Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 575 件

6SVR
DownloadVisualize
BU of 6svr by Molmil
Reference structure of bovine trypsin (odd frames of crystal x28)
分子名称: BENZAMIDINE, CALCIUM ION, Cationic trypsin, ...
著者Ahlberg Gagner, V, Lundholm, I, Garcia-Bonete, M.J, Rodilla, H, Friedman, R, Zhaunerchyk, V, Bourenkov, G, Schneider, T, Stake, J, Katona, G.
登録日2019-09-18
公開日2020-01-22
最終更新日2020-01-29
実験手法X-RAY DIFFRACTION (1.16 Å)
主引用文献Clustering of atomic displacement parameters in bovine trypsin reveals a distributed lattice of atoms with shared chemical properties.
Sci Rep, 9, 2019
6SVI
DownloadVisualize
BU of 6svi by Molmil
Non-terahertz irradiated structure of bovine trypsin (even frames of crystal x42)
分子名称: BENZAMIDINE, CALCIUM ION, Cationic trypsin, ...
著者Ahlberg Gagner, V, Lundholm, I, Garcia-Bonete, M.J, Rodilla, H, Friedman, R, Zhaunerchyk, V, Bourenkov, G, Schneider, T, Stake, J, Katona, G.
登録日2019-09-18
公開日2020-01-22
最終更新日2020-01-29
実験手法X-RAY DIFFRACTION (1.16 Å)
主引用文献Clustering of atomic displacement parameters in bovine trypsin reveals a distributed lattice of atoms with shared chemical properties.
Sci Rep, 9, 2019
6SVX
DownloadVisualize
BU of 6svx by Molmil
Reference structure of bovine trypsin (odd frames of crystal x33)
分子名称: BENZAMIDINE, CALCIUM ION, Cationic trypsin, ...
著者Ahlberg Gagner, V, Lundholm, I, Garcia-Bonete, M.J, Rodilla, H, Friedman, R, Zhaunerchyk, V, Bourenkov, G, Schneider, T, Stake, J, Katona, G.
登録日2019-09-19
公開日2020-01-22
最終更新日2020-01-29
実験手法X-RAY DIFFRACTION (1.16 Å)
主引用文献Clustering of atomic displacement parameters in bovine trypsin reveals a distributed lattice of atoms with shared chemical properties.
Sci Rep, 9, 2019
7BS5
DownloadVisualize
BU of 7bs5 by Molmil
Bovine Pancreatic Trypsin with 6-Methoxytryptamine (Cryo)
分子名称: 2-(6-methoxy-1H-indol-3-yl)ethanamine, CALCIUM ION, Cationic trypsin, ...
著者Maeki, M, Ito, S, Takeda, R, Funakubo, T, Ueno, G, Ishida, A, Tani, H, Yamamoto, M, Tokeshi, M.
登録日2020-03-30
公開日2020-08-26
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.17 Å)
主引用文献Room-temperature crystallography using a microfluidic protein crystal array device and its application to protein-ligand complex structure analysis.
Chem Sci, 11, 2020
6EAU
DownloadVisualize
BU of 6eau by Molmil
Crystallographic structure of the octapeptide derived from the BTCI inhibitor bound to beta-trypsin in space group P 21 21 21.
分子名称: CALCIUM ION, CYS-THR-LYS-SER-ILE-PRO-PRO-CYS, Cationic trypsin, ...
著者Fernandes, J.C, Valadares, N.F, Freitas, S.M, Barbosa, J.A.R.G.
登録日2018-08-03
公開日2019-08-07
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.18 Å)
主引用文献Crystallographic structure of the octapeptide derived from the BTCI inhibitor bound to beta-trypsin in space group P 21 21 21.
To Be Published
7PH1
DownloadVisualize
BU of 7ph1 by Molmil
Trypsin in complex with BPTI mutant (2S)-2-amino-4-monofluorobutanoic acid
分子名称: CALCIUM ION, Cationic trypsin, GLYCEROL, ...
著者Dimos, N, Leppkes, J, Koksch, B, Loll, B.
登録日2021-08-16
公開日2022-03-30
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.18 Å)
主引用文献Water Network in the Binding Pocket of Fluorinated BPTI-Trypsin Complexes─Insights from Simulation and Experiment.
J.Phys.Chem.B, 126, 2022
3PLB
DownloadVisualize
BU of 3plb by Molmil
Bovine trypsin variant X(tripleIle227) in complex with small molecule inhibitor
分子名称: BENZAMIDINE, CALCIUM ION, Cationic trypsin, ...
著者Tziridis, A, Neumann, P, Kolenko, P, Stubbs, M.T.
登録日2010-11-15
公開日2011-12-07
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.18 Å)
主引用文献Correlating structure and ligand affinity in drug discovery: a cautionary tale involving second shell residues.
Biol.Chem., 395, 2014
6EAX
DownloadVisualize
BU of 6eax by Molmil
Crystallographic structure of the cyclic hexapeptide derived from the BTCI inhibitor bound to beta-trypsin in space group P 21 21 21
分子名称: CALCIUM ION, CYS-THR-LYS-SER-ILE-CYS, Cationic trypsin, ...
