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PDB: 1515 件

4EEW
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BU of 4eew by Molmil
Crystal structure of the Ubl domain of BAG6
分子名称: Large proline-rich protein BAG6
著者Kozlov, G, LePage, K, Vinaik, R, Gehring, K.
登録日2012-03-28
公開日2012-04-11
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Crystal structure of the Ubl domain of BAG6
To be Published
1AAR
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BU of 1aar by Molmil
STRUCTURE OF A DIUBIQUITIN CONJUGATE AND A MODEL FOR INTERACTION WITH UBIQUITIN CONJUGATING ENZYME (E2)
分子名称: DI-UBIQUITIN
著者Cook, W.J, Jeffrey, L.C, Carson, M, Chen, Z, Pickart, C.M.
登録日1992-04-17
公開日1993-10-31
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure of a diubiquitin conjugate and a model for interaction with ubiquitin conjugating enzyme (E2).
J.Biol.Chem., 267, 1992
6KOW
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BU of 6kow by Molmil
Retracted state of S65/T66 double-phosphorylated ubiquitin
分子名称: Polyubiquitin-B
著者Dong, X, Tang, C.
登録日2019-08-13
公開日2019-08-28
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Ubiquitin is double-phosphorylated by PINK1 for enhanced pH-sensitivity of conformational switch.
Protein Cell, 10, 2019
2DZI
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BU of 2dzi by Molmil
2DZI/Solution Structure of the N-terminal Ubiquitin-like Domain in Human Ubiquitin-like Protein 4A (GDX)
分子名称: Ubiquitin-like protein 4A
著者Zhao, C, Sato, M, Koshiba, S, Watanabe, S, Harada, T, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-09-29
公開日2007-03-29
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献2DZI/Solution Structure of the N-terminal Ubiquitin-like Domain in Human Ubiquitin-like Protein 4A (GDX)
To be Published
1J8C
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Solution Structure of the Ubiquitin-like Domain of hPLIC-2
分子名称: ubiquitin-like protein hPLIC-2
著者Walters, K.J, Kleijnen, M.F, Goh, A.M, Wagner, G, Howley, P.M.
登録日2001-05-21
公開日2002-03-20
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structural studies of the interaction between ubiquitin family proteins and proteasome subunit S5a.
Biochemistry, 41, 2002
1IYF
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BU of 1iyf by Molmil
Solution structure of ubiquitin-like domain of human parkin
分子名称: parkin
著者Sakata, E, Yamaguchi, Y, Kurimoto, E, Kikuchi, J, Yokoyama, S, Kawahara, H, Yokosawa, H, Hattori, N, Mizuno, Y, Tanaka, K, Kato, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2002-08-13
公開日2003-03-25
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Parkin binds the Rpn10 subunit of 26S proteasomes through its ubiquitin-like domain
EMBO REP., 4, 2003
1G6J
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STRUCTURE OF RECOMBINANT HUMAN UBIQUITIN IN AOT REVERSE MICELLES
分子名称: UBIQUITIN
著者Babu, C.R, Flynn, P.F, Wand, A.J.
登録日2000-11-06
公開日2001-03-28
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Validation of protein structure from preparations of encapsulated proteins dissolved in low viscosity fluids.
J.Am.Chem.Soc., 123, 2001
6E2B
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BU of 6e2b by Molmil
Ubiquitin in complex with Pt(2-phenilpyridine)(PPh3)
分子名称: GLYCEROL, SULFATE ION, Ubiquitin, ...
著者Zhemkov, V.A, Kim, M.
登録日2018-07-11
公開日2018-11-14
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Reactions of Cyclometalated Platinum(II) [Pt(N∧C)(PR3)Cl] Complexes with Imidazole and Imidazole-Containing Biomolecules: Fine-Tuning of Reactivity and Photophysical Properties via Ligand Design.
Inorg Chem, 58, 2019
1UBI
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BU of 1ubi by Molmil
SYNTHETIC STRUCTURAL AND BIOLOGICAL STUDIES OF THE UBIQUITIN SYSTEM. PART 1
分子名称: UBIQUITIN
著者Alexeev, D, Bury, S.M, Turner, M.A, Ogunjobi, O.M, Muir, T.W, Ramage, R, Sawyer, L.
