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9FO0
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BU of 9fo0 by Molmil
PF30S ribosomal subunit - control
Descriptor: 16S rRNA, Large ribosomal subunit protein eL8, RNA-binding protein, ...
Authors:Hassan, A.H, Demo, G.
Deposit date:2024-06-11
Release date:2025-01-15
Last modified:2025-01-22
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Novel archaeal ribosome dimerization factor facilitating unique 30S-30S dimerization.
Nucleic Acids Res., 53, 2025
9FSF
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BU of 9fsf by Molmil
Cryo-EM structure of Saccharolobus solfataricus 30S initiation complex bound to Ss-MAP leaderless mRNA with h44 in up position
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, LSU ribosomal protein S30E (Rps30E), Large ribosomal subunit protein eL8, ...
Authors:Bourgeois, G, Coureux, P.D, Mechulam, Y, Schmitt, E.
Deposit date:2024-06-21
Release date:2025-01-15
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Structures of Saccharolobus solfataricus initiation complexes with leaderless mRNAs highlight archaeal features and eukaryotic proximity.
Nat Commun, 16, 2025
9FY0
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BU of 9fy0 by Molmil
Cryo-EM structure of Saccharolobus solfataricus 30S initiation complex bound to Ss-aIF2beta leaderless mRNA
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, LSU ribosomal protein S26E (Rps26E), LSU ribosomal protein S30E (Rps30E), ...
Authors:Bourgeois, G, Coureux, P.D, Mechulam, Y, Schmitt, E.
Deposit date:2024-07-02
Release date:2025-01-15
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structures of Saccharolobus solfataricus initiation complexes with leaderless mRNAs highlight archaeal features and eukaryotic proximity.
Nat Commun, 16, 2025
9FNY
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BU of 9fny by Molmil
PF30S-PF30S dimer mediated by aRDF from P. furiosus (Structure I)
Descriptor: 16S rRNA, Archaeal Ribosome Dimerizing Factor (aRDF), Large ribosomal subunit protein eL8, ...
Authors:Hassan, A.H, Demo, G.
Deposit date:2024-06-11
Release date:2025-01-15
Last modified:2025-01-22
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Novel archaeal ribosome dimerization factor facilitating unique 30S-30S dimerization.
Nucleic Acids Res., 53, 2025
9FRL
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BU of 9frl by Molmil
Cryo-EM structure of Saccharolobus solfataricus 30S initiation complex bound to SD mRNA with h44 in up position
Descriptor: LSU ribosomal protein S30E (Rps30E), Large ribosomal subunit protein eL8, MAGNESIUM ION, ...
Authors:Bourgeois, G, Coureux, P.D, Mechulam, Y, Schmitt, E.
Deposit date:2024-06-19
Release date:2025-01-15
Method:ELECTRON MICROSCOPY (2.97 Å)
Cite:Structures of Saccharolobus solfataricus initiation complexes with leaderless mRNAs highlight archaeal features and eukaryotic proximity.
Nat Commun, 16, 2025
9FS6
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BU of 9fs6 by Molmil
Cryo-EM structure of Saccharolobus solfataricus 30S initiation complex bound to Ss-aIF2beta leaderless mRNA with h44 in up position
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, LSU ribosomal protein S26E (Rps26E), LSU ribosomal protein S30E (Rps30E), ...
Authors:Bourgeois, G, Coureux, P.D, Mechulam, Y, Schmitt, E.
Deposit date:2024-06-20
Release date:2025-01-15
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structures of Saccharolobus solfataricus initiation complexes with leaderless mRNAs highlight archaeal features and eukaryotic proximity.
Nat Commun, 16, 2025
9FS8
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BU of 9fs8 by Molmil
Cryo-EM structure of Saccharolobus solfataricus 30S initiation complex bound to Ss-aEF1A-like mRNA
Descriptor: LSU ribosomal protein S26E (Rps26E), LSU ribosomal protein S30E (Rps30E), Large ribosomal subunit protein eL8, ...
Authors:Bourgeois, G, Coureux, P.D, Mechulam, Y, Schmitt, E.
Deposit date:2024-06-20
Release date:2025-01-15
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structures of Saccharolobus solfataricus initiation complexes with leaderless mRNAs highlight archaeal features and eukaryotic proximity.
Nat Commun, 16, 2025
9FNZ
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BU of 9fnz by Molmil
PF30S-PF30S dimer mediated by aRDF from P. furiosus (Structure II)
Descriptor: 16S rRNA, Archaeal Ribosome Dimerizing Factor (aRDF), Large ribosomal subunit protein eL8, ...
Authors:Hassan, A.H, Demo, G.
Deposit date:2024-06-11
Release date:2025-01-15
Last modified:2025-01-22
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Novel archaeal ribosome dimerization factor facilitating unique 30S-30S dimerization.
