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PDB: 338 件
5VEY
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BU of 5vey by Molmil
Solution NMR structure of histone H2A-H2B mono-ubiquitylated at H2A Lys15 in complex with RNF169 (653-708)
分子名称: E3 ubiquitin-protein ligase RNF169, Histone H2B type 1-J,Histone H2A type 1-B/E, Polyubiquitin-B
著者Hu, Q, Botuyan, M.V, Cui, G, Mer, G.
登録日2017-04-06
公開日2017-05-17
最終更新日2022-02-23
実験手法SOLUTION NMR
主引用文献Mechanisms of Ubiquitin-Nucleosome Recognition and Regulation of 53BP1 Chromatin Recruitment by RNF168/169 and RAD18.
Mol. Cell, 66, 2017
6KOX
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BU of 6kox by Molmil
Relaxed state of S65/T66 double-phosphorylated ubiquitin
分子名称: Polyubiquitin-B
著者Dong, X, Tang, C.
登録日2019-08-13
公開日2019-08-28
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Ubiquitin is double-phosphorylated by PINK1 for enhanced pH-sensitivity of conformational switch.
Protein Cell, 10, 2019
6UYJ
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BU of 6uyj by Molmil
hRpn13:hRpn2:K48-diubiquitin
分子名称: 26S proteasome non-ATPase regulatory subunit 1, Proteasomal ubiquitin receptor ADRM1, Ubiquitin
著者Lu, X, Walters, K.J.
登録日2019-11-13
公開日2020-03-11
最終更新日2020-05-20
実験手法SOLUTION NMR
主引用文献An Extended Conformation for K48 Ubiquitin Chains Revealed by the hRpn2:Rpn13:K48-Diubiquitin Structure.
Structure, 28, 2020
6QF8
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BU of 6qf8 by Molmil
Solution NMR ensemble for human ubiquitin at 298K compiled using the CoMAND method
分子名称: Polyubiquitin-B
著者ElGamacy, M, Truffault, V, Zhu, H, Coles, M.
登録日2019-01-09
公開日2019-04-10
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Mapping Local Conformational Landscapes of Proteins in Solution.
Structure, 27, 2019
2MBB
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BU of 2mbb by Molmil
Solution Structure of the human Polymerase iota UBM1-Ubiquitin Complex
分子名称: Immunoglobulin G-binding protein G/DNA polymerase iota fusion protein, Polyubiquitin-B
著者Wang, S, Zhou, P.
登録日2013-07-29
公開日2014-06-04
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Sparsely-sampled, high-resolution 4-D omit spectra for detection and assignment of intermolecular NOEs of protein complexes.
J.Biomol.Nmr, 59, 2014
1Q5W
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BU of 1q5w by Molmil
Ubiquitin Recognition by Npl4 Zinc-Fingers
分子名称: Ubiquitin, ZINC ION, homolog of yeast nuclear protein localization 4
著者Alam, S.L, Sun, J, Payne, M, Welch, B.D, Blake, B.K, Davis, D.R, Meyer, H.H, Emr, S.D, Sundquist, W.I.
登録日2003-08-11
公開日2004-03-30
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Ubiquitin interactions of NZF zinc fingers.
Embo J., 23, 2004
6XQC
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BU of 6xqc by Molmil
UbKEKS
分子名称: Polyubiquitin-B
著者Delattre, P, Letourneau, D, Lavigne, P, Roucou, X, Boisvert, F.M.
登録日2020-07-09
公開日2021-05-19
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution NMR structure of UbKEKS
To Be Published
6UYI
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BU of 6uyi by Molmil
hRpn13:hRpn2:K48-diubiquitin
分子名称: 26S proteasome non-ATPase regulatory subunit 1, Proteasomal ubiquitin receptor ADRM1, Ubiquitin
著者Lu, X, Walters, K.J.
登録日2019-11-13
公開日2020-03-11
最終更新日2022-03-16
実験手法SOLUTION NMR
主引用文献An Extended Conformation for K48 Ubiquitin Chains Revealed by the hRpn2:Rpn13:K48-Diubiquitin Structure.
