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7PGA
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BU of 7pga by Molmil
Chimeric carminomycin-4-O-methyltransferase (DnrK) with regions from 10-hydroxylase RdmB and 10-decarboxylase TamK
Descriptor: Carminomycin 4-O-methyltransferase DnrK,Methyltransferase domain-containing protein,Aclacinomycin 10-hydroxylase RdmB, S-ADENOSYL-L-HOMOCYSTEINE, methyl (1R,2R,4S)-2-ethyl-2,4,5,7-tetrahydroxy-6,11-dioxo-1,2,3,4,6,11-hexahydrotetracene-1-carboxylate
Authors:Dinis, P, MetsaKetela, M.
Deposit date:2021-08-13
Release date:2022-08-24
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.77 Å)
Cite:Evolution-inspired engineering of anthracycline methyltransferases.
Pnas Nexus, 2, 2023
7PHD
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BU of 7phd by Molmil
Chimeric carminomycin-4-O-methyltransferase (DnrK) with a region from 10-decarboxylase TamK
Descriptor: Carminomycin 4-O-methyltransferase DnrK,Methyltransferase domain-containing protein, GLYCEROL, S-ADENOSYLMETHIONINE, ...
Authors:Grocholski, T, Dinis, P, MetsaKetela, M.
Deposit date:2021-08-17
Release date:2022-09-07
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Evolution-inspired engineering of anthracycline methyltransferases.
Pnas Nexus, 2, 2023
7KR9
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BU of 7kr9 by Molmil
Bifunctional enzyme GlmU bound to Zn(II)
Descriptor: ACETYL COENZYME *A, Bifunctional protein GlmU, CALCIUM ION, ...
Authors:Maher, M.J.
Deposit date:2020-11-19
Release date:2021-12-01
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Dysregulation of Streptococcus pneumoniae zinc homeostasis breaks ampicillin resistance in a pneumonia infection model.
Cell Rep, 38, 2022
7PHE
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BU of 7phe by Molmil
Chimeric carminomycin-4-O-methyltransferase (DnrK) with regions from 10-hydroxylase RdmB and 10-decarboxylase TamK
Descriptor: Carminomycin 4-O-methyltransferase DnrK,Methyltransferase domain-containing protein,Aclacinomycin 10-hydroxylase RdmB, methyl (1R,2R,4S)-2-ethyl-2,4,5,7-tetrahydroxy-6,11-dioxo-1,2,3,4,6,11-hexahydrotetracene-1-carboxylate
Authors:Dinis, P, MetsaKetela, M.
Deposit date:2021-08-17
Release date:2022-09-07
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:Evolution-inspired engineering of anthracycline methyltransferases.
Pnas Nexus, 2, 2023
7PL3
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BU of 7pl3 by Molmil
Crystal structure of catalytic domain in closed conformation of LytB from Streptococcus pneumoniae
Descriptor: CALCIUM ION, DI(HYDROXYETHYL)ETHER, PENTAETHYLENE GLYCOL, ...
Authors:Martinez Caballero, S, Hermoso, J.A.
Deposit date:2021-08-28
Release date:2022-09-07
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Molecular basis of the final step of cell division in Streptococcus pneumoniae.
Cell Rep, 42, 2023
3ZLF
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BU of 3zlf by Molmil
Structure of group A Streptococcal enolase K312A mutant
Descriptor: ENOLASE, PHOSPHATE ION
Authors:Cork, A.J, Ericsson, D.J, Law, R.H.P, Casey, L.W, Valkov, E, Bertozzi, C, Stamp, A, Aquilina, J.A, Whisstock, J.C, Walker, M.J, Kobe, B.
Deposit date:2013-01-31
Release date:2014-02-05
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Stability of the Octameric Structure Affects Plasminogen-Binding Capacity of Streptococcal Enolase.
Plos One, 10, 2015
6COT
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BU of 6cot by Molmil
CSP2-d10
Descriptor: Competence-stimulating peptide type 2
Authors:Yang, Y.
Deposit date:2018-03-12
Release date:2018-08-29
Last modified:2018-09-19
Method:SOLUTION NMR
Cite:Structural Characterization of Competence-Stimulating Peptide Analogues Reveals Key Features for ComD1 and ComD2 Receptor Binding in Streptococcus pneumoniae.