Nucleic Acids Res., 53, 2025
1GP1
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BU of 1gp1 by Molmil
THE REFINED STRUCTURE OF THE SELENOENZYME GLUTATHIONE PEROXIDASE AT 0.2-NM RESOLUTION
Descriptor: GLUTATHIONE PEROXIDASE
Authors:Epp, O, Ladenstein, R.
Deposit date:1985-06-11
Release date:1985-11-08
Last modified:2023-07-26
Method:X-RAY DIFFRACTION (2 Å)
Cite:The refined structure of the selenoenzyme glutathione peroxidase at 0.2-nm resolution.
Eur.J.Biochem., 133, 1983
1HMY
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BU of 1hmy by Molmil
CRYSTAL STRUCTURE OF THE HHAI DNA METHYLTRANSFERASE COMPLEXED WITH S-ADENOSYL-L-METHIONINE
Descriptor: HaeIII METHYLTRANSFERASE, S-ADENOSYLMETHIONINE
Authors:Cheng, X.
Deposit date:1993-08-05
Release date:1993-10-31
Last modified:2024-12-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of the HhaI DNA methyltransferase complexed with S-adenosyl-L-methionine.
Cell(Cambridge,Mass.), 74, 1993
1JS4
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BU of 1js4 by Molmil
ENDO/EXOCELLULASE:CELLOBIOSE FROM THERMOMONOSPORA
Descriptor: CALCIUM ION, ENDO/EXOCELLULASE E4, beta-D-glucopyranose, ...
Authors:Sakon, J, Wilson, D.B, Karplus, P.A.
Deposit date:1997-05-30
Release date:1997-09-17
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure and mechanism of endo/exocellulase E4 from Thermomonospora fusca.
Nat.Struct.Biol., 4, 1997
3L0P
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BU of 3l0p by Molmil
Crystal structures of Iron containing Adenylate kinase from Desulfovibrio gigas
Descriptor: Adenylate kinase, FE (III) ION, GLYCEROL
Authors:Mukhopadhyay, A, Trincao, J, Romao, M.J.
Deposit date:2009-12-10
Release date:2010-12-15
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of the zinc-, cobalt-, and iron-containing adenylate kinase from Desulfovibrio gigas: a novel metal-containing adenylate kinase from Gram-negative bacteria
J.Biol.Inorg.Chem., 16, 2011
3KGV
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BU of 3kgv by Molmil
Crystal Structure of Human DNA-dependent Protein Kinase Catalytic Subunit (DNA-PKcs)
Descriptor: DNA-dependent Protein Kinase Catalytic Subunit
Authors:Sibanda, B.L, Chirgadze, D.Y, Blundell, T.L.
Deposit date:2009-10-29
Release date:2009-12-22
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (6.6 Å)
Cite:Crystal structure of DNA-PKcs reveals a large open-ring cradle comprised of HEAT repeats.
Nature, 463, 2010
3L0S
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BU of 3l0s by Molmil
Crystal structures of Zinc, Cobalt and Iron containing Adenylate kinase from Gram-negative bacteria Desulfovibrio gigas
Descriptor: Adenylate kinase, COBALT (II) ION, D(-)-TARTARIC ACID
Authors:Mukhopadhyay, A, Trincao, J, Romao, M.J.
Deposit date:2009-12-10
Release date:2010-12-15
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the zinc-, cobalt-, and iron-containing adenylate kinase from Desulfovibrio gigas: a novel metal-containing adenylate kinase from Gram-negative bacteria
J.Biol.Inorg.Chem., 16, 2011
3LX6
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BU of 3lx6 by Molmil
Crystal structure of putative dna cytosine methylase from shigella flexneri 2a str. 2457T
Descriptor: Cytosine-specific methyltransferase
Authors:Ramagopal, U.A, Toro, R, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2010-02-24
Release date:2010-03-23
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Crystal structure of putative dna cytosine methylase from shigella flexneri 2a str. 2457T
To be Published
3ME5
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BU of 3me5 by Molmil
Crystal structure of putative dna cytosine methylase from shigella flexneri 2a str. 2457T
Descriptor: Cytosine-specific methyltransferase
Authors:Ramagopal, U.A, Malashkevich, V.N, Toro, R, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2010-03-31
Release date:2010-04-21
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structure of putative dna cytosine methylase from shigella flexneri 2a str. 2457T
To be Published
3M9S
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BU of 3m9s by Molmil
Crystal structure of respiratory complex I from Thermus thermophilus
Descriptor: FE2/S2 (INORGANIC) CLUSTER, FLAVIN MONONUCLEOTIDE, IRON/SULFUR CLUSTER, ...
Authors:Efremov, R.G, Baradaran, R, Sazanov, L.A.
