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5D9T
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BU of 5d9t by Molmil
Crystal structure of dehydroascorbate reductase (OsDHAR) from Oryza sativa L. japonica
Descriptor: Dehydroascorbate reductase, SODIUM ION
Authors:Do, H, Lee, J.H.
Deposit date:2015-08-19
Release date:2016-02-03
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural understanding of the recycling of oxidized ascorbate by dehydroascorbate reductase (OsDHAR) from Oryza sativa L. japonica
Sci Rep, 6, 2016
6ZS1
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BU of 6zs1 by Molmil
Chaetomium thermophilum CuZn-superoxide dismutase
Descriptor: COPPER (II) ION, GLYCEROL, PHOSPHATE ION, ...
Authors:Papageorgiou, A.C, Mohsin, I.
Deposit date:2020-07-15
Release date:2021-04-07
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Crystal Structure of a Cu,Zn Superoxide Dismutase From the Thermophilic Fungus Chaetomium thermophilum.
Protein Pept.Lett., 28, 2021
4OWC
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BU of 4owc by Molmil
PtI6 binding to HEWL
Descriptor: CHLORIDE ION, IODIDE ION, Lysozyme C, ...
Authors:Tanley, S.W.M, Starkey, V.L, Lamplough, L, Kaenket, S, Helliwell, J.R.
Deposit date:2014-01-31
Release date:2014-09-24
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:The binding of platinum hexahalides (Cl, Br and I) to hen egg-white lysozyme and the chemical transformation of the PtI6 octahedral complex to a PtI3 moiety bound to His15.
Acta Crystallogr.,Sect.F, 70, 2014
5DJF
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BU of 5djf by Molmil
Structure of M. tuberculosis CysQ, a PAP phosphatase - ligand-free structure
Descriptor: 3'-phosphoadenosine 5'-phosphate phosphatase, GLYCEROL, SODIUM ION
Authors:Erickson, A.I, Fisher, A.J.
Deposit date:2015-09-02
Release date:2015-11-11
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structures of Mycobacterium tuberculosis CysQ, with Substrate and Products Bound.
Biochemistry, 54, 2015
5DRF
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BU of 5drf by Molmil
Green/cyan WasCFP-pH5.5 at pH 5.5
Descriptor: GLYCEROL, SODIUM ION, WasCFP-pH5.5 at pH 5.5
Authors:Pletnev, V.Z, Pletneva, N.V, Pletnev, S.V.
Deposit date:2015-09-15
Release date:2016-07-27
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.14 Å)
Cite:Crystal structure of pH and T dependent green fluorescent protein WasCFP with Trp based chromophore
Russ.J.Bioorganic Chem., 42 (6), 2016
5DLL
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BU of 5dll by Molmil
Aminopeptidase N (pepN) from Francisella tularensis subsp. tularensis SCHU S4
Descriptor: Aminopeptidase N, CHLORIDE ION, PHOSPHATE ION, ...
Authors:Borek, D, Raczynska, J, Dubrovska, I, Grimshaw, S, Minasov, G, Shuvalova, L, Kwon, K, Anderson, W.F, Otwinowski, Z, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2015-09-07
Release date:2015-09-16
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Aminopeptidase N (pepN) from Francisella tularensis subsp. tularensis SCHU S4
To Be Published
5DQB
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BU of 5dqb by Molmil
Green/cyan WasCFP at pH 8.0
Descriptor: GLYCEROL, SODIUM ION, WasCFP_pH2
Authors:Pletnev, V, Pletneva, N, Pletnev, S.
Deposit date:2015-09-14
Release date:2016-07-27
Last modified:2019-02-20
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Crystal structure of pH and T dependent green fluorescent protein WasCFP with Trp based chromophore
Russ.J.Bioorganic Chem., 42 (6), 2016
5DJJ
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BU of 5djj by Molmil
Structure of M. tuberculosis CysQ, a PAP phosphatase with PO4 and 2Mg bound
Descriptor: 3'-phosphoadenosine 5'-phosphate phosphatase, MAGNESIUM ION, PHOSPHATE ION, ...
Authors:Fisher, A.J, Erickson, A.I.
Deposit date:2015-09-02
Release date:2015-11-11
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.501 Å)
Cite:Crystal Structures of Mycobacterium tuberculosis CysQ, with Substrate and Products Bound.
Biochemistry, 54, 2015
5DKT
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BU of 5dkt by Molmil
N-terminal His tagged apPOL exonuclease mutant
Descriptor: Prex DNA polymerase, SODIUM ION, SULFATE ION
Authors:Milton, M.E, Honzatko, R.B, Choe, J.Y, Nelson, S.W.
