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6GBJ
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BU of 6gbj by Molmil
Repertoires of functionally diverse enzymes through computational design at epistatic active-site positions
Descriptor: 1,2-ETHANEDIOL, FORMIC ACID, Parathion hydrolase, ...
Authors:Khersonsky, O, Lipsh, R, Avizemer, Z, Goldsmith, M, Ashani, Y, Leader, H, Dym, O, Rogotner, S, Trudeau, D, Tawfik, D.S, Fleishman, S.J.
Deposit date:2018-04-15
Release date:2018-10-24
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Automated Design of Efficient and Functionally Diverse Enzyme Repertoires.
Mol. Cell, 72, 2018
6TMM
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BU of 6tmm by Molmil
BIL2 domain from T.thermophila BUBL1 locus (C1A-N143A)
Descriptor: CALCIUM ION, DI(HYDROXYETHYL)ETHER, FORMIC ACID, ...
Authors:Chiarini, V, Ilari, A.
Deposit date:2019-12-04
Release date:2020-12-16
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (2.398 Å)
Cite:Structural basis of ubiquitination mediated by protein splicing in early Eukarya.
Biochim Biophys Acta Gen Subj, 1865, 2021
5Z5O
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BU of 5z5o by Molmil
Structure of Pycnonodysostosis disease related I249T mutant of human cathepsin K
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, CHLORIDE ION, ...
Authors:Biswas, S, Roy, S.
Deposit date:2018-01-19
Release date:2018-09-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Not all pycnodysostosis-related mutants of human cathepsin K are inactive - crystal structure and biochemical studies of an active mutant I249T.
FEBS J., 285, 2018
6GUJ
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BU of 6guj by Molmil
Molybdenum storage protein with two occupied ATP binding sites
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, MOLYBDATE ION, ...
Authors:Ermler, U, Poppe, J, Bruenle, S.
Deposit date:2018-06-19
Release date:2018-11-07
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.102 Å)
Cite:The Molybdenum Storage Protein: A soluble ATP hydrolysis-dependent molybdate pump.
FEBS J., 285, 2018
6GG1
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BU of 6gg1 by Molmil
Structure of PROSS-edited human interleukin 24
Descriptor: Interleukin-24, NICKEL (II) ION, SULFATE ION
Authors:Kolenko, P, Zahradnik, J, Kolarova, L, Schneider, B.
Deposit date:2018-05-02
Release date:2019-05-15
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Flexible regions govern promiscuous binding of IL-24 to receptors IL-20R1 and IL-22R1.
Febs J., 286, 2019
5YZV
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BU of 5yzv by Molmil
Biophysical and structural characterization of the thermostable WD40 domain of a prokaryotic protein, Thermomonospora curvata PkwA
Descriptor: Probable serine/threonine-protein kinase PkwA
Authors:Li, D.Y, Shen, C, Du, Y, Qiao, F.F, Kong, T, Yuan, L.R, Zhang, D.L, Wu, X.H, Wu, Y.D.
Deposit date:2017-12-15
Release date:2018-10-03
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Biophysical and structural characterization of the thermostable WD40 domain of a prokaryotic protein, Thermomonospora curvata PkwA
Sci Rep, 8, 2018
6GX4
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BU of 6gx4 by Molmil
The molybdenum storage protein: with ATP/Mn2+ and with POM clusters formed under in vitro conditions
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MANGANESE (II) ION, MOLYBDATE ION, ...
Authors:Poppe, J, Bruenle, S, Hail, R, Ermler, E.
Deposit date:2018-06-26
Release date:2018-12-05
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The Molybdenum Storage Protein: A soluble ATP hydrolysis-dependent molybdate pump.
FEBS J., 285, 2018
6GU5
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BU of 6gu5 by Molmil
Mosto containing the core POM clusters
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MOLYBDATE ION, Molybdenum storage protein subunit alpha, ...
Authors:Ermler, U, Poppe, J, Bruenle, S.
Deposit date:2018-06-19
Release date:2018-11-07
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The Molybdenum Storage Protein: A soluble ATP hydrolysis-dependent molybdate pump.
FEBS J., 285, 2018
6ROU
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BU of 6rou by Molmil
REP related 18-mer DNA
Descriptor: REP related 18-mer DNA from H. parasuis, STRONTIUM ION
Authors:Kolenko, P, Svoboda, J, Schneider, B.
Deposit date:2019-05-13
Release date:2020-07-08
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.902 Å)
Cite:Structural variability of CG-rich DNA 18-mers accommodating double T-T mismatches.