Structure, 28, 2020
2FUH
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BU of 2fuh by Molmil
Solution Structure of the UbcH5c/Ub Non-covalent Complex
分子名称: Ubiquitin, Ubiquitin-conjugating enzyme E2 D3
著者Brzovic, P.S, Lissounov, A, Hoyt, D.W, Klevit, R.E.
登録日2006-01-26
公開日2006-03-28
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献A UbcH5/Ubiquitin Noncovalent Complex Is Required for Processive BRCA1-Directed Ubiquitination.
Mol.Cell, 21, 2006
6N13
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BU of 6n13 by Molmil
UbcH7-Ub Complex with R0RBR Parkin and phosphoubiquitin
分子名称: E3 ubiquitin-protein ligase parkin, Ubiquitin-conjugating enzyme E2 L3, ZINC ION, ...
著者Condos, T.E.C, Dunkerley, K.M, Freeman, E.A, Barber, K.R, Aguirre, J.D, Chaugule, V.K, Xiao, Y, Konermann, L, Walden, H, Shaw, G.S.
登録日2018-11-08
公開日2018-11-28
最終更新日2020-01-08
実験手法SOLUTION NMR
主引用文献Synergistic recruitment of UbcH7~Ub and phosphorylated Ubl domain triggers parkin activation.
EMBO J., 37, 2018
6KOW
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BU of 6kow by Molmil
Retracted state of S65/T66 double-phosphorylated ubiquitin
分子名称: Polyubiquitin-B
著者Dong, X, Tang, C.
登録日2019-08-13
公開日2019-08-28
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Ubiquitin is double-phosphorylated by PINK1 for enhanced pH-sensitivity of conformational switch.
Protein Cell, 10, 2019
1C3T
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BU of 1c3t by Molmil
ROTAMER STRAIN AS A DETERMINANT OF PROTEIN STRUCTURAL SPECIFICITY
分子名称: PROTEIN (1D8 UBIQUITIN)
著者Lazar, G.A, Johnson, E.C, Desjarlais, J.R, Handel, T.M.
登録日1999-07-28
公開日1999-08-20
最終更新日2024-04-10
実験手法SOLUTION NMR
主引用文献Rotamer strain as a determinant of protein structural specificity.
Protein Sci., 8, 1999
6OQ2
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BU of 6oq2 by Molmil
NMR Structure of Branched K11/K48-Linked Tri-Ubiquitin
分子名称: Ubiquitin
著者Boughton, A.J, Fushman, D.
登録日2019-04-25
公開日2019-10-23
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Branching via K11 and K48 Bestows Ubiquitin Chains with a Unique Interdomain Interface and Enhanced Affinity for Proteasomal Subunit Rpn1.
Structure, 28, 2020
5XBO
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BU of 5xbo by Molmil
Lanthanoid tagging via an unnatural amino acid for protein structure characterization
分子名称: Polyubiquitin-B, TERBIUM(III) ION, UV excision repair protein RAD23 homolog A
著者Jiang, W, Gu, X, Dong, X, Tang, C.
登録日2017-03-21
公開日2017-05-31
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Lanthanoid tagging via an unnatural amino acid for protein structure characterization
J. Biomol. NMR, 67, 2017
2BGF
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BU of 2bgf by Molmil
NMR structure of Lys48-linked di-ubiquitin using chemical shift perturbation data together with RDCs and 15N-relaxation data
分子名称: DI-UBIQUITIN
著者Van Dijk, A.D.J, Fushman, D, Bonvin, A.M.J.J.
登録日2004-12-22
公開日2005-08-31
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Various Strategies of Using Residual Dipolar Couplings in NMR-Driven Protein Docking: Application to Lys48-Linked Di-Ubiquitin and Validation Against 15N-Relaxation Data
Proteins: Struct., Funct., Bioinf., 60, 2005
2JZZ
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BU of 2jzz by Molmil
Solid-State NMR Structure of Microcrystalline Ubiquitin
分子名称: Ubiquitin
著者Manolikas, T, Herrmann, T, Meier, B.H.
登録日2008-01-22
公開日2008-03-25
最終更新日2024-05-08
実験手法SOLID-STATE NMR
主引用文献Protein structure determination from 13C spin-diffusion solid-state NMR spectroscopy.
