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7TJK
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BU of 7tjk by Molmil
S. cerevisiae ORC bound to 84 bp ARS1 DNA and Cdc6 (state 2) with docked Orc6 N-terminal domain
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Cell division control protein 6, DNA, ...
Authors:Schmidt, J.M, Yang, R, Kumar, A, Hunker, O, Bleichert, F.
Deposit date:2022-01-16
Release date:2022-10-05
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:A mechanism of origin licensing control through autoinhibition of S. cerevisiae ORC·DNA·Cdc6.
Nat Commun, 13, 2022
7TJJ
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BU of 7tjj by Molmil
S. cerevisiae ORC bound to 84 bp ARS1 DNA and Cdc6 (state 1) with docked Orc6 N-terminal domain
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Cell division control protein 6, DNA, ...
Authors:Schmidt, J.M, Yang, R, Kumar, A, Hunker, O, Bleichert, F.
Deposit date:2022-01-16
Release date:2022-10-05
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:A mechanism of origin licensing control through autoinhibition of S. cerevisiae ORC·DNA·Cdc6.
Nat Commun, 13, 2022
7TJH
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BU of 7tjh by Molmil
S. cerevisiae ORC bound to 84 bp ARS1 DNA and Cdc6 (state 1) with flexible Orc6 N-terminal domain
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Cell division control protein 6, DNA, ...
Authors:Schmidt, J.M, Yang, R, Kumar, A, Hunker, O, Bleichert, F.
Deposit date:2022-01-16
Release date:2022-10-05
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:A mechanism of origin licensing control through autoinhibition of S. cerevisiae ORC·DNA·Cdc6.
Nat Commun, 13, 2022
7TJI
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BU of 7tji by Molmil
S. cerevisiae ORC bound to 84 bp ARS1 DNA and Cdc6 (state 2) with flexible Orc6 N-terminal domain
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Cell division control protein 6, DNA, ...
Authors:Schmidt, J.M, Yang, R, Kumar, A, Hunker, O, Bleichert, F.
Deposit date:2022-01-16
Release date:2022-10-05
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:A mechanism of origin licensing control through autoinhibition of S. cerevisiae ORC·DNA·Cdc6.
Nat Commun, 13, 2022
7Z11
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BU of 7z11 by Molmil
Structure of substrate bound DRG1 (AFG2)
Descriptor: ATPase family gene 2 protein, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, peptide substrate
Authors:Prattes, M, Grishkovskaya, I, Bergler, H, Haselbach, D.
Deposit date:2022-02-24
Release date:2022-09-21
Last modified:2022-10-05
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Visualizing maturation factor extraction from the nascent ribosome by the AAA-ATPase Drg1.
Nat.Struct.Mol.Biol., 29, 2022
7Z34
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BU of 7z34 by Molmil
Structure of pre-60S particle bound to DRG1(AFG2).
Descriptor: 35S pre-ribosomal RNA, 5.8S rRNA, 5S rRNA, ...
Authors:Prattes, M, Grishkovskaya, I, Bergler, H, Haselbach, D.
Deposit date:2022-03-01
Release date:2022-09-21
Last modified:2023-07-19
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Visualizing maturation factor extraction from the nascent ribosome by the AAA-ATPase Drg1.
Nat.Struct.Mol.Biol., 29, 2022
8AMZ
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BU of 8amz by Molmil
Spinach 19S proteasome
Descriptor: 26S proteasome non-ATPase regulatory subunit 1 homolog, 26S proteasome non-ATPase regulatory subunit 2 homolog, 26S proteasome regulatory subunit 7, ...
Authors:Kandolf, S, Grishkovskaya, I, Meinhart, A, Haselbach, D.
Deposit date:2022-08-04
Release date:2022-08-24
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Cryo-EM structure of the plant 26S proteasome
Plant Communications, 3, 2022
8DQX
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BU of 8dqx by Molmil
Open state of RFC:PCNA bound to a 3' ss/dsDNA junction
Descriptor: DNA (5'-D(*TP*TP*TP*TP*TP*T)-3'), DNA (5'-D(P*TP*CP*CP*GP*AP*GP*CP*GP*AP*A)-3'), DNA (5'-D(P*TP*TP*TP*GP*CP*CP*CP*GP*GP*A)-3'), ...