Acta Crystallogr D Struct Biol, 76, 2020
6S0R
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BU of 6s0r by Molmil
The crystal structure of kanamycin B dioxygenase (KanJ) from Streptomyces kanamyceticus complex with nickel, sulfate and chloride
Descriptor: CHLORIDE ION, Kanamycin B dioxygenase, NICKEL (II) ION, ...
Authors:Mrugala, B, Porebski, P.J, Niedzialkowska, E, Cymborowski, M.T, Minor, W, Borowski, T.
Deposit date:2019-06-18
Release date:2020-07-08
Last modified:2022-03-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A study on the structure, mechanism, and biochemistry of kanamycin B dioxygenase (KanJ)-an enzyme with a broad range of substrates.
Febs J., 288, 2021
6GQ4
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BU of 6gq4 by Molmil
Neisseria gonorrhoeae Adhesin Complex Protein
Descriptor: Adhesin, SODIUM ION
Authors:Orr, C.M, Tews, I.
Deposit date:2018-06-07
Release date:2018-09-19
Last modified:2018-10-24
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structure of the RecombinantNeisseria gonorrhoeaeAdhesin Complex Protein (rNg-ACP) and Generation of Murine Antibodies with Bactericidal Activity against Gonococci.
mSphere, 3, 2018
5ZT0
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BU of 5zt0 by Molmil
Crystal Structure of Protein Phosphate 1 Complexed with PP1 binding domain of GL
Descriptor: MANGANESE (II) ION, PHOSPHATE ION, Protein phosphatase 1 regulatory subunit 3B, ...
Authors:Yu, J, Xiang, S.
Deposit date:2018-05-01
Release date:2019-03-13
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.3204267 Å)
Cite:Structural basis for protein phosphatase 1 recruitment by glycogen-targeting subunits
FEBS J., 285, 2018
6THF
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BU of 6thf by Molmil
Crystal structure of two-domain Cu nitrite reductase from Bradyrhizobium sp. ORS 375
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, COPPER (II) ION, Copper-containing nitrite reductase, ...
Authors:Sasaki, D, Watanabe, T.F, Eady, R.R, Garratt, R.C, Antonyuk, S.V, Hasnain, S.S.
Deposit date:2019-11-20
Release date:2020-04-22
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Reverse protein engineering of a novel 4-domain copper nitrite reductase reveals functional regulation by protein-protein interaction.
Febs J., 288, 2021
5ZQV
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BU of 5zqv by Molmil
Crystal Structure of Protein Phosphate 1 complexed with PP1 binding domain of GM
Descriptor: CITRATE ANION, MANGANESE (II) ION, Protein phosphatase 1 regulatory subunit 3A, ...
Authors:Yu, J, Xiang, S.
Deposit date:2018-04-20
Release date:2019-03-13
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Structural basis for protein phosphatase 1 recruitment by glycogen-targeting subunits.
FEBS J., 285, 2018
6THE
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BU of 6the by Molmil
Crystal structure of core domain of four-domain heme-cupredoxin-Cu nitrite reductase from Bradyrhizobium sp. ORS 375
Descriptor: CHLORIDE ION, COPPER (II) ION, Copper-containing nitrite reductase, ...
Authors:Sasaki, D, Watanabe, T.F, Eady, R.R, Garratt, R.C, Antonyuk, S.V, Hasnain, S.S.
Deposit date:2019-11-20
Release date:2020-04-22
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.87 Å)
Cite:Reverse protein engineering of a novel 4-domain copper nitrite reductase reveals functional regulation by protein-protein interaction.
Febs J., 288, 2021
6A9U
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BU of 6a9u by Molmil
Crystal strcture of Icp55 from Saccharomyces cerevisiae bound to apstatin inhibitor
Descriptor: Intermediate cleaving peptidase 55, MANGANESE (II) ION, apstatin
Authors:Singh, R, Kumar, A, Goyal, V.D, Makde, R.D.
Deposit date:2018-07-16
Release date:2019-01-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structures and biochemical analyses of intermediate cleavage peptidase: role of dynamics in enzymatic function.
FEBS Lett., 593, 2019
6A9V
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BU of 6a9v by Molmil
Crystal structure of Icp55 from Saccharomyces cerevisiae (N-terminal 42 residues deletion)
Descriptor: GLYCINE, Intermediate cleaving peptidase 55, MANGANESE (II) ION, ...
Authors:Singh, R, Kumar, A, Goyal, V.D, Makde, R.D.
Deposit date:2018-07-16
Release date:2019-01-16
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structures and biochemical analyses of intermediate cleavage peptidase: role of dynamics in enzymatic function.