Deposit date:2015-09-04
Release date:2016-08-10
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal Structure of the Apicoplast DNA Polymerase from Plasmodium falciparum: The First Look at a Plastidic A-Family DNA Polymerase.
J.Mol.Biol., 428, 2016
5DLD
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BU of 5dld by Molmil
Crystal Structure of a UDP-N-acetylglucosamine 2-epimerase from Burkholderia vietnamiensis complexed with UDP-GlcNAc and UDP
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, GLYCEROL, ...
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2015-09-04
Release date:2015-09-30
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Crystal Structure of a UDP-N-acetylglucosamine 2-epimerase from Burkholderia vietnamiensis complexed with UDP-GlcNAc and UDP
to be published
4OJ1
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BU of 4oj1 by Molmil
Crystal structure of truncated Acylphosphatase from S. sulfataricus
Descriptor: Acylphosphatase, CHLORIDE ION, SODIUM ION
Authors:Dilovic, I, Bolognesi, M, Ricagno, S.
Deposit date:2014-01-20
Release date:2014-02-05
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of truncated Acylphosphatase from S. sulfataricus
TO BE PUBLISHED
5DRH
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BU of 5drh by Molmil
Crystal structure of apo C-As lyase
Descriptor: Glyoxalase/bleomycin resistance protein/dioxygenase, SODIUM ION
Authors:Venkadesh, S, Yoshinaga, M, Sankaran, B, Kandavelu, P, Rosen, B.P.
Deposit date:2015-09-15
Release date:2016-09-21
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Crystal structure of apo C-As lyase
To Be Published
7QRU
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BU of 7qru by Molmil
Structure of Bacillus pseudofirmus Mrp antiporter complex, monomer
Descriptor: 1,2-Distearoyl-sn-glycerophosphoethanolamine, Na(+)/H(+) antiporter subunit B, Na(+)/H(+) antiporter subunit C, ...
Authors:Lee, Y.
Deposit date:2022-01-12
Release date:2022-11-09
Method:ELECTRON MICROSCOPY (2.24 Å)
Cite:Ion transfer mechanisms in Mrp-type antiporters from high resolution cryoEM and molecular dynamics simulations.
Nat Commun, 13, 2022
6VSU
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BU of 6vsu by Molmil
Arginase from Arabidopsis thaliana in Complex with Ornithine
Descriptor: Arginase 1, mitochondrial, DI(HYDROXYETHYL)ETHER, ...
Authors:Sekula, B.
Deposit date:2020-02-11
Release date:2020-08-12
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:The Neighboring Subunit Is Engaged to Stabilize the Substrate in the Active Site of Plant Arginases.
Front Plant Sci, 11, 2020
6D9X
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BU of 6d9x by Molmil
Discovery of Potent 2-Aryl-6,7-Dihydro-5HPyrrolo[ 1,2-a]imidazoles as WDR5 WIN-site Inhibitors Using Fragment-Based Methods and Structure-Based Design
Descriptor: 2-phenyl-6,7-dihydro-5H-pyrrolo[1,2-a]imidazole, SODIUM ION, WD repeat-containing protein 5
Authors:Phan, J, Fesik, S.W.
Deposit date:2018-04-30
Release date:2018-09-05
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Discovery of Potent 2-Aryl-6,7-dihydro-5 H-pyrrolo[1,2- a]imidazoles as WDR5-WIN-Site Inhibitors Using Fragment-Based Methods and Structure-Based Design.
J. Med. Chem., 61, 2018
6D55
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BU of 6d55 by Molmil
Ras:SOS:Ras in complex with a small molecule activator
Descriptor: 6-chloro-2-(2,6-diazaspiro[3.3]heptan-2-yl)-1-[(4-fluoro-3,5-dimethylphenyl)methyl]-4-(4-methylpiperazin-1-yl)-1H-benzimidazole, FORMIC ACID, GLYCEROL, ...
Authors:Phan, J, Hodges, T, Fesik, S.W.
Deposit date:2018-04-19
Release date:2018-09-19
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Discovery and Structure-Based Optimization of Benzimidazole-Derived Activators of SOS1-Mediated Nucleotide Exchange on RAS.
J. Med. Chem., 61, 2018
2FV7
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BU of 2fv7 by Molmil
Crystal structure of human ribokinase
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Ribokinase, ...
