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7PJX
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BU of 7pjx by Molmil
Structure of the 70S-EF-G-GDP ribosome complex with tRNAs in hybrid state 1 (H1-EF-G-GDP)
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Petrychenko, V, Peng, B.Z, Schwarzer, A.C, Peske, F, Rodnina, M.V, Fischer, N.
Deposit date:2021-08-24
Release date:2021-10-20
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (6.5 Å)
Cite:Structural mechanism of GTPase-powered ribosome-tRNA movement.
Nat Commun, 12, 2021
7PIL
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BU of 7pil by Molmil
Cryo-EM structure of the Rhodobacter sphaeroides RC-LH1-PufXY monomer complex at 2.5 A
Descriptor: (2R,5R,11R,14R)-5,8,11-trihydroxy-5,11-dioxido-17-oxo-2,14-bis(tetradecanoyloxy)-4,6,10,12,16-pentaoxa-5,11-diphosphatriacont-1-yl tetradecanoate, 1,2-Distearoyl-sn-glycerophosphoethanolamine, BACTERIOCHLOROPHYLL A, ...
Authors:Qian, P, Hunter, C.N.
Deposit date:2021-08-20
Release date:2021-10-13
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:Cryo-EM structure of the monomeric Rhodobacter sphaeroides RC-LH1 core complex at 2.5 angstrom.
Biochem.J., 478, 2021
7PJ8
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BU of 7pj8 by Molmil
Crystal structure of YTHDC1 with compound DHU_DC1_225
Descriptor: N-methyl-1H-indole-4-carboxamide, SULFATE ION, YTH domain-containing protein 1
Authors:Bedi, R.K, Huang, D, Caflisch, A.
Deposit date:2021-08-23
Release date:2021-10-20
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structure-based design of ligands of the m6A-RNA reader YTHDC1
Eur J Med Chem Rep, 5, 2022
7PJW
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BU of 7pjw by Molmil
Structure of the 70S-EF-G-GDP-Pi ribosome complex with tRNAs in hybrid state 2 (H2-EF-G-GDP-Pi)
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Petrychenko, V, Peng, B.Z, Schwarzer, A.C, Peske, F, Rodnina, M.V, Fischer, N.
Deposit date:2021-08-24
Release date:2021-10-20
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Structural mechanism of GTPase-powered ribosome-tRNA movement.
Nat Commun, 12, 2021
7PMW
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BU of 7pmw by Molmil
HsPepT1 bound to Ala-Phe in the outward facing occluded conformation
Descriptor: ALA-PHE, Solute carrier family 15 member 1
Authors:Killer, M, Wald, J, Pieprzyk, J, Marlovits, T.C, Loew, C.
Deposit date:2021-09-03
Release date:2021-10-20
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Structural snapshots of human PepT1 and PepT2 reveal mechanistic insights into substrate and drug transport across epithelial membranes.
Sci Adv, 7, 2021
7PMX
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BU of 7pmx by Molmil
HsPepT1 bound to Ala-Phe in the outward facing open conformation
Descriptor: ALA-PHE, Solute carrier family 15 member 1
Authors:Killer, M, Wald, J, Pieprzyk, J, Marlovits, T.C, Loew, C.
Deposit date:2021-09-03
Release date:2021-10-20
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structural snapshots of human PepT1 and PepT2 reveal mechanistic insights into substrate and drug transport across epithelial membranes.
Sci Adv, 7, 2021
7PJY
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BU of 7pjy by Molmil
Structure of the 70S-EF-G-GDP ribosome complex with tRNAs in chimeric state 1 (CHI1-EF-G-GDP)
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Petrychenko, V, Peng, B.Z, Schwarzer, A.C, Peske, F, Rodnina, M.V, Fischer, N.
Deposit date:2021-08-24
Release date:2021-10-20
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural mechanism of GTPase-powered ribosome-tRNA movement.
Nat Commun, 12, 2021
7PJP
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BU of 7pjp by Molmil
Crystal structure of YTHDC1 with compound DHU_DC1_226
Descriptor: 5-(furan-2-yl)-N-methyl-1H-pyrazole-3-carboxamide, SULFATE ION, YTH domain-containing protein 1
Authors:Bedi, R.K, Huang, D, Caflisch, A.
Deposit date:2021-08-24
Release date:2021-10-20
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:Structure-based design of ligands of the m6A-RNA reader YTHDC1
Eur J Med Chem Rep, 5, 2022
7PJ9
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BU of 7pj9 by Molmil
Crystal structure of YTHDC1 with compound DHU_DC1_232
Descriptor: 5-bromanyl-N-methyl-1H-indazole-3-carboxamide, SULFATE ION, YTH domain-containing protein 1
Authors:Bedi, R.K, Huang, D, Caflisch, A.