FEBS Lett., 593, 2019
6GBK
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BU of 6gbk by Molmil
Repertoires of functionally diverse enzymes through computational design at epistatic active-site positions
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, FORMIC ACID, Parathion hydrolase, ...
Authors:Khersonsky, O, Lipsh, R, Avizemer, Z, Goldsmith, M, Ashani, Y, Leader, H, Dym, O, Rogotner, S, Trudeau, D, Tawfik, D.S, Fleishman, S.J.
Deposit date:2018-04-15
Release date:2018-10-24
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Automated Design of Efficient and Functionally Diverse Enzyme Repertoires.
Mol. Cell, 72, 2018
6GBL
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BU of 6gbl by Molmil
Repertoires of functionally diverse enzymes through computational design at epistatic active-site positions
Descriptor: 1,2-ETHANEDIOL, CACODYLATE ION, FORMIC ACID, ...
Authors:Khersonsky, O, Lipsh, R, Avizemer, Z, Goldsmith, M, Ashani, Y, Leader, H, Dym, O, Rogotner, S, Trudeau, D, Tawfik, D.S, Fleishman, S.J.
Deposit date:2018-04-15
Release date:2018-10-24
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Automated Design of Efficient and Functionally Diverse Enzyme Repertoires.
Mol. Cell, 72, 2018
6GWV
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BU of 6gwv by Molmil
Molybdenum storage protein without polymolybdate clusters and ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CHLORIDE ION, Molybdenum storage protein subunit alpha, ...
Authors:Ermler, U, Poppe, J, Bruenle, S.
Deposit date:2018-06-26
Release date:2018-11-07
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The Molybdenum Storage Protein: A soluble ATP hydrolysis-dependent molybdate pump.
FEBS J., 285, 2018
6GZL
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BU of 6gzl by Molmil
Complex between the dynein light chain DYNLL1/DLC8 and a peptide from the large myelin-associated glycoprotein L-MAG
Descriptor: CHLORIDE ION, Dynein light chain 1, cytoplasmic, ...
Authors:Myllykoski, M, Kursula, P.
Deposit date:2018-07-04
Release date:2018-10-10
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.953 Å)
Cite:High-affinity heterotetramer formation between the large myelin-associated glycoprotein and the dynein light chain DYNLL1.
J. Neurochem., 147, 2018
6A9T
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BU of 6a9t by Molmil
Crystal structure of Icp55 from Saccharomyces cerevisiae (N-terminal 58 residues deletion)
Descriptor: GLYCINE, Intermediate cleaving peptidase 55, MANGANESE (II) ION, ...
Authors:Singh, R, Kumar, A, Goyal, V.D, Makde, R.D.
Deposit date:2018-07-16
Release date:2019-01-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal structures and biochemical analyses of intermediate cleavage peptidase: role of dynamics in enzymatic function.
FEBS Lett., 593, 2019
4FYD
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BU of 4fyd by Molmil
Crystal structure of yeast DNA polymerase alpha bound to DNA/RNA and dGTP
Descriptor: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, DNA (5'-D(*TP*GP*AP*GP*CP*GP*TP*G*TP*GP*TP*AP*CP*CP*CP*CP*TP*GP*CP*CP*CP*GP*CP*CP*G)-3'), DNA polymerase alpha catalytic subunit A, ...
Authors:Perera, R.L, Pellegrini, L.
Deposit date:2012-07-04
Release date:2013-02-27
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Mechanism for priming DNA synthesis by yeast DNA Polymerase alpha
eLife, 2, 2013
4FVM
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BU of 4fvm by Molmil
Crystal structure of yeast DNA polymerase alpha
Descriptor: DNA polymerase alpha catalytic subunit A
Authors:Perera, R.L, Pellegrini, L.
Deposit date:2012-06-29
Release date:2013-02-27
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Mechanism for priming DNA synthesis by yeast DNA Polymerase alpha
eLife, 2, 2013
4FXD
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BU of 4fxd by Molmil
Crystal structure of yeast DNA polymerase alpha bound to DNA/RNA
Descriptor: DNA (5'-D(*TP*TP*TP*TP*CP*GP*CP*TP*GP*CP*CP*CP*GP*CP*CP*T)-3'), DNA polymerase alpha catalytic subunit A, RNA (5'-R(*AP*GP*GP*CP*GP*GP*GP*CP*AP*G)-3')
Authors:Perera, R.L, Torella, R, Klinge, S, Kilkenny, M.L, Maman, J.D, Pellegrini, L.
Deposit date:2012-07-03
Release date:2013-02-27
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Mechanism for priming DNA synthesis by yeast DNA Polymerase alpha
eLife, 2, 2013

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