Authors:Rabeh, W.M, Tempel, W, Nedyalkova, L, Arrowsmith, C, Edwards, A, Sundstrom, M, Weigelt, J, Bochkarev, A, Park, H, Structural Genomics Consortium (SGC)
Deposit date:2006-01-30
Release date:2006-02-28
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of human ribokinase
to be published
6DAM
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BU of 6dam by Molmil
Crystal structure of lanthanide-dependent methanol dehydrogenase XoxF from Methylomicrobium buryatense 5G
Descriptor: LANTHANUM (III) ION, Lanthanide-dependent methanol dehydrogenase XoxF, PYRROLOQUINOLINE QUINONE, ...
Authors:Deng, Y, Ro, S.Y, Rosenzweig, A.C.
Deposit date:2018-05-01
Release date:2018-09-05
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure and function of the lanthanide-dependent methanol dehydrogenase XoxF from the methanotroph Methylomicrobium buryatense 5GB1C.
J. Biol. Inorg. Chem., 23, 2018
6DBD
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BU of 6dbd by Molmil
Crystal Structure of VHH R326
Descriptor: ACETATE ION, SODIUM ION, nanobody VHH R326
Authors:Brooks, C.L, Toride King, M, Huh, I.
Deposit date:2018-05-03
Release date:2018-07-18
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.755 Å)
Cite:Structural basis of VHH-mediated neutralization of the food-borne pathogenListeria monocytogenes.
J. Biol. Chem., 293, 2018
2FQG
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BU of 2fqg by Molmil
Crystal Structures of E. coli Laccase CueO under different copper binding situations
Descriptor: Blue copper oxidase cueO, CITRIC ACID, COPPER (II) ION, ...
Authors:Li, X, Wei, Z, Zhang, M, Teng, M, Gong, W.
Deposit date:2006-01-18
Release date:2007-01-30
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structures of E. coli laccase CueO at different copper concentrations.
Biochem.Biophys.Res.Commun., 354, 2007
6KGH
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BU of 6kgh by Molmil
Crystal structure of Penicillin binding protein 3 (PBP3) from Mycobacterium tuerculosis (apo-form)
Descriptor: COBALT (II) ION, Penicillin-binding protein PbpB, SODIUM ION
Authors:Lu, Z.K, Zhang, A.L, Liu, X, Guddat, L, Yang, H.T, Rao, Z.H.
Deposit date:2019-07-11
Release date:2020-03-11
Method:X-RAY DIFFRACTION (2.108 Å)
Cite:Structures ofMycobacterium tuberculosisPenicillin-Binding Protein 3 in Complex with Fivebeta-Lactam Antibiotics Reveal Mechanism of Inactivation.
Mol.Pharmacol., 97, 2020
6KCD
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BU of 6kcd by Molmil
Room temperature structure of lysozyme delivered in shortening B by serial millisecond crystallography
Descriptor: CHLORIDE ION, Lysozyme C, SODIUM ION
Authors:Nam, K.H.
Deposit date:2019-06-27
Release date:2020-05-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Shortening injection matrix for serial crystallography.
Sci Rep, 10, 2020
2FWF
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BU of 2fwf by Molmil
high resolution crystal structure of the C-terminal domain of the electron transfer catalyst DsbD (reduced form)
Descriptor: IODIDE ION, SODIUM ION, Thiol:disulfide interchange protein dsbD
Authors:Stirnimann, C.U, Rozhkova, A, Grauschopf, U, Boeckmann, R.A, Glockshuber, R, Capitani, G, Gruetter, M.G.
Deposit date:2006-02-02
Release date:2006-06-13
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:High-resolution structures of Escherichia coli cDsbD in different redox states: A combined crystallographic, biochemical and computational study
J.Mol.Biol., 358, 2006
6D9D
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BU of 6d9d by Molmil
Crystal structure of Corynebacterium diphtheriae UDP-galactopyranose mutase in complex with UDP-GlcNAc (open, oxidized)
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, ISOPROPYL ALCOHOL, SODIUM ION, ...
Authors:Wangkanont, K, Kiessling, L.L, Forest, K.T.
Deposit date:2018-04-28
Release date:2019-05-15
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Substrate recognition by FAD in UDP-galactopyranose mutase
To be published
6DFH
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BU of 6dfh by Molmil
BG505 MD64 N332-GT2 SOSIP trimer in complex with germline-reverted BG18 fragment antigen binding
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein gp160, ...
Authors:Ozorowski, G, Steichen, J.M, Schief, W.R, Ward, A.B.
Deposit date:2018-05-14
Release date:2019-11-06
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (3.85 Å)
Cite:A generalized HIV vaccine design strategy for priming of broadly neutralizing antibody responses.
Science, 366, 2019

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