 18S ribosomal RNA, 25S ribosomal RNA, ...
著者Zgadzay, Y, Kolosova, O, Stetsenko, A, Jenner, L, Guskov, A, Yusupova, G, Yusupov, M.
登録日2021-10-13
公開日2022-05-18
最終更新日2022-06-08
実験手法ELECTRON MICROSCOPY (2.32 Å)
主引用文献E-site drug specificity of the human pathogen Candida albicans ribosome.
Sci Adv, 8, 2022
7Q0P
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Structure of the Candida albicans 80S ribosome in complex with anisomycin
分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0, ...
著者Kolosova, O, Zgadzay, Y, Stetsenko, A, Jenner, L, Guskov, A, Yusupova, G, Yusupov, M.
登録日2021-10-15
公開日2022-05-18
最終更新日2022-06-08
実験手法ELECTRON MICROSCOPY (2.77 Å)
主引用文献E-site drug specificity of the human pathogen Candida albicans ribosome.
Sci Adv, 8, 2022
7Q0F
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Structure of Candida albicans 80S ribosome in complex with phyllanthoside
分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 3-O-acetyl-2-O-(3-O-acetyl-6-deoxy-beta-D-glucopyranosyl)-6-deoxy-1-O-{[(2R,2'S,3a'R,4''S,5''R,6'S,7a'S)-5''-methyl-4''-{[(2E)-3-phenylprop-2-enoyl]oxy}decahydrodispiro[oxirane-2,3'-[1]benzofuran-2',2''-pyran]-6'-yl]carbonyl}-beta-D-glucopyranose, ...
著者Zgadzay, Y, Kolosova, O, Stetsenko, A, Jenner, L, Guskov, A, Yusupova, G, Yusupov, M.
登録日2021-10-14
公開日2022-05-18
最終更新日2022-06-08
実験手法ELECTRON MICROSCOPY (2.64 Å)
主引用文献E-site drug specificity of the human pathogen Candida albicans ribosome.
Sci Adv, 8, 2022
7QIZ
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Specific features and methylation sites of a plant 80S ribosome
分子名称: 1,4-DIAMINOBUTANE, 18S, 25S rRNA, ...
著者Cottilli, P, Itoh, Y, Amunts, A.
登録日2021-12-16
公開日2022-08-03
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (2.38 Å)
主引用文献Cryo-EM structure and rRNA modification sites of a plant ribosome.
Plant Commun., 3, 2022
7QCA
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Spraguea lophii ribosome
分子名称: 40S Ribosomal protein S19, 40S ribosomal protein S0, 40S ribosomal protein S10, ...
著者Gil Diez, P, McLaren, M, Isupov, M.N, Daum, B, Conners, R, Williams, B.
登録日2021-11-22
公開日2022-11-30
最終更新日2023-12-20
実験手法ELECTRON MICROSCOPY (2.79 Å)
主引用文献CryoEM reveals that ribosomes in microsporidian spores are locked in a dimeric hibernating state
Nat Microbiol, 2023
8IFE
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Arbekacin-added human 80S ribosome
分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S10, ...
著者Tomono, J, Asano, K, Chiashi, T, Tanaka, Y, Yokoyama, T.
登録日2023-02-17
公開日2024-02-14
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (2.57 Å)
主引用文献Direct visualization of ribosomes in the cell-free system revealed the functional evolution of aminoglycoside.
J.Biochem., 175, 2024
8IP8
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Wheat 80S ribosome stalled on AUG-Stop boron dependently
分子名称: 18S ribosomal RNA, 40S ribosomal protein eL8, 40S ribosomal protein eS1, ...
著者Yokoyama, T, Tanaka, M, Saito, H, Nishimoto, M, Tsuda, K, Sotta, N, Shigematsu, H, Shirouzu, M, Iwasaki, S, Ito, T, Fujiwara, T.
登録日2023-03-14
公開日2024-02-21
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Boric acid intercepts 80S ribosome migration from AUG-stop by stabilizing eRF1.
Nat.Chem.Biol., 20, 2024
8I7J
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BU of 8i7j by Molmil
Yeast 40S-eIF4B - partially open conformation of the 40S head
分子名称: 40S ribosomal protein S0, 40S ribosomal protein S1, 40S ribosomal protein S12, ...