登録日1994-02-03
公開日1994-05-31
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Synthetic, structural and biological studies of the ubiquitin system: the total chemical synthesis of ubiquitin.
Biochem.J., 299, 1994
1UBQ
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BU of 1ubq by Molmil
STRUCTURE OF UBIQUITIN REFINED AT 1.8 ANGSTROMS RESOLUTION
分子名称: UBIQUITIN
著者Vijay-Kumar, S, Bugg, C.E, Cook, W.J.
登録日1987-01-02
公開日1987-04-16
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure of ubiquitin refined at 1.8 A resolution.
J.Mol.Biol., 194, 1987
1UH6
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Solution Structure of the murine ubiquitin-like 5 protein from RIKEN cDNA 0610031K06
分子名称: ubiquitin-like 5
著者Hayashi, F, Shirouzu, M, Terada, T, Kigawa, T, Inoue, M, Yabuki, T, Aoki, M, Seki, E, Matsuda, T, Hirota, H, Yoshida, M, Tanaka, A, Osanai, T, Arakawa, T, Carninci, P, Kawai, J, Hayashizaki, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2003-06-25
公開日2003-12-25
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献Solution Structure of the murine ubiquitin-like 5 protein from RIKEN cDNA 0610031K06
To be Published
1V81
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BU of 1v81 by Molmil
Solution structures of ubiquitin at 30 bar and 3 kbar
分子名称: Ubiquitin/60s ribosomal protein L40 fusion
著者Kitahara, R, Yokoyama, S, Akasaka, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2003-12-27
公開日2005-02-15
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献NMR snapshots of a fluctuating protein structure: ubiquitin at 30 bar-3 kbar.
J.Mol.Biol., 347, 2005
1V80
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BU of 1v80 by Molmil
Solution structures of ubiquitin at 30 bar and 3 kbar
分子名称: Ubiquitin/60s ribosomal protein L40 fusion
著者Kitahara, R, Yokoyama, S, Akasaka, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2003-12-27
公開日2005-02-15
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献NMR snapshots of a fluctuating protein structure: ubiquitin at 30 bar-3 kbar.
J.Mol.Biol., 347, 2005
1D3Z
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BU of 1d3z by Molmil
UBIQUITIN NMR STRUCTURE
分子名称: PROTEIN (UBIQUITIN)
著者Cornilescu, G, Marquardt, J.L, Ottiger, M, Bax, A.
登録日1999-10-01
公開日1999-10-14
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Validation of Protein Structure from Anisotropic Carbonyl Chemical Shifts in a Dilute Liquid Crystalline Phase
J.Am.Chem.Soc., 120, 1998
1C3T
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BU of 1c3t by Molmil
ROTAMER STRAIN AS A DETERMINANT OF PROTEIN STRUCTURAL SPECIFICITY
分子名称: PROTEIN (1D8 UBIQUITIN)
著者Lazar, G.A, Johnson, E.C, Desjarlais, J.R, Handel, T.M.
登録日1999-07-28
公開日1999-08-20
最終更新日2024-04-10
実験手法SOLUTION NMR
主引用文献Rotamer strain as a determinant of protein structural specificity.
Protein Sci., 8, 1999
1BT0
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BU of 1bt0 by Molmil
STRUCTURE OF UBIQUITIN-LIKE PROTEIN, RUB1
分子名称: 1,2-ETHANEDIOL, PROTEIN (UBIQUITIN-LIKE PROTEIN 7, RUB1), ...
著者Delacruz, W.P, Fisher, A.J.
登録日1998-09-02
公開日1998-12-30
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献The rub family of ubiquitin-like proteins. Crystal structure of Arabidopsis rub1 and expression of multiple rubs in Arabidopsis.
J.Biol.Chem., 273, 1998
1F9J
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BU of 1f9j by Molmil
STRUCTURE OF A NEW CRYSTAL FORM OF TETRAUBIQUITIN
分子名称: TETRAUBIQUITIN
著者Phillips, C.L, Thrower, J, Pickart, C.M, Hill, C.P.
