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PDB: 33 件

7W0Q
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TRIM7 in complex with C-terminal peptide of 2C
分子名称: E3 ubiquitin-protein ligase TRIM7, peptide
著者Zhang, H, Liang, X, Li, X.Z.
登録日2021-11-18
公開日2022-08-10
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献A C-terminal glutamine recognition mechanism revealed by E3 ligase TRIM7 structures.
Nat.Chem.Biol., 18, 2022
2ZU1
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crystal structure of CVB3 3C protease mutant C147A
分子名称: 3C proteinase
著者Lee, C.C, Tsui, Y.C, Wang, A.H.-J.
登録日2008-10-12
公開日2009-01-13
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.38 Å)
主引用文献Structural Basis of Inhibition Specificities of 3C and 3C-like Proteases by Zinc-coordinating and Peptidomimetic Compounds
J.Biol.Chem., 284, 2009
7W0S
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TRIM7 in complex with C-terminal peptide of 2C
分子名称: DI(HYDROXYETHYL)ETHER, E3 ubiquitin-protein ligase TRIM7, GLYCEROL, ...
著者Zhang, H, Liang, X, Li, X.Z.
登録日2021-11-18
公開日2022-08-10
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献A C-terminal glutamine recognition mechanism revealed by E3 ligase TRIM7 structures.
Nat.Chem.Biol., 18, 2022
6S3A
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Coxsackie B3 2C protein in complex with S-Fluoxetine
分子名称: (3S)-N-methyl-3-phenyl-3-[4-(trifluoromethyl)phenoxy]propan-1-amine, 2C protein, CHLORIDE ION, ...
著者El Kazzi, P, Papageorgiou, N, Ferron, F.P, Bauer, L, van Kuppeveld, F, Coutard, B.
登録日2019-06-24
公開日2021-01-13
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.52 Å)
主引用文献Fluoxetine targets an allosteric site in the enterovirus 2C AAA+ ATPase and stabilizes a ring-shaped hexameric complex.
Sci Adv, 8, 2022
7W0T
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TRIM7 in complex with C-terminal peptide of 2C
分子名称: E3 ubiquitin-protein ligase TRIM7, peptide
著者Zhang, H, Liang, X, Li, X.Z.
登録日2021-11-18
公開日2022-08-10
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献A C-terminal glutamine recognition mechanism revealed by E3 ligase TRIM7 structures.
Nat.Chem.Biol., 18, 2022
7QUW
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CVB3-3Cpro in complex with inhibitor MG-78
分子名称: (1R,2S,5S)-N-{(2S,3R)-4-amino-3-hydroxy-4-oxo-1-[(3S)-2-oxopyrrolidin-3-yl]butan-2-yl}-3-[N-(tert-butylcarbamoyl)-3-methyl-L-valyl]-6,6-dimethyl-3-azabicyclo[3.1.0]hexane-2-carboxamide, Protease 3C
著者Zhang, L, Hilgenfeld, R.
登録日2022-01-19
公開日2022-03-09
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献From Repurposing to Redesign: Optimization of Boceprevir to Highly Potent Inhibitors of the SARS-CoV-2 Main Protease.
Molecules, 27, 2022
2ZTY
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crystal structure of 3C protease from CVB3 in space group C2
分子名称: 3C proteinase
著者Lee, C.C, Wang, A.H.-J.
登録日2008-10-10
公開日2009-01-13
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Structural Basis of Inhibition Specificities of 3C and 3C-like Proteases by Zinc-coordinating and Peptidomimetic Compounds
J.Biol.Chem., 284, 2009
2ZTX
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Complex structure of CVB3 3C protease with EPDTC
分子名称: 3C proteinase, zinc(II)hydrogensulfide
著者Lee, C.C, Wang, A.H.-J.
登録日2008-10-10
公開日2009-01-13
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Structural Basis of Inhibition Specificities of 3C and 3C-like Proteases by Zinc-coordinating and Peptidomimetic Compounds
J.Biol.Chem., 284, 2009
2ZU3
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Complex structure of CVB3 3C protease with TG-0204998
分子名称: 3C proteinase, N-[(benzyloxy)carbonyl]-3-[(2,2-dimethylpropanoyl)amino]-L-alanyl-N-[(1R)-4-oxo-1-{[(3S)-2-oxopyrrolidin-3-yl]methyl}pentyl]-L-leucinamide
著者Lee, C.C, Tsui, Y.C, Wang, A.H.-J.