著者Datey, A, Khaja, F.T, Hussain, T.
登録日2023-01-31
公開日2024-02-07
実験手法ELECTRON MICROSCOPY (4.6 Å)
主引用文献Yeast eukaryotic initiation factor 4B remodels the mRNA entry site on the small ribosomal subunit
To Be Published
8IFD
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BU of 8ifd by Molmil
Dibekacin-added human 80S ribosome
分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S10, ...
著者Tomono, J, Asano, K, Chiashi, T, Tanaka, Y, Yokoyama, T.
登録日2023-02-17
公開日2024-02-14
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (2.59 Å)
主引用文献Direct visualization of ribosomes in the cell-free system revealed the functional evolution of aminoglycoside.
J.Biochem., 175, 2024
8J07
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BU of 8j07 by Molmil
96nm repeat of human respiratory doublet microtubule and associated axonemal complexes
分子名称: ACTA2, Axonemal dynein light intermediate polypeptide 1, Calaxin, ...
著者Gui, M, Brown, A.
登録日2023-04-09
公開日2023-07-26
最終更新日2023-08-02
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Axonemal structures reveal mechanoregulatory and disease mechanisms.
Nature, 618, 2023
8JDM
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Structure of the Human cytoplasmic Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAU) (rotated state)
分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S10, ...
著者Ishiguro, K, Yokoyama, T, Shirouzu, M, Suzuki, T.
登録日2023-05-14
公開日2023-12-06
最終更新日2023-12-27
実験手法ELECTRON MICROSCOPY (2.67 Å)
主引用文献Glycosylated queuosines in tRNAs optimize translational rate and post-embryonic growth.
Cell, 186, 2023
8JDL
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BU of 8jdl by Molmil
Structure of the Human cytoplasmic Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAU) (non-rotated state)
分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S10, ...
著者Ishiguro, K, Yokoyama, T, Shirouzu, M, Suzuki, T.
登録日2023-05-14
公開日2023-12-06
最終更新日2023-12-27
実験手法ELECTRON MICROSCOPY (2.42 Å)
主引用文献Glycosylated queuosines in tRNAs optimize translational rate and post-embryonic growth.
Cell, 186, 2023
8JDJ
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BU of 8jdj by Molmil
Structure of the Human cytoplasmic Ribosome with human tRNA Asp(Q34) and mRNA(GAU)
分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S10, ...
著者Ishiguro, K, Yokoyama, T, Shirouzu, M, Suzuki, T.
登録日2023-05-14
公開日2023-12-06
最終更新日2023-12-27
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献Glycosylated queuosines in tRNAs optimize translational rate and post-embryonic growth.
Cell, 186, 2023
8JDK
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BU of 8jdk by Molmil
Structure of the Human cytoplasmic Ribosome with human tRNA Asp(ManQ34) and mRNA(GAU)
分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S10, ...
著者Ishiguro, K, Yokoyama, T, Shirouzu, M, Suzuki, T.
登録日2023-05-14
公開日2023-12-06
最終更新日2023-12-27
実験手法ELECTRON MICROSCOPY (2.26 Å)
主引用文献Glycosylated queuosines in tRNAs optimize translational rate and post-embryonic growth.
Cell, 186, 2023
5XY3
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BU of 5xy3 by Molmil
Large subunit of Trichomonas vaginalis ribosome
分子名称: 25S ribosomal RNA, 5.8S ribosomal RNA, 5S ribosomal RNA, ...
著者Li, Z, Guo, Q, Zheng, L, Ji, Y, Xie, Y, Lai, D, Lun, Z, Suo, X, Gao, N.
登録日2017-07-06
公開日2017-08-30
最終更新日2019-12-18
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Cryo-EM structures of the 80S ribosomes from human parasites Trichomonas vaginalis and Toxoplasma gondii
Cell Res., 27, 2017
5XXU
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BU of 5xxu by Molmil
Small subunit of Toxoplasma gondii ribosome
分子名称: 18S RNA, Ribosomal protein eL41, Ribosomal protein eS1, ...
著者LI, Z, Guo, Q, Zheng, L, Ji, Y, Xie, Y, Lai, D, Lun, Z, Suo, X, Gao, N.