著者Fernandes, J.C, Valadares, N.F, Freitas, S.M, Barbosa, J.A.R.G.
登録日2018-08-03
公開日2019-08-07
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.189 Å)
主引用文献Crystallographic structure of the cyclic hexapeptide derived from the BTCI inhibitor bound to beta-trypsin in space group P 21 21 21
To Be Published
6YIS
DownloadVisualize
BU of 6yis by Molmil
Trypsin inhibitor in complex with bovine trypsin
分子名称: CALCIUM ION, Cationic Trypsin, DIMETHYL SULFOXIDE, ...
著者Badran, M.J, Heine, A, Klebe, G.
登録日2020-04-01
公開日2020-12-02
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.19 Å)
主引用文献Trypsin inhibitor in complex with bovine trypsin
To Be Published
6T0P
DownloadVisualize
BU of 6t0p by Molmil
Cationic Trypsin in Complex with a D-Phe-Pro-2-aminopyridine derivative
分子名称: (2~{S})-1-[(2~{R})-2-azanyl-3-phenyl-propanoyl]-~{N}-[(2-azanylpyridin-4-yl)methyl]pyrrolidine-2-carboxamide, CALCIUM ION, Cationic Trypsin, ...
著者Ngo, K, Heine, A, Klebe, G.
登録日2019-10-03
公開日2020-05-13
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.19 Å)
主引用文献Protein-Induced Change in Ligand Protonation during Trypsin and Thrombin Binding: Hint on Differences in Selectivity Determinants of Both Proteins?
J.Med.Chem., 63, 2020
9BKF
DownloadVisualize
BU of 9bkf by Molmil
Crystal structure of selenomethionine labeled bovine trypsin mutant - S195A solved by Sulphur-SAD at 1A wavelength
分子名称: Serine protease 1
著者Zhou, D, Chen, L, Rose, J.P, Wang, B.C.
登録日2024-04-27
公開日2024-06-05
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Crystal structure of selenomethionine labeled bovine trypsin mutant - S195A solved by Sulphur-SAD at 1A wavelength
To Be Published
2BLW
DownloadVisualize
BU of 2blw by Molmil
Trypsin after a high dose X-ray "Burn"
分子名称: BENZAMIDINE, CALCIUM ION, GLYCEROL, ...
著者Nanao, M.H, Ravelli, R.B.
登録日2005-03-08
公開日2005-09-07
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Improving Radiation-Damage Substructures for Rip.
Acta Crystallogr.,Sect.D, 61, 2005
7Q0W
DownloadVisualize
BU of 7q0w by Molmil
Bovine Trypsin co-crystallized with V(IV)OSO4 and phen
分子名称: 1,10-PHENANTHROLINE, CALCIUM ION, Cationic trypsin, ...
著者Santos, M.F.A, Fernandes, A.C.P, Correia, I, Sciortino, G, Garribba, E, Santos-Silva, T, Pessoa, J.C.
登録日2021-10-16
公開日2022-05-25
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Binding of V IV O 2+ , V IV OL, V IV OL 2 and V V O 2 L Moieties to Proteins: X-ray/Theoretical Characterization and Biological Implications.
Chemistry, 28, 2022
4YTA
DownloadVisualize
BU of 4yta by Molmil
BOND LENGTH ANALYSIS OF ASP, GLU AND HIS RESIDUES IN TRYPSIN AT 1.2A RESOLUTION
分子名称: BENZAMIDINE, CALCIUM ION, Cationic trypsin, ...
著者Fisher, S.J, Helliwell, J.R, Blakeley, M.P, Cianci, M, McSweeny, S.
登録日2015-03-17
公開日2015-05-27
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Protonation-state determination in proteins using high-resolution X-ray crystallography: effects of resolution and completeness.
Acta Crystallogr. D Biol. Crystallogr., 68, 2012
2BLV
DownloadVisualize
BU of 2blv by Molmil
Trypsin before a high dose x-ray "burn"
分子名称: BENZAMIDINE, CALCIUM ION, GLYCEROL, ...
著者Nanao, M.H, Ravelli, R.B.
登録日2005-03-08
公開日2005-09-07
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Improving Radiation-Damage Substructures for Rip.
Acta Crystallogr.,Sect.D, 61, 2005
4AB9
DownloadVisualize
BU of 4ab9 by Molmil
Fragments bound to bovine trypsin for the SAMPL challenge
分子名称: 1,2-ETHANEDIOL, 1-(2,3-dihydro-1-benzofuran-5-yl)methanamine, CALCIUM ION, ...
著者Newman, J, Peat, T.S.
登録日2011-12-08
公開日2012-02-08
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献The Dingo Dataset: A Comprehensive Set of Data for the Sampl Challenge.
J.Comput.Aided Mol.Des., 26, 2012
1Y59
DownloadVisualize
BU of 1y59 by Molmil
Dianhydrosugar-based benzamidine, factor Xa specific inhibitor in complex with bovine trypsin mutant
分子名称: 2,5-BIS-O-{3-[AMINO(IMINO)METHYL]PHENYL}-1,4:3,6-DIANHYDRO-D-GLUCITOL, CALCIUM ION, GLYCEROL, ...