Authors:Schrecker, M, Hite, R.K.
Deposit date:2022-07-20
Release date:2022-08-24
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (2.1 Å)
Cite:Multistep loading of a DNA sliding clamp onto DNA by replication factor C.
Elife, 11, 2022
8DR0
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BU of 8dr0 by Molmil
Closed state of RFC:PCNA bound to a 3' ss/dsDNA junction
Descriptor: DNA (5'-D(P*CP*CP*CP*CP*GP*GP*GP*GP*CP*CP*CP*CP*CP*CP*CP*GP*GP*C)-3'), DNA (5'-D(P*TP*TP*TP*TP*TP*TP*CP*GP*GP*GP*GP*GP*GP*GP*CP*CP*CP*CP*GP*GP*GP*G)-3'), GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Schrecker, M, Hite, R.K.
Deposit date:2022-07-20
Release date:2022-08-24
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (2.42 Å)
Cite:Multistep loading of a DNA sliding clamp onto DNA by replication factor C.
Elife, 11, 2022
8DQZ
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BU of 8dqz by Molmil
Intermediate state of RFC:PCNA bound to a 3' ss/dsDNA junction
Descriptor: DNA (5'-D(P*CP*CP*CP*CP*GP*GP*GP*GP*CP*CP*CP*CP*CP*CP*CP*GP*GP*C)-3'), DNA (5'-D(P*TP*TP*TP*TP*TP*TP*CP*GP*GP*GP*GP*GP*GP*GP*CP*CP*CP*CP*GP*GP*GP*G)-3'), GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Schrecker, M, Hite, R.K.
Deposit date:2022-07-20
Release date:2022-08-24
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (2.92 Å)
Cite:Multistep loading of a DNA sliding clamp onto DNA by replication factor C.
Elife, 11, 2022
8DR6
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BU of 8dr6 by Molmil
Closed state of RFC:PCNA bound to a nicked dsDNA
Descriptor: ADENOSINE-5'-DIPHOSPHATE, DNA (32-MER), DNA (5'-D(P*CP*CP*CP*CP*CP*CP*GP*GP*CP*CP*CP*CP*CP*CP*CP*GP*GP*C)-3'), ...
Authors:Schrecker, M, Hite, R.K.
Deposit date:2022-07-20
Release date:2022-08-24
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (2.39 Å)
Cite:Multistep loading of a DNA sliding clamp onto DNA by replication factor C.
Elife, 11, 2022
8DR3
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BU of 8dr3 by Molmil
Closed state of RFC:PCNA bound to a 3' ss/dsDNA junction (DNA2) with NTD
Descriptor: DNA (5'-D(P*CP*CP*CP*CP*CP*CP*CP*CP*CP*CP*TP*TP*T)-3'), DNA (5'-D(P*CP*CP*CP*CP*CP*CP*GP*GP*CP*CP*CP*CP*CP*CP*CP*GP*GP*C)-3'), DNA (5'-D(P*TP*TP*AP*GP*GP*GP*GP*GP*GP*GP*GP*GP*A)-3'), ...
Authors:Schrecker, M, Hite, R.K.
Deposit date:2022-07-20
Release date:2022-08-17
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (2.2 Å)
Cite:Multistep loading of a DNA sliding clamp onto DNA by replication factor C.
Elife, 11, 2022
8DR7
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BU of 8dr7 by Molmil
Open state of RFC:PCNA bound to a nicked dsDNA
Descriptor: DNA (26-MER), DNA (5'-D(P*AP*GP*GP*GP*GP*GP*GP*GP*GP*GP*G)-3'), DNA (5'-D(P*GP*GP*CP*CP*CP*CP*CP*CP*CP*GP*GP*C)-3'), ...
