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2MQH
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BU of 2mqh by Molmil
Solution structure of the Chlamydomonas reinhardtii NAB1 cold shock domain, CSD1
Descriptor: Nucleic acid binding protein
Authors:Sawyer, A, Mobli, M.
Deposit date:2014-06-20
Release date:2015-05-06
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution structure of the RNA-binding cold-shock domain of the Chlamydomonas reinhardtii NAB1 protein and insights into RNA recognition.
Biochem.J., 469, 2015
6CAQ
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BU of 6caq by Molmil
Crystal Structure of 30S ribosomal subunit from Thermus thermophilus
Descriptor: 16S Ribosomal RNA rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
Authors:DeMirci, H.
Deposit date:2018-01-31
Release date:2018-07-25
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Crystal Structure of 30S ribosomal subunit from Thermus thermophilus
To Be Published
8K0S
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BU of 8k0s by Molmil
The Anoxybacillus pushchinoensis ORF-less Group IIC Intron HYER1 with 10-nt TRS at symmetric apo state
Descriptor: MAGNESIUM ION, RNA (543-MER)
Authors:Zhu, H.Z, Liu, J.J.G.
Deposit date:2023-07-10
Release date:2024-05-01
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.41 Å)
Cite:Hydrolytic endonucleolytic ribozyme (HYER) is programmable for sequence-specific DNA cleavage.
Science, 383, 2024
5D6S
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BU of 5d6s by Molmil
Structure of epoxyqueuosine reductase from Streptococcus thermophilus.
Descriptor: COBALAMIN, Epoxyqueuosine reductase, IRON/SULFUR CLUSTER
Authors:Payne, K.A.P, Fisher, K, Dunstan, M.S, Sjuts, H, Leys, D.
Deposit date:2015-08-12
Release date:2015-09-23
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Epoxyqueuosine Reductase Structure Suggests a Mechanism for Cobalamin-dependent tRNA Modification.
J.Biol.Chem., 290, 2015
5ZKI
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BU of 5zki by Molmil
Human EXOG-H140A in complex with duplex DNA
Descriptor: CHLORIDE ION, DNA (5'-D(*CP*GP*GP*GP*AP*TP*AP*TP*CP*CP*CP*G)-3'), MAGNESIUM ION, ...
Authors:Wu, C.C, Lin, J.L.J, Yuan, H.S.
Deposit date:2018-03-24
Release date:2019-04-03
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.321 Å)
Cite:A unique exonuclease ExoG cleaves between RNA and DNA in mitochondrial DNA replication.
Nucleic Acids Res., 47, 2019
8K0P
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BU of 8k0p by Molmil
The Anoxybacillus pushchinoensis ORF-less Group IIC Intron HYER1 at symmetric apo state
Descriptor: MAGNESIUM ION, RNA (542-MER)
Authors:Zhu, H.Z, Liu, J.J.G.
Deposit date:2023-07-10
Release date:2024-05-15
Method:ELECTRON MICROSCOPY (2.99 Å)
Cite:Hydrolytic endonucleolytic ribozyme (HYER) is programmable for sequence-specific DNA cleavage.
Science, 383, 2024
8K15
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BU of 8k15 by Molmil
The Streptococcus azizii ORF-less Group IIC intron HYER2 at apo state
Descriptor: MAGNESIUM ION, RNA (470-MER)
Authors:Zhu, H.Z, Liu, J.J.G.
Deposit date:2023-07-10
Release date:2024-05-15
Method:ELECTRON MICROSCOPY (2.58 Å)
Cite:Hydrolytic endonucleolytic ribozyme (HYER) is programmable for sequence-specific DNA cleavage.
Science, 383, 2024
8K0Q
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BU of 8k0q by Molmil
The Anoxybacillus pushchinoensis ORF-less Group IIC Intron HYER1 at symmetric pre-cleavage state
Descriptor: DNA, MAGNESIUM ION, RNA (542-MER)
Authors:Zhu, H.Z, Liu, J.J.G.
Deposit date:2023-07-10
Release date:2024-05-15
Method:ELECTRON MICROSCOPY (3.14 Å)
Cite:Hydrolytic endonucleolytic ribozyme (HYER) is programmable for sequence-specific DNA cleavage.
Science, 383, 2024
6AR3
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BU of 6ar3 by Molmil
Structure of a Thermostable Group II Intron Reverse Transcriptase with Template-Primer and Its Functional and Evolutionary Implications (RT/Duplex (Se-Met))
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, DNA, GsI-IIC RT, ...
Authors:Stamos, J.L, Lentzsch, A.M, Lambowitz, A.M.