著者Di Fenza, A, Heine, A, Klebe, G.
登録日2004-12-02
公開日2005-12-13
最終更新日2021-11-10
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Understanding binding selectivity toward trypsin and factor Xa: the role of aromatic interactions
Chemmedchem, 2, 2007
1J8A
DownloadVisualize
BU of 1j8a by Molmil
CRYSTAL STRUCTURE OF BENZAMIDINE INHIBITED BOVINE PANCREATIC TRYPSIN AT 105K TO 1.21A RESOLUTION FROM LABORATORY SOURCE WITH HIGH NUMBER OF WATERS MODELLED
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, BENZAMIDINE, CALCIUM ION, ...
著者Cuesta-Seijo, J.A, Garcia-Granda, S.
登録日2001-05-21
公開日2001-09-12
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.21 Å)
主引用文献Trypsin as a model for high resolution X-ray diffraction in proteins.
BOL.R.SOC.HIST.NAT.SEC.GEOL., 97, 2002
7BSA
DownloadVisualize
BU of 7bsa by Molmil
Bovine Pancreatic Trypsin with 5-Chlorotryptamine (Cryo)
分子名称: 2-(5-chloranyl-1~{H}-indol-3-yl)ethanamine, CALCIUM ION, Cationic trypsin, ...
著者Maeki, M, Ito, S, Takeda, R, Funakubo, T, Ueno, G, Ishida, A, Tani, H, Yamamoto, M, Tokeshi, M.
登録日2020-03-30
公開日2020-08-26
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.22 Å)
主引用文献Room-temperature crystallography using a microfluidic protein crystal array device and its application to protein-ligand complex structure analysis.
Chem Sci, 11, 2020
4MTB
DownloadVisualize
BU of 4mtb by Molmil
Bovine trypsin in complex with small molecule inhibitor
分子名称: (2R)-2-amino-N-{(2S)-1-[(4-carbamimidoylbenzyl)amino]-1-oxopropan-2-yl}-4-(4-hydroxyphenyl)butanamide, CALCIUM ION, Cationic trypsin, ...
著者Wagner, S, Heine, A, Steinmetzer, T.
登録日2013-09-19
公開日2014-12-24
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.22 Å)
主引用文献X-ray structure of trypsin-inhibitor-complex
To be Published
4Y0Y
DownloadVisualize
BU of 4y0y by Molmil
Trypsin in complex with with BPTI
分子名称: CALCIUM ION, Cationic trypsin, GLYCEROL, ...
著者Loll, B, Ye, S, Berger, A.A, Muelow, U, Alings, C, Wahl, M.C, Koksch, B.
登録日2015-02-06
公開日2015-06-24
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Fluorine teams up with water to restore inhibitor activity to mutant BPTI.
Chem Sci, 6, 2015
4ABA
DownloadVisualize
BU of 4aba by Molmil
Fragments bound to bovine trypsin for the SAMPL challenge
分子名称: 1,2-ETHANEDIOL, 1-[2-(thiophen-2-yl)-1,3-thiazol-4-yl]methanamine, CALCIUM ION, ...
著者Newman, J, Peat, T.S.
登録日2011-12-08
公開日2012-02-08
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献The Dingo Dataset: A Comprehensive Set of Data for the Sampl Challenge.
J.Comput.Aided Mol.Des., 26, 2012
4ABD
DownloadVisualize
BU of 4abd by Molmil
Fragments bound to bovine trypsin for the SAMPL challenge
分子名称: 1,2-ETHANEDIOL, 1-[3-(1H-pyrrol-1-yl)phenyl]methanamine, CALCIUM ION, ...
著者Newman, J, Peat, T.S.
登録日2011-12-08
公開日2012-02-08
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献The Dingo Dataset: A Comprehensive Set of Data for the Sampl Challenge.
J.Comput.Aided Mol.Des., 26, 2012
6YIT
DownloadVisualize
BU of 6yit by Molmil
Trypsin inhibitor in complex with bovine trypsin
分子名称: CALCIUM ION, Cationic trypsin, DIMETHYL SULFOXIDE, ...
著者Badran, M.J, Heine, A, Klebe, G.
登録日2020-04-01
公開日2020-12-02
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Trypsin inhibitor in complex with bovine trypsin
To Be Published
4ABH
DownloadVisualize
BU of 4abh by Molmil
Fragments bound to bovine trypsin for the SAMPL challenge
分子名称: 1,2-ETHANEDIOL, 1-(3-PYRROLIDIN-1-YLPHENYL)METHANAMINE, CALCIUM ION, ...
著者Newman, J, Peat, T.S.
登録日2011-12-08
公開日2012-02-08
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献The Dingo Dataset: A Comprehensive Set of Data for the Sampl Challenge.
J.Comput.Aided Mol.Des., 26, 2012

225946

件を2024-10-09に公開中

PDB statisticsPDBj update infoContact PDBjnumon