登録日2017-07-05
公開日2017-08-30
最終更新日2018-10-24
実験手法ELECTRON MICROSCOPY (3.35 Å)
主引用文献Cryo-EM structures of the 80S ribosomes from human parasites Trichomonas vaginalis and Toxoplasma gondii
Cell Res., 27, 2017
5WYJ
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BU of 5wyj by Molmil
Cryo-EM structure of the 90S small subunit pre-ribosome (Dhr1-depleted, Enp1-TAP, state 1)
分子名称: 13 kDa ribonucleoprotein-associated protein, 18S ribosomal RNA, 40S ribosomal protein S1-A, ...
著者Ye, K, Zhu, X, Sun, Q.
登録日2017-01-13
公開日2017-03-29
最終更新日2019-10-09
実験手法ELECTRON MICROSCOPY (8.7 Å)
主引用文献Molecular architecture of the 90S small subunit pre-ribosome.
Elife, 6, 2017
5Z56
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cryo-EM structure of a human activated spliceosome (mature Bact) at 5.1 angstrom.
分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, BUD13 homolog, Cell division cycle 5-like protein, ...
著者Zhang, X, Yan, C, Zhan, X, Li, L, Lei, J, Shi, Y.
登録日2018-01-17
公開日2018-09-19
最終更新日2020-10-14
実験手法ELECTRON MICROSCOPY (5.1 Å)
主引用文献Structure of the human activated spliceosome in three conformational states.
Cell Res., 28, 2018
5Z58
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Cryo-EM structure of a human activated spliceosome (early Bact) at 4.9 angstrom.
分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, BUD13 homolog, Cell division cycle 5-like protein, ...
著者Zhang, X, Yan, C, Zhan, X, Li, L, Lei, J, Shi, Y.
登録日2018-01-17
公開日2018-09-19
最終更新日2020-10-14
実験手法ELECTRON MICROSCOPY (4.9 Å)
主引用文献Structure of the human activated spliceosome in three conformational states.
Cell Res., 28, 2018
5ZBU
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Crystal Structure of PA-TM-RING E3 ligase RNF13 RING domain in complex with E2~Ub
分子名称: E3 ubiquitin-protein ligase RNF13, Ubiquitin, Ubiquitin-conjugating enzyme E2 D2, ...
著者Datta, A.B, Sarkar, S.
登録日2018-02-12
公開日2019-02-27
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Crystal Structure of PA-TM-RING E3 ligase RNF13 RING domain in complex with E2~Ub
To Be Published
5Z57
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Cryo-EM structure of the human activated spliceosome (late Bact) at 6.5 angstrom
分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, ALANINE, BUD13 homolog, ...
著者Zhang, X, Yan, C, Zhan, X, Li, L, Lei, J, Shi, Y.
登録日2018-01-17
公開日2018-09-19
最終更新日2020-10-14
実験手法ELECTRON MICROSCOPY (6.5 Å)
主引用文献Structure of the human activated spliceosome in three conformational states.
Cell Res., 28, 2018
6AH0
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BU of 6ah0 by Molmil
The Cryo-EM Structure of the Precusor of Human Pre-catalytic Spliceosome (pre-B complex)
分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, GUANOSINE-5'-TRIPHOSPHATE, INOSITOL HEXAKISPHOSPHATE, ...
著者Zhan, X, Yan, C, Zhang, X, Shi, Y.
登録日2018-08-15
公開日2018-11-14
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (5.7 Å)
主引用文献Structures of the human pre-catalytic spliceosome and its precursor spliceosome.
Cell Res., 28, 2018
6I5J
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Crystal structure of SOCS2:Elongin C:Elongin B in complex with growth hormone receptor peptide
分子名称: COBALT (II) ION, Elongin-B, Elongin-C, ...
著者Kung, W.W, Ramachandran, S, Makukhin, N, Bruno, E, Ciulli, A.
登録日2018-11-13
公開日2019-05-29
最終更新日2019-11-20
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural insights into substrate recognition by the SOCS2 E3 ubiquitin ligase.
Nat Commun, 10, 2019

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件を2024-07-31に公開中

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