登録日2008-10-12
公開日2009-01-13
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structural Basis of Inhibition Specificities of 3C and 3C-like Proteases by Zinc-coordinating and Peptidomimetic Compounds
J.Biol.Chem., 284, 2009
4WFZ
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Coxsackievirus B3 3Dpol RNA Dependent RNA Polymerase - NaCl Crystal Form
分子名称: RNA-directed RNA polymerase, SODIUM ION
著者Peersen, O.B, McDonald, S.M.
登録日2014-09-17
公開日2014-10-22
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.803 Å)
主引用文献Structure-Function Relationships Underlying the Replication Fidelity of Viral RNA-Dependent RNA Polymerases.
J.Virol., 89, 2015
4WFX
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Coxsackievirus B3 Polymerase - F232L Mutant - NaCl Crystal Form
分子名称: RNA-directed RNA polymerase, SODIUM ION
著者Peersen, O.B, McDonald, S.M.
登録日2014-09-17
公開日2014-10-22
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.808 Å)
主引用文献Structure-Function Relationships Underlying the Replication Fidelity of Viral RNA-Dependent RNA Polymerases.
J.Virol., 89, 2015
6T3W
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Coxsackie B3 2C protein in complex with S-Fluoxetine
分子名称: (3S)-N-methyl-3-phenyl-3-[4-(trifluoromethyl)phenoxy]propan-1-amine, 2C protein, SODIUM ION, ...
著者El Kazzi, P, Papageorgiou, N, Ferron, F.P, Bauer, L, van Kuppeveld, F, Coutard, B.
登録日2019-10-11
公開日2020-11-18
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Fluoxetine targets an allosteric site in the enterovirus 2C AAA+ ATPase and stabilizes a ring-shaped hexameric complex.
Sci Adv, 8, 2022
2ZTZ
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crystal structure of 3C protease from CVB3 in space group P21
分子名称: 3C proteinase
著者Lee, C.C, Wang, A.H.-J.
登録日2008-10-11
公開日2009-01-13
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural Basis of Inhibition Specificities of 3C and 3C-like Proteases by Zinc-coordinating and Peptidomimetic Compounds
J.Biol.Chem., 284, 2009
4WFY
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Coxsackievirus B3 Polymerase - F232L Mutant - AmSO4 Crystal Form
分子名称: GLYCEROL, RNA-directed RNA polymerase, SULFATE ION
著者Peersen, O.B, McDonald, S.M.
登録日2014-09-17
公開日2014-10-22
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.06 Å)
主引用文献Structure-Function Relationships Underlying the Replication Fidelity of Viral RNA-Dependent RNA Polymerases.
J.Virol., 89, 2015
3CDU
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BU of 3cdu by Molmil
Crystal structure of coxsackievirus B3 RNA-dependent RNA polymerase (3Dpol) in complex with a pyrophosphate
分子名称: ACETATE ION, CHLORIDE ION, GLYCEROL, ...
著者Gruez, A, Selisko, B, Roberts, M, Bricogne, G, Bussetta, C, Canard, B.
登録日2008-02-27
公開日2008-07-22
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The crystal structure of coxsackievirus B3 RNA-dependent RNA polymerase in complex with its protein primer VPg confirms the existence of a second VPg binding site on Picornaviridae polymerases
J.Virol., 82, 2008
7W14
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BU of 7w14 by Molmil
Coxsackievirus B3 at pH7.4 (VP3-234E) incubation with coxsackievirus and adenovirus receptor for 20min
分子名称: Capsid protein VP1, Capsid protein VP2, Capsid protein VP3, ...
著者Wang, Q.L, Liu, C.C.
登録日2021-11-19
公開日2022-01-19
最終更新日2022-08-03
実験手法ELECTRON MICROSCOPY (2.2 Å)
主引用文献Molecular basis of differential receptor usage for naturally occurring CD55-binding and -nonbinding coxsackievirus B3 strains.
Proc.Natl.Acad.Sci.USA, 119, 2022
2VB0
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BU of 2vb0 by Molmil
Crystal structure of coxsackievirus B3 proteinase 3C
分子名称: CHLORIDE ION, POLYPROTEIN 3BCD
著者Anand, K, Mesters, J.R, Goerlach, R, Zell, R, Hilgenfeld, R.
登録日2007-09-05
公開日2008-10-28
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal Structure of Coxsackie Virus B3 Proteinase 3C
To be Published
7W17
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Coxsackievirus B3 full particle at pH7.4 (VP3-234E)
分子名称: PALMITIC ACID, VP1, VP2, ...
著者Wang, Q.L, Liu, C.C.