Deposit date:2010-03-22
Release date:2010-05-26
Last modified:2024-11-27
Method:X-RAY DIFFRACTION (4.5 Å)
Cite:The architecture of respiratory complex I
Nature, 465, 2010
8UTI
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BU of 8uti by Molmil
Eukaryotic 80S ribosome with Reh1 and A/P site tRNA
Descriptor: 18S rRNA, 25S rRNA, 4-{(2R)-2-[(1S,3S,5S)-3,5-dimethyl-2-oxocyclohexyl]-2-hydroxyethyl}piperidine-2,6-dione, ...
Authors:Yelland, J.N, Taylor, D.W, Johnson, A.W.
Deposit date:2023-10-31
Release date:2024-11-06
Last modified:2025-02-19
Method:ELECTRON MICROSCOPY (3.13 Å)
Cite:The assembly factor Reh1 is released from the ribosome during its initial round of translation.
Nat Commun, 16, 2025
8UT0
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BU of 8ut0 by Molmil
Eukaryotic 80S ribosome with Reh1, eIF5A and A/P site tRNA
Descriptor: 18S rRNA, 25S rRNA, 4-{(2R)-2-[(1S,3S,5S)-3,5-dimethyl-2-oxocyclohexyl]-2-hydroxyethyl}piperidine-2,6-dione, ...
Authors:Yelland, J.N, Taylor, D.W, Johnson, A.W.
Deposit date:2023-10-30
Release date:2024-11-06
Last modified:2025-02-19
Method:ELECTRON MICROSCOPY (3.22 Å)
Cite:The assembly factor Reh1 is released from the ribosome during its initial round of translation.
Nat Commun, 16, 2025
8VFT
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BU of 8vft by Molmil
Translating 80S rabbit ribosome stalled by emetine with eEF2
Descriptor: 18S rRNA, 28S rRNA, 5.8S rRNA, ...
Authors:Murray, J, Shao, S.
Deposit date:2023-12-22
Release date:2024-12-25
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structure of emetine-stalled ribosome
To Be Published
4X8L
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BU of 4x8l by Molmil
Crystal structure of E. coli Adenylate kinase P177A mutant in complex with inhibitor Ap5a
Descriptor: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, MAGNESIUM ION, ...
Authors:Sauer-Eriksson, A.E, Kovermann, M, Aden, J, Grundstrom, C, Wolf-Watz, M, Sauer, U.H.
Deposit date:2014-12-10
Release date:2015-07-22
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural basis for catalytically restrictive dynamics of a high-energy enzyme state.
Nat Commun, 6, 2015
8UIY
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BU of 8uiy by Molmil
In situ human P-Z state 80S ribosome
Descriptor: 18S rRNA, 28S rRNA, 40S ribosomal protein S10, ...
Authors:Wei, Z, Yong, X.
Deposit date:2023-10-10
Release date:2025-04-09
Method:ELECTRON MICROSCOPY (3.44 Å)
Cite:In situ human P-Z state 80S ribosome
To Be Published
8UIK
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BU of 8uik by Molmil
In situ HHT and CHX treated human 80S ribosome with EBP1 (consensus map)
Descriptor: (3beta)-O~3~-[(2R)-2,6-dihydroxy-2-(2-methoxy-2-oxoethyl)-6-methylheptanoyl]cephalotaxine, 18S rRNA, 28S rRNA, ...
Authors:Wei, Z, Yong, X.
Deposit date:2023-10-10
Release date:2025-04-30
Method:ELECTRON MICROSCOPY (2.96 Å)
Cite:In situ HHT and CHX treated human 80S ribosome with EBP1 (consensus map)
To Be Published
8UJB
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BU of 8ujb by Molmil
In situ human 80S ribosome with EBP1 (consensus map)
Descriptor: 18S rRNA, 28S rRNA, 40S ribosomal protein S10, ...
Authors:Wei, Z, Yong, X.
Deposit date:2023-10-11
Release date:2025-04-30
Method:ELECTRON MICROSCOPY (2.67 Å)
Cite:In situ human 80S ribosome with EBP1 (Consensus map)
To Be Published
8UJJ
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BU of 8ujj by Molmil
In situ HHT and CHX treated A-P state 80S ribosome
Descriptor: (3beta)-O~3~-[(2R)-2,6-dihydroxy-2-(2-methoxy-2-oxoethyl)-6-methylheptanoyl]cephalotaxine, 18S rRNA, 28S rRNA, ...
Authors:Wei, Z, Yong, X.
Deposit date:2023-10-11
Release date:2025-04-16
Method:ELECTRON MICROSCOPY (3.56 Å)
Cite:In situ HHT and CHX treated human A-P state 80S ribosome
To Be Published

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PDB entries from 2025-07-23

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