Deposit date:2021-08-23
Release date:2021-10-20
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Structure-based design of ligands of the m6A-RNA reader YTHDC1
Eur J Med Chem Rep, 5, 2022
7PN1
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BU of 7pn1 by Molmil
Apo HsPepT1 in the outward facing open conformation
Descriptor: Solute carrier family 15 member 1
Authors:Killer, M, Wald, J, Pieprzyk, J, Marlovits, T.C, Loew, C.
Deposit date:2021-09-04
Release date:2021-10-20
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structural snapshots of human PepT1 and PepT2 reveal mechanistic insights into substrate and drug transport across epithelial membranes.
Sci Adv, 7, 2021
3OY8
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BU of 3oy8 by Molmil
Crystal structure of human galectin-1 in complex with lactobionic acid
Descriptor: Galectin-1, beta-D-galactopyranose-(1-4)-D-gluconic acid
Authors:Blanchard, H, Collins, P.M.
Deposit date:2010-09-23
Release date:2010-11-03
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Galectin inhibitory disaccharides promote tumour immunity in a breast cancer model
CANCER LETT., 2010
3OYW
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BU of 3oyw by Molmil
Crystal structure of human galectin-1 in complex with thiodigalactoside
Descriptor: Galectin-1, beta-D-galactopyranose-(1-1)-1-thio-beta-D-galactopyranose
Authors:Blanchard, H, Collins, P.M.
Deposit date:2010-09-23
Release date:2010-11-03
Last modified:2020-08-12
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Galectin inhibitory disaccharides promote tumour immunity in a breast cancer model
CANCER LETT., 2010
7PKS
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BU of 7pks by Molmil
Structural basis of Integrator-mediated transcription regulation
Descriptor: DNA Template, DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit F, ...
Authors:Fianu, I, Chen, Y, Dienemann, C, Cramer, P.
Deposit date:2021-08-26
Release date:2021-12-08
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structural basis of Integrator-mediated transcription regulation.
Science, 374, 2021
7PXH
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BU of 7pxh by Molmil
Emodepside-bound Drosophila Slo channel
Descriptor: (3~{S},6~{R},9~{S},12~{R},15~{S},18~{R},21~{S},24~{R})-4,6,10,16,18,22-hexamethyl-3,9,15,21-tetrakis(2-methylpropyl)-12,24-bis[(4-morpholin-4-ylphenyl)methyl]-1,7,13,19-tetraoxa-4,10,16,22-tetrazacyclotetracosane-2,5,8,11,14,17,20,23-octone, (4S,7R)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSAN-1-AMINIUM 4-OXIDE, CALCIUM ION, ...
Authors:Raisch, T, Brockmann, A, Ebbinghaus-Kintscher, U, Freigang, J, Gutbrod, O, Kubicek, J, Maertens, B, Hofnagel, O, Raunser, S.
Deposit date:2021-10-08
Release date:2021-12-15
Last modified:2021-12-22
Method:ELECTRON MICROSCOPY (2.59 Å)
Cite:Small molecule modulation of the Drosophila Slo channel elucidated by cryo-EM.
Nat Commun, 12, 2021
7PXG
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BU of 7pxg by Molmil
Verruculogen-bound Drosophila Slo channel
Descriptor: (4S,7R)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSAN-1-AMINIUM 4-OXIDE, CALCIUM ION, CHOLESTEROL, ...
Authors:Raisch, T, Brockmann, A, Ebbinghaus-Kintscher, U, Freigang, J, Gutbrod, O, Kubicek, J, Maertens, B, Hofnagel, O, Raunser, S.
Deposit date:2021-10-08
Release date:2021-12-15
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (2.73 Å)
Cite:Small molecule modulation of the Drosophila Slo channel elucidated by cryo-EM.
Nat Commun, 12, 2021
7PXF
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BU of 7pxf by Molmil
Ca2+ free Drosophila Slo channel
Descriptor: Isoform J of Calcium-activated potassium channel slowpoke, MAGNESIUM ION, POTASSIUM ION
Authors:Raisch, T, Brockmann, A, Ebbinghaus-Kintscher, U, Freigang, J, Gutbrod, O, Kubicek, J, Maertens, B, Hofnagel, O, Raunser, S.
Deposit date:2021-10-08
Release date:2021-12-15
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (2.68 Å)
Cite:Small molecule modulation of the Drosophila Slo channel elucidated by cryo-EM.
Nat Commun, 12, 2021
7PXE
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BU of 7pxe by Molmil
Ca2+ bound Drosophila Slo channel
Descriptor: (4S,7R)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSAN-1-AMINIUM 4-OXIDE, CALCIUM ION, CHOLESTEROL, ...
Authors:Raisch, T, Brockmann, A, Ebbinghaus-Kintscher, U, Freigang, J, Gutbrod, O, Kubicek, J, Maertens, B, Hofnagel, O, Raunser, S.