登録日2021-11-19
公開日2022-01-19
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献Molecular basis of differential receptor usage for naturally occurring CD55-binding and -nonbinding coxsackievirus B3 strains.
Proc.Natl.Acad.Sci.USA, 119, 2022
3CDW
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BU of 3cdw by Molmil
Crystal structure of coxsackievirus B3 RNA-dependent RNA polymerase (3Dpol) in complex with protein primer VPg and a pyrophosphate
分子名称: ACETATE ION, CHLORIDE ION, GLYCEROL, ...
著者Gruez, A, Selisko, B, Roberts, M, Bricogne, G, Bussetta, C, Canard, B.
登録日2008-02-27
公開日2008-07-22
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The crystal structure of coxsackievirus B3 RNA-dependent RNA polymerase in complex with its protein primer VPg confirms the existence of a second VPg binding site on Picornaviridae polymerases
J.Virol., 82, 2008
7VY0
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Coxsackievirus B3 full particle at pH7.4 (VP3-234N)
分子名称: Capsid protein VP1, Capsid protein VP2, Capsid protein VP3, ...
著者Wang, Q.L, Liu, C.C.
登録日2021-11-13
公開日2022-01-19
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Molecular basis of differential receptor usage for naturally occurring CD55-binding and -nonbinding coxsackievirus B3 strains.
Proc.Natl.Acad.Sci.USA, 119, 2022
7VYL
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BU of 7vyl by Molmil
Coxsackievirus B3 at pH5.5 (VP3-234Q) incubation with coxsackievirus and adenovirus receptor for 20min
分子名称: Capsid protein VP1, Capsid protein VP2, Capsid protein VP3, ...
著者Wang, Q.L, Liu, C.C.
登録日2021-11-14
公開日2022-01-19
最終更新日2022-08-10
実験手法ELECTRON MICROSCOPY (2.79 Å)
主引用文献Molecular basis of differential receptor usage for naturally occurring CD55-binding and -nonbinding coxsackievirus B3 strains.
Proc.Natl.Acad.Sci.USA, 119, 2022
7VYK
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BU of 7vyk by Molmil
Coxsackievirus B3 at pH7.4 (VP3-234Q) incubation with coxsackievirus and adenovirus receptor for 10min
分子名称: Capsid protein VP1, Capsid protein VP2, Capsid protein VP3, ...
著者Wang, Q.L, Liu, C.C.
登録日2021-11-14
公開日2022-01-19
最終更新日2024-10-16
実験手法ELECTRON MICROSCOPY (2.79 Å)
主引用文献Molecular basis of differential receptor usage for naturally occurring CD55-binding and -nonbinding coxsackievirus B3 strains.
Proc.Natl.Acad.Sci.USA, 119, 2022
6ZCL
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BU of 6zcl by Molmil
Coxsackievirus B3 in complex with capsid binder compound 17
分子名称: 4-[[4-[1,3-bis(oxidanylidene)isoindol-2-yl]phenyl]sulfonylamino]benzoic acid, MYRISTIC ACID, capsid protein VP1, ...
著者Domanska, A, Flatt, J.W, Butcher, S.J.
登録日2020-06-11
公開日2021-03-17
最終更新日2023-05-31
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Identification of a conserved virion-stabilizing network inside the interprotomer pocket of enteroviruses.
Commun Biol, 4, 2021
4Y2A
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Crystal Structure of Coxsackie Virus B3 3D polymerase in complex with GPC-N114 inhibitor
分子名称: 2,2'-[(4-chlorobenzene-1,2-diyl)bis(oxy)]bis(5-nitrobenzonitrile), 3D polymerase, GLYCEROL, ...
著者Vives-Adrian, L, Ferrer-Orta, C, Verdaguer, N.
登録日2015-02-09
公開日2015-04-01
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献The RNA Template Channel of the RNA-Dependent RNA Polymerase as a Target for Development of Antiviral Therapy of Multiple Genera within a Virus Family.
Plos Pathog., 11, 2015
7VXH
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Coxsackievirus B3 full particle at pH7.4 (VP3-234Q)
分子名称: Capsid protein VP1, Capsid protein VP2, Capsid protein VP3, ...
著者Wang, Q.L, Liu, C.C.
登録日2021-11-12
公開日2022-01-19
最終更新日2024-06-26
実験手法ELECTRON MICROSCOPY (2.95 Å)
主引用文献Molecular basis of differential receptor usage for naturally occurring CD55-binding and -nonbinding coxsackievirus B3 strains.
Proc.Natl.Acad.Sci.USA, 119, 2022

 

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