Deposit date:2017-08-21
Release date:2017-11-29
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (3.41 Å)
Cite:Structure of a Thermostable Group II Intron Reverse Transcriptase with Template-Primer and Its Functional and Evolutionary Implications.
Mol. Cell, 68, 2017
4LTT
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BU of 4ltt by Molmil
Crystal structure of native apo toxin from Helicobacter pylori
Descriptor: Uncharacterized protein, toxin
Authors:Lee, B.J, Im, H, Pathak, C.C, Yoon, H.J.
Deposit date:2013-07-23
Release date:2014-02-05
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.28 Å)
Cite:Crystal structure of apo and copper bound HP0894 toxin from Helicobacter pylori 26695 and insight into mRNase activity
Biochim.Biophys.Acta, 1834, 2013
3LQX
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BU of 3lqx by Molmil
SRP ribonucleoprotein core complexed with cobalt hexammine
Descriptor: CHLORIDE ION, COBALT HEXAMMINE(III), POTASSIUM ION, ...
Authors:Batey, R.T.
Deposit date:2010-02-10
Release date:2010-03-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Structural and Energetic Analysis of Metal Ions Essential to SRP Signal Recognition Domain Assembly
Biochemistry, 41, 2002
4KAI
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BU of 4kai by Molmil
HCV NS5B GT1B N316 with GSK5852A
Descriptor: HCV Polymerase, [4-({[5-cyclopropyl-2-(4-fluorophenyl)-3-(methylcarbamoyl)-1-benzofuran-6-yl](methylsulfonyl)amino}methyl)-2-fluorophenyl]boronic acid
Authors:Williams, S.P, Kahler, K.M, Shotwell, J.B.
Deposit date:2013-04-22
Release date:2013-05-08
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Discovery of a Potent Boronic Acid Derived Inhibitor of the HCV RNA-Dependent RNA Polymerase.
J.Med.Chem., 57, 2014
6AR1
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BU of 6ar1 by Molmil
Structure of a Thermostable Group II Intron Reverse Transcriptase with Template-Primer and Its Functional and Evolutionary Implications (RT/Duplex (Nat))
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, DNA, GsI-IIC RT, ...
Authors:Stamos, J.L, Lentzsch, A.M, Lambowitz, A.M.
Deposit date:2017-08-21
Release date:2017-11-29
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.01 Å)
Cite:Structure of a Thermostable Group II Intron Reverse Transcriptase with Template-Primer and Its Functional and Evolutionary Implications.
Mol. Cell, 68, 2017
5AN4
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BU of 5an4 by Molmil
Crystal structure of the human 8-oxoguanine glycosylase (OGG1) processed with the CrystalDirect automated mounting and cryo-cooling technology
Descriptor: N-GLYCOSYLASE/DNA LYASE, SULFATE ION
Authors:Zander, U, Ytre-Arne, M, Dalhus, B, Hoffmann, G, Cornaciu, I, Cipriani, F, Marquez, J.A.
Deposit date:2015-09-04
Release date:2016-04-13
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Automated Harvesting and Processing of Protein Crystals Through Laser Photoablation.
Acta Crystallogr.,Sect.D, 72, 2016
3CM8
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BU of 3cm8 by Molmil
A RNA polymerase subunit structure from virus
Descriptor: Polymerase acidic protein, peptide from RNA-directed RNA polymerase catalytic subunit
Authors:He, X, Zhou, J, Zeng, Z, Ma, J, Zhang, R, Rao, Z, Liu, Y.
Deposit date:2008-03-21
Release date:2008-07-15
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.899 Å)
Cite:Crystal structure of the polymerase PAC-PB1N complex from an avian influenza H5N1 virus
Nature, 454, 2008
3H7I
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BU of 3h7i by Molmil
Structure of the metal-free D132N T4 RNase H
Descriptor: Ribonuclease H, SULFATE ION
Authors:Tomanicek, S.J, Mueser, T.C.
Deposit date:2009-04-27
Release date:2010-05-12
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.502 Å)
Cite:Additional Order Appears in the Absence of Metals in a FEN-1 protein: Structural Analysis of Magnesium Binding to Bacteriophage T4 RNaseH
To be Published
4LS4
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BU of 4ls4 by Molmil
Crystal structure of L66S mutant toxin from Helicobacter pylori
Descriptor: BROMIDE ION, Uncharacterized protein, Toxin
Authors:Pathak, C.C, Im, H, Lee, B.J, Yoon, H.J.