Biochemistry, 57, 2018
8ETQ
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BU of 8etq by Molmil
Designed pentafoil knot protein folded into a trefoil knot
Descriptor: k-cTRP5
Authors:Doyle, L.A, Kibler, R.D, Bradley, P, Stoddard, B.L.
Deposit date:2022-10-17
Release date:2023-10-25
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.42 Å)
Cite:De novo design of knotted tandem repeat proteins.
Nat Commun, 14, 2023
6COU
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BU of 6cou by Molmil
CSP2-E1Ad10
Descriptor: Competence-stimulating peptide type 2
Authors:Yang, Y.
Deposit date:2018-03-12
Release date:2018-08-29
Last modified:2024-11-06
Method:SOLUTION NMR
Cite:Structural Characterization of Competence-Stimulating Peptide Analogues Reveals Key Features for ComD1 and ComD2 Receptor Binding in Streptococcus pneumoniae.
Biochemistry, 57, 2018
6COV
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BU of 6cov by Molmil
CSP2-l14
Descriptor: Competence-stimulating peptide type 2
Authors:Yang, Y.
Deposit date:2018-03-12
Release date:2018-08-29
Last modified:2024-10-23
Method:SOLUTION NMR
Cite:Structural Characterization of Competence-Stimulating Peptide Analogues Reveals Key Features for ComD1 and ComD2 Receptor Binding in Streptococcus pneumoniae.
Biochemistry, 57, 2018
7PGJ
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BU of 7pgj by Molmil
Chimeric carminomycin-4-O-methyltransferase (DnrK) with regions from 10-decarboxylate TamK and 10-hydroxylase RdmB, together with a single point mutation F297G
Descriptor: Carminomycin 4-O-methyltransferase DnrK,Methyltransferase domain-containing protein,Aclacinomycin 10-hydroxylase RdmB, S-ADENOSYL-L-HOMOCYSTEINE, methyl (1R,2R,4S)-2-ethyl-7-methoxy-2,4,5-tris(oxidanyl)-6,11-bis(oxidanylidene)-3,4-dihydro-1H-tetracene-1-carboxylate
Authors:Dinis, P, MetsaKetela, M.
Deposit date:2021-08-14
Release date:2022-08-24
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Evolution-inspired engineering of anthracycline methyltransferases.
Pnas Nexus, 2, 2023
7QQP
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BU of 7qqp by Molmil
SpCas9 bound to AAVS1 off-target3 DNA substrate
Descriptor: 1,2-ETHANEDIOL, AAVS1 off-target3 non-target strand, AAVS1 off-target3 target strand, ...
Authors:Pacesa, M, JInek, M.
Deposit date:2022-01-10
Release date:2022-10-26
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural basis for Cas9 off-target activity.
Cell, 185, 2022
7QQS
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BU of 7qqs by Molmil
SpCas9 bound to FANCF on-target DNA substrate
Descriptor: CRISPR-associated endonuclease Cas9/Csn1, FANCF on-target non-target strand, FANCF on-target target strand, ...
Authors:Pacesa, M, Jinek, M.
Deposit date:2022-01-10
Release date:2022-10-26
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural basis for Cas9 off-target activity.
Cell, 185, 2022
7QQX
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BU of 7qqx by Molmil
SpCas9 bound to FANCF off-target5 DNA substrate
Descriptor: CRISPR-associated endonuclease Cas9/Csn1, FANCF off-target5 non-target strand, FANCF off-target5 target strand, ...
Authors:Pacesa, M, Jinek, M.
Deposit date:2022-01-10
Release date:2022-10-26
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural basis for Cas9 off-target activity.
Cell, 185, 2022
7QR0
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BU of 7qr0 by Molmil
SpCas9 bound to TRAC off-target1 DNA substrate
Descriptor: CRISPR-associated endonuclease Cas9/Csn1, MAGNESIUM ION, POTASSIUM ION, ...
Authors:Pacesa, M, Jinek, M.
Deposit date:2022-01-10
Release date:2022-10-26
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis for Cas9 off-target activity.
Cell, 185, 2022
7QQZ
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BU of 7qqz by Molmil
SpCas9 bound to FANCF off-target7 DNA substrate
Descriptor: CRISPR-associated endonuclease Cas9/Csn1, FANCF off-target7 non-target strand, FANCF off-target7 target strand, ...