登録日2000-07-10
公開日2001-02-07
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structure of a new crystal form of tetraubiquitin.
Acta Crystallogr.,Sect.D, 57, 2001
1GJZ
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BU of 1gjz by Molmil
Solution structure of a dimeric N-terminal fragment of human ubiquitin
分子名称: UBIQUITIN
著者Bolton, D, Evans, P.A, Stott, K, Broadhurst, R.W.
登録日2001-08-06
公開日2001-12-13
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structure and Properties of a Dimeric N-Terminal Fragment of Human Ubiquitin.
J.Mol.Biol., 314, 2001
4ZQS
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New compact conformation of linear Ub2 structure
分子名称: ubiquitin
著者Thach, T.T, Shin, D, Han, S, Lee, S.
登録日2015-05-11
公開日2016-04-20
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.804 Å)
主引用文献New conformations of linear polyubiquitin chains from crystallographic and solution-scattering studies expand the conformational space of polyubiquitin.
Acta Crystallogr D Struct Biol, 72, 2016
4ZPZ
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BU of 4zpz by Molmil
Crystal Structure of Semi-synthetic Ubiquitin with Phospho-Ser65 and Ala46Cys
分子名称: Polyubiquitin-B
著者Han, C, Virdee, S.
登録日2015-05-08
公開日2015-06-10
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.54 Å)
主引用文献A Versatile Strategy for the Semisynthetic Production of Ser65 Phosphorylated Ubiquitin and Its Biochemical and Structural Characterisation.
Chembiochem, 16, 2015
4Z9S
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BU of 4z9s by Molmil
Non-covalent assembly of monoubiquitin that mimics K11 poly-ubiquitin
分子名称: MALONIC ACID, THIOCYANATE ION, Ubiquitin-40S ribosomal protein S27a
著者Levin-Kravets, O, Prag, G.
登録日2015-04-11
公開日2015-07-29
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Tetrameric Assembly of Monoubiquitin Accurately Mimics the Lys11 Polyubiquitin Chain Structure.
Biochemistry, 54, 2015
2RU6
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The pure alternative state of ubiquitin
分子名称: Ubiquitin
著者Kitazawa, S, Kameda, T, Kumo, A, Utsumi, M, Baxter, N, Kato, K, Williamson, M.P, Kitahara, R.
登録日2013-12-04
公開日2014-02-12
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Close Identity between Alternatively Folded State N2 of Ubiquitin and the Conformation of the Protein Bound to the Ubiquitin-Activating Enzyme
Biochemistry, 53, 2014
2RSU
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Alternative structure of Ubiquitin
分子名称: Ubiquitin
著者Kitazawa, S, Kameda, T, Yagi-Utsumi, M, Kato, K, Kitahara, R.
登録日2012-06-15
公開日2013-03-27
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution Structure of the Q41N Variant of Ubiquitin as a Model for the Alternatively Folded N2 State of Ubiquitin
Biochemistry, 52, 2013
2W9N
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crystal structure of linear di-ubiquitin
分子名称: CHLORIDE ION, UBIQUITIN, ZINC ION
著者Komander, D, Reyes-Turcu, F, Wilkinson, K.D, Barford, D.
登録日2009-01-27
公開日2009-04-28
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Molecular Discrimination of Structurally Equivalent Lys 63-Linked and Linear Polyubiquitin Chains.
Embo Rep., 10, 2009
2WX1
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TAB2 NZF DOMAIN IN COMPLEX WITH Lys63-linked tri-ubiquitin, P212121
分子名称: MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 7-INTERACTING PROTEIN 2, UBIQUITIN, ZINC ION
著者Kulathu, Y, Akutsu, M, Bremm, A, Hofmann, K, Komander, D.
登録日2009-10-30
公開日2009-11-24
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Two-Sided Ubiquitin Binding Explains Specificity of the Tab2 Nzf Domain
Nat.Struct.Mol.Biol., 16, 2009

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