Deposit date:2013-07-22
Release date:2014-02-05
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Crystal structure of apo and copper bound HP0894 toxin from Helicobacter pylori 26695 and insight into mRNase activity
Biochim.Biophys.Acta, 1834, 2013
3H8J
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BU of 3h8j by Molmil
Native T4 RNase H in the absence of divalent metal ions
Descriptor: Ribonuclease H, SODIUM ION, SULFATE ION
Authors:Tomanicek, S.J, Mueser, T.C.
Deposit date:2009-04-29
Release date:2010-05-12
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Additional Order Appears in the Absence of Metals in a FEN-1 protein: Structural Analysis of Magnesium Binding to Bacteriophage T4 RNaseH
To be Published
3UN9
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BU of 3un9 by Molmil
Crystal structure of an immune receptor
Descriptor: NLR family member X1, PLATINUM (II) ION
Authors:Hong, M, Yoon, S.I, Wilson, I.A.
Deposit date:2011-11-15
Release date:2012-03-28
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structure and Functional Characterization of the RNA-Binding Element of the NLRX1 Innate Immune Modulator.
Immunity, 36, 2012
2DNL
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BU of 2dnl by Molmil
Solution structure of RNA binding domain in Cytoplasmic polyadenylation element binding protein 3
Descriptor: cytoplasmic polyadenylation element binding protein 3
Authors:Tsuda, K, Nagata, T, Muto, Y, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-04-26
Release date:2006-10-26
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of RNA binding domain in Cytoplasmic polyadenylation element binding protein 3
To be Published
6IB8
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BU of 6ib8 by Molmil
Structure of a complex of SuhB and NusA AR2 domain
Descriptor: 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, GLYCEROL, Inositol-1-monophosphatase, ...
Authors:Huang, Y.H, Loll, B, Wahl, M.C.
Deposit date:2018-11-29
Release date:2019-04-17
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.646 Å)
Cite:Structural basis for the function of SuhB as a transcription factor in ribosomal RNA synthesis.
Nucleic Acids Res., 47, 2019
8CJW
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BU of 8cjw by Molmil
Nucleoprotein Thogotovirus delta188-196
Descriptor: 1,2-ETHANEDIOL, Nucleoprotein, PHOSPHATE ION, ...
Authors:Dick, A, Roske, Y.
Deposit date:2023-02-13
Release date:2024-06-19
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Structural characterization of Thogoto Virus nucleoprotein provides insights into viral RNA encapsidation and RNP assembly.
Structure, 2024
6B44
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BU of 6b44 by Molmil
Cryo-EM structure of Type I-F CRISPR crRNA-guided Csy surveillance complex with bound target dsDNA
Descriptor: CRISPR-associated endonuclease Cas6/Csy4, CRISPR-associated protein Csy1, CRISPR-associated protein Csy2, ...
Authors:Guo, T.W, Bartesaghi, A, Yang, H, Falconieri, V, Rao, P, Merk, A, Fox, T, Earl, L, Patel, D.J, Subramaniam, S.
Deposit date:2017-09-25
Release date:2017-10-18
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Cryo-EM Structures Reveal Mechanism and Inhibition of DNA Targeting by a CRISPR-Cas Surveillance Complex.
Cell, 171, 2017
4E8U
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BU of 4e8u by Molmil
Crystal structure of Arabidopsis IDN2 XS domain along with a small segment of adjacent coiled-coil region
Descriptor: Putative uncharacterized protein T8P19.180, SULFATE ION
Authors:Simanshu, D.K, Patel, D.J.
Deposit date:2012-03-20
Release date:2012-06-06
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.701 Å)
Cite:INVOLVED IN DE NOVO 2-containing complex involved in RNA-directed DNA methylation in Arabidopsis.
Proc.Natl.Acad.Sci.USA, 109, 2012
4CYI
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BU of 4cyi by Molmil
Chaetomium thermophilum Pan3
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, PAB-DEPENDENT POLY(A)-SPECIFIC RIBONUCLEASE SUBUNIT PAN3-LIKE PROTEIN, ...
Authors:Wolf, J, Valkov, E, Allen, M.D, Meineke, B, Gordiyenko, Y, McLaughlin, S.H, Olsen, T.M, Robinson, C.V, Bycroft, M, Stewart, M, Passmore, L.A.
Deposit date:2014-04-11
Release date:2014-06-11
Last modified:2018-04-25
Method:X-RAY DIFFRACTION (2.42 Å)
Cite:Structural Basis for Pan3 Binding to Pan2 and its Function in Mrna Recruitment and Deadenylation
Embo J., 33, 2014

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PDB entries from 2024-07-17

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