Authors:Schrecker, M, Hite, R.K.
Deposit date:2022-07-20
Release date:2022-08-17
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Multistep loading of a DNA sliding clamp onto DNA by replication factor C.
Elife, 11, 2022
8DR4
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BU of 8dr4 by Molmil
Open state of RFC:PCNA bound to a 3' ss/dsDNA junction (DNA2) without NTD
Descriptor: DNA (5'-D(P*AP*AP*GP*GP*GP*GP*GP*GP*GP*GP*GP*G)-3'), DNA (5'-D(P*CP*CP*CP*CP*CP*CP*CP*CP*CP*CP*TP*TP*T)-3'), DNA (5'-D(P*CP*CP*CP*CP*CP*CP*GP*GP*CP*CP*CP*CP*CP*CP*CP*GP*GP*C)-3'), ...
Authors:Schrecker, M, Hite, R.K.
Deposit date:2022-07-20
Release date:2022-08-17
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (2.45 Å)
Cite:Multistep loading of a DNA sliding clamp onto DNA by replication factor C.
Elife, 11, 2022
8DR5
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BU of 8dr5 by Molmil
Open state of RFC:PCNA bound to a 3' ss/dsDNA junction (DNA2) with NTD
Descriptor: DNA (5'-D(P*AP*GP*GP*GP*GP*GP*GP*GP*GP*GP*G)-3'), DNA (5'-D(P*CP*CP*CP*CP*CP*CP*CP*CP*CP*CP*TP*TP*T)-3'), DNA (5'-D(P*GP*GP*CP*CP*CP*CP*CP*CP*CP*GP*GP*C)-3'), ...
Authors:Schrecker, M, Hite, R.K.
Deposit date:2022-07-20
Release date:2022-08-17
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (2.76 Å)
Cite:Multistep loading of a DNA sliding clamp onto DNA by replication factor C.
Elife, 11, 2022
8DQW
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BU of 8dqw by Molmil
Open state of Rad24-RFC:9-1-1 bound to a 5' ss/dsDNA junction
Descriptor: DDC1 isoform 1, DNA (5'-D(P*CP*GP*TP*CP*CP*CP*TP*TP*CP*C)-3'), DNA (50-MER), ...
Authors:Schrecker, M, Hite, R.K.
Deposit date:2022-07-20
Release date:2022-08-17
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (2.1 Å)
Cite:Multistep loading of a DNA sliding clamp onto DNA by replication factor C.
Elife, 11, 2022
8DR1
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BU of 8dr1 by Molmil
Consensus closed state of RFC:PCNA bound to a 3' ss/dsDNA junction (DNA2)
Descriptor: DNA (5'-D(P*CP*CP*CP*CP*CP*CP*CP*CP*CP*CP*TP*TP*T)-3'), DNA (5'-D(P*CP*CP*CP*CP*CP*CP*GP*GP*CP*CP*CP*CP*CP*CP*CP*GP*GP*C)-3'), DNA (5'-D(P*TP*TP*AP*GP*GP*GP*GP*GP*GP*GP*GP*GP*A)-3'), ...
Authors:Schrecker, M, Hite, R.K.
Deposit date:2022-07-20
Release date:2022-08-17
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (2.14 Å)
Cite:Multistep loading of a DNA sliding clamp onto DNA by replication factor C.
Elife, 11, 2022
7OAT
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BU of 7oat by Molmil
Structural basis for targeted p97 remodelling by ASPL as prerequisite for p97 trimethylation by METTL21D
Descriptor: 1,2-ETHANEDIOL, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Petrovic, S, Heinemann, U, Roske, Y.
Deposit date:2021-04-20
Release date:2022-08-03
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.995 Å)
Cite:Structural remodeling of AAA+ ATPase p97 by adaptor protein ASPL facilitates posttranslational methylation by METTL21D.