Authors:Pacesa, M, Jinek, M.
Deposit date:2022-01-10
Release date:2022-10-26
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural basis for Cas9 off-target activity.
Cell, 185, 2022
7QQW
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BU of 7qqw by Molmil
SpCas9 bound to FANCF off-target4 DNA substrate
Descriptor: CRISPR-associated endonuclease Cas9/Csn1, FANCF off-target4 non-target strand, FANCF off-target4 target strand, ...
Authors:Pacesa, M, Jinek, M.
Deposit date:2022-01-10
Release date:2022-10-26
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural basis for Cas9 off-target activity.
Cell, 185, 2022
7QR1
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BU of 7qr1 by Molmil
SpCas9 bound to TRAC off-target2 DNA substrate
Descriptor: CRISPR-associated endonuclease Cas9/Csn1, MAGNESIUM ION, POTASSIUM ION, ...
Authors:Pacesa, M, Jinek, M.
Deposit date:2022-01-10
Release date:2022-10-26
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural basis for Cas9 off-target activity.
Cell, 185, 2022
7QR7
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BU of 7qr7 by Molmil
SpCas9 bound to AAVS1 off-target2 DNA substrate
Descriptor: AAVS1 off-target2 non-target strand, AAVS1 off-target2 target strand, AAVS1 sgRNA, ...
Authors:Pacesa, M, JInek, M.
Deposit date:2022-01-10
Release date:2022-10-26
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural basis for Cas9 off-target activity.
Cell, 185, 2022
8G1I
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BU of 8g1i by Molmil
SpCas9 with sgRNA and target DNA
Descriptor: CRISPR-associated endonuclease Cas9/Csn1, DNA E2_NTS, DNA E2_TS, ...
Authors:Korolev, S, Gagnon, K.
Deposit date:2023-02-02
Release date:2023-05-17
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.12 Å)
Cite:SpCas9 with sgRNA and target DNA
To Be Published
8FZT
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BU of 8fzt by Molmil
SpCas9 with dual-guide RNA and target DNA
Descriptor: CRISPR-associated endonuclease Cas9/Csn1, CrE2, E2-NTS, ...
Authors:Korolev, S, Gagnon, K.
Deposit date:2023-01-30
Release date:2023-05-31
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.03 Å)
Cite:SpCas9 with dual-guide RNA and target DNA
To Be Published
3ZLH
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BU of 3zlh by Molmil
Structure of group A Streptococcal enolase
Descriptor: ENOLASE
Authors:Cork, A.J, Ericsson, D.J, Law, R.H.P, Casey, L.W, Valkov, E, Bertozzi, C, Stamp, A, Aquilina, J.A, Whisstock, J.C, Walker, M.J, Kobe, B.
Deposit date:2013-01-31
Release date:2014-02-05
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Stability of the Octameric Structure Affects Plasminogen-Binding Capacity of Streptococcal Enolase.
Plos One, 10, 2015
3ZLB
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BU of 3zlb by Molmil
Crystal structure of phosphoglycerate kinase from Streptococcus pneumoniae
Descriptor: GLYCEROL, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:Bernardo-Garcia, N, Hermoso, J.A.
Deposit date:2013-01-30
Release date:2014-02-12
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Pneumococcal phosphoglycerate kinase interacts with plasminogen and its tissue activator.
Thromb. Haemost., 111, 2014
7QQR
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BU of 7qqr by Molmil
SpCas9 bound to AAVS1 off-target5 DNA substrate
Descriptor: 1,2-ETHANEDIOL, AAVS1 off-target5 non-target strand, AAVS1 off-target5 target strand, ...
Authors:Pacesa, M, Jinek, M.
Deposit date:2022-01-10
Release date:2022-10-26
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Structural basis for Cas9 off-target activity.
Cell, 185, 2022
7QQV
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BU of 7qqv by Molmil
SpCas9 bound to FANCF off-target3 DNA substrate
Descriptor: CRISPR-associated endonuclease Cas9/Csn1, FANCF off-target3 non-target strand, FANCF off-target3 target strand, ...
Authors:Pacesa, M, Jinek, M.
Deposit date:2022-01-10
Release date:2022-10-26
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural basis for Cas9 off-target activity.
Cell, 185, 2022

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PDB entries from 2024-11-06

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