J.Am.Chem.Soc., 130, 2008
5UJL
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BU of 5ujl by Molmil
Representative 1-conformer ensembles of K27-linked Ub2 from RDC data
分子名称: Ubiquitin
著者Castaneda, C.A, Fushman, D.
登録日2017-01-18
公開日2017-10-25
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Linkage via K27 Bestows Ubiquitin Chains with Unique Properties among Polyubiquitins.
Structure, 24, 2016
5UJN
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BU of 5ujn by Molmil
Representative 2-conformer ensembles of K27-linked Ub2 from RDC data
分子名称: Ubiquitin
著者Castaneda, C.A, Fushman, D.
登録日2017-01-18
公開日2018-08-08
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Linkage via K27 Bestows Ubiquitin Chains with Unique Properties among Polyubiquitins.
Structure, 24, 2016
2MRO
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BU of 2mro by Molmil
Structure of the complex of ubiquitin and the UBA domain from DNA-damage-inducible 1 protein (Ddi1)
分子名称: DNA damage-inducible protein 1, Polyubiquitin-B
著者Zhang, D, Fushman, D.
登録日2014-07-14
公開日2015-02-04
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献DNA-Damage-Inducible 1 Protein (Ddi1) Contains an Uncharacteristic Ubiquitin-like Domain that Binds Ubiquitin.
Structure, 23, 2015
1D3Z
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BU of 1d3z by Molmil
UBIQUITIN NMR STRUCTURE
分子名称: PROTEIN (UBIQUITIN)
著者Cornilescu, G, Marquardt, J.L, Ottiger, M, Bax, A.
登録日1999-10-01
公開日1999-10-14
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Validation of Protein Structure from Anisotropic Carbonyl Chemical Shifts in a Dilute Liquid Crystalline Phase
J.Am.Chem.Soc., 120, 1998
2Z59
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BU of 2z59 by Molmil
Complex Structures of Mouse Rpn13 (22-130aa) and ubiquitin
分子名称: Protein ADRM1, Ubiquitin
著者Chen, X, Schreiner, P, Groll, M, Walters, K.J.
登録日2007-07-01
公開日2008-05-20
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Ubiquitin docking at the proteasome through a novel pleckstrin-homology domain interaction.
Nature, 453, 2008
1YX6
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BU of 1yx6 by Molmil
Solution Structure of S5a UIM-2/Ubiquitin Complex
分子名称: 26S proteasome non-ATPase regulatory subunit 4, Ubiquitin
著者Wang, Q, Young, P, Walters, K.J.
登録日2005-02-19
公開日2005-04-19
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structure of S5a Bound to Monoubiquitin Provides a Model for Polyubiquitin Recognition
J.Mol.Biol., 348, 2005
2L0F
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BU of 2l0f by Molmil
Solution NMR structure of human polymerase iota UBM2 (P692A mutant) in complex with ubiquitin
分子名称: DNA polymerase iota, Ubiquitin
著者Cui, G, Benirschke, R, Mer, G.
登録日2010-07-01
公開日2010-11-03
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structural Basis of Ubiquitin Recognition by Translesion Synthesis DNA Polymerase iota.
Biochemistry, 49, 2010
1YX5
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BU of 1yx5 by Molmil
Solution Structure of S5a UIM-1/Ubiquitin Complex
分子名称: 26S proteasome non-ATPase regulatory subunit 4, Ubiquitin
著者Wang, Q, Young, P, Walters, K.J.
登録日2005-02-19
公開日2005-04-19
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structure of S5a Bound to Monoubiquitin Provides a Model for Polyubiquitin Recognition
J.Mol.Biol., 348, 2005
5XK4
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BU of 5xk4 by Molmil
Retracted state of S65-phosphorylated ubiquitin
分子名称: Polyubiquitin-B
著者Dong, X, Gong, Z, Qin, L.Y, Ran, M.L, Zhang, C.L, Liu, K, Liu, Z, Zhang, W.P, Tang, C.
登録日2017-05-05
公開日2017-06-28
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Ubiquitin S65 phosphorylation engenders a pH-sensitive conformational switch
Proc. Natl. Acad. Sci. U.S.A., 114, 2017

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