Proc.Natl.Acad.Sci.USA, 120, 2023
8D6X
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BU of 8d6x by Molmil
Structure of the Mycobacterium tuberculosis 20S proteasome bound to the ATP-bound Mpa ATPase
Descriptor: AAA ATPase forming ring-shaped complexes, Proteasome subunit alpha, Proteasome subunit beta, ...
Authors:Xiao, X, Li, H.
Deposit date:2022-06-06
Release date:2022-08-03
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:The beta-Grasp Domain of Proteasomal ATPase Mpa Makes Critical Contacts with the Mycobacterium tuberculosis 20S Core Particle to Facilitate Degradation.
Msphere, 7, 2022
8D6Y
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BU of 8d6y by Molmil
Structure of the Mycobacterium tuberculosis 20S proteasome bound to the ADP-bound Mpa ATPase
Descriptor: AAA ATPase forming ring-shaped complexes, Proteasome subunit alpha, Proteasome subunit beta, ...
Authors:Xiao, X, Li, H.
Deposit date:2022-06-06
Release date:2022-08-03
Last modified:2023-08-16
Method:ELECTRON MICROSCOPY (10 Å)
Cite:The beta-Grasp Domain of Proteasomal ATPase Mpa Makes Critical Contacts with the Mycobacterium tuberculosis 20S Core Particle to Facilitate Degradation.
Msphere, 7, 2022
7SUK
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BU of 7suk by Molmil
Structure of Bfr2-Lcp5 Complex Observed in the Small Subunit Processome Isolated from R2TP-depleted Yeast Cells
Descriptor: 18S pre-rRNA, 40S ribosomal protein S11-A, 40S ribosomal protein S13, ...
Authors:Rai, J, Zhao, Y, Li, H.
Deposit date:2021-11-17
Release date:2022-07-06
Last modified:2023-08-16
Method:ELECTRON MICROSCOPY (3.99 Å)
Cite:Artificial intelligence-assisted cryoEM structure of Bfr2-Lcp5 complex observed in the yeast small subunit processome.
Commun Biol, 5, 2022
7U1A
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BU of 7u1a by Molmil
RFC:PCNA bound to dsDNA with a ssDNA gap of six nucleotides
Descriptor: ADENOSINE-5'-DIPHOSPHATE, DNA - Primer, DNA - Template, ...
Authors:Liu, X, Gaubitz, C, Pajak, J, Kelch, B.A.
Deposit date:2022-02-20
Release date:2022-07-06
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:A second DNA binding site on RFC facilitates clamp loading at gapped or nicked DNA.
Elife, 11, 2022
7U1P
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BU of 7u1p by Molmil
RFC:PCNA bound to DNA with a ssDNA gap of five nucleotides
Descriptor: ADENOSINE-5'-DIPHOSPHATE, DNA - Primer, DNA - Template, ...
Authors:Liu, X, Gaubitz, C, Pajak, J, Kelch, B.A.
Deposit date:2022-02-21
Release date:2022-07-06
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (3 Å)
Cite:A second DNA binding site on RFC facilitates clamp loading at gapped or nicked DNA.
Elife, 11, 2022
7U19
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BU of 7u19 by Molmil
RFC:PCNA bound to nicked DNA
Descriptor: ADENOSINE-5'-DIPHOSPHATE, DNA, MAGNESIUM ION, ...
Authors:Liu, X, Gaubitz, C, Pajak, J, Kelch, B.A.
Deposit date:2022-02-20
Release date:2022-07-06
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:A second DNA binding site on RFC facilitates clamp loading at gapped or nicked DNA.
Elife, 11, 2022
7UPR
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BU of 7upr by Molmil
Human mitochondrial AAA protein ATAD1 (with a catalytic dead mutation) in complex with a peptide substrate (closed conformation)
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Outer mitochondrial transmembrane helix translocase, ...
Authors:Wang, L, Toutkoushian, H, Belyy, V, Kokontis, C, Walter, P.
Deposit date:2022-04-16
Release date:2022-06-15
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Conserved structural elements specialize ATAD1 as a membrane protein extraction machine.
Elife, 11, 2022

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PDB entries from 2024-06-12

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