Deposit date:2021-10-08
Release date:2021-12-15
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (2.38 Å)
Cite:Small molecule modulation of the Drosophila Slo channel elucidated by cryo-EM.
Nat Commun, 12, 2021
3PDO
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BU of 3pdo by Molmil
Crystal Structure of HLA-DR1 with CLIP102-120
Descriptor: FORMIC ACID, GLYCEROL, HLA class II histocompatibility antigen gamma chain, ...
Authors:Gunther, S, Schlundt, A, Sticht, J, Roske, Y, Heinemann, U, Wiesmuller, K.-H, Jung, G, Falk, K, Rotzschke, O, Freund, C.
Deposit date:2010-10-23
Release date:2010-12-08
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Bidirectional binding of invariant chain peptides to an MHC class II molecule.
Proc.Natl.Acad.Sci.USA, 107, 2010
3V1K
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BU of 3v1k by Molmil
Crystal Structure of the H265Q mutant of a C-C hydrolase, BphD from Burkholderia xenovorans LB400.
Descriptor: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, MALONIC ACID
Authors:Ghosh, S, Bolin, J.T.
Deposit date:2011-12-09
Release date:2012-03-21
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Identification of an Acyl-Enzyme Intermediate in a meta-Cleavage Product Hydrolase Reveals the Versatility of the Catalytic Triad.
J.Am.Chem.Soc., 134, 2012
3V1N
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BU of 3v1n by Molmil
Crystal Structure of the H265Q mutant of a C-C hydrolase, BphD from Burkholderia xenovorans LB400, after exposure to its substrate HOPDA
Descriptor: (3E)-2,6-DIOXO-6-PHENYLHEX-3-ENOATE, 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, BENZOIC ACID, ...
Authors:Ghosh, S, Bolin, J.T.
Deposit date:2011-12-09
Release date:2012-03-21
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Identification of an Acyl-Enzyme Intermediate in a meta-Cleavage Product Hydrolase Reveals the Versatility of the Catalytic Triad.
J.Am.Chem.Soc., 134, 2012
3PJS
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BU of 3pjs by Molmil
Mechanism of Activation Gating in the Full-Length KcsA K+ Channel
Descriptor: FAB heavy chain, FAB light chain, Voltage-gated potassium channel
Authors:Uysal, S, Cuello, L.G, Kossiakoff, A, Perozo, E.
Deposit date:2010-11-10
Release date:2011-07-06
Last modified:2011-08-03
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:Mechanism of activation gating in the full-length KcsA K+ channel.
Proc.Natl.Acad.Sci.USA, 108, 2011
3PKJ
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BU of 3pkj by Molmil
Human SIRT6 crystal structure in complex with 2'-N-Acetyl ADP ribose
Descriptor: NAD-dependent deacetylase sirtuin-6, SULFATE ION, UNKNOWN ATOM OR ION, ...
Authors:Pan, P.W, Dong, A, Qiu, W, Loppnau, P, Wang, J, Ravichandran, M, Walker, J.R, Bountra, C, Weigelt, J, Arrowsmith, C.H, Min, J, Edwards, A.M, Structural Genomics Consortium (SGC)
Deposit date:2010-11-11
Release date:2011-01-26
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:Structure and biochemical functions of SIRT6.
J.Biol.Chem., 286, 2011
7PM2
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BU of 7pm2 by Molmil
Cryo-EM structure of the actomyosin-V complex in the rigor state (central 1er, young JASP-stabilized F-actin, class 4)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha skeletal muscle, ...
Authors:Pospich, S, Sweeney, H.L, Houdusse, A, Raunser, S.
Deposit date:2021-09-01
Release date:2021-12-22
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:High-resolution structures of the actomyosin-V complex in three nucleotide states provide insights into the force generation mechanism.
Elife, 10, 2021
7PMF
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BU of 7pmf by Molmil
Cryo-EM structure of the actomyosin-V complex in the post-rigor transition state (AppNHp, central 1er, class 1)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha skeletal muscle, ...
Authors:Pospich, S, Sweeney, H.L, Houdusse, A, Raunser, S.
Deposit date:2021-09-02
Release date:2021-12-22
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:High-resolution structures of the actomyosin-V complex in three nucleotide states provide insights into the force generation mechanism.
Elife, 10, 2021
7PLV
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BU of 7plv by Molmil
Cryo-EM structure of the actomyosin-V complex in the rigor state (central 1er, class 1)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha skeletal muscle, ...
Authors:Pospich, S, Sweeney, H.L, Houdusse, A, Raunser, S.
Deposit date:2021-09-01
Release date:2021-12-22
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:High-resolution structures of the actomyosin-V complex in three nucleotide states provide insights into the force generation mechanism.
Elife, 10, 2021

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