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5KKW
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BU of 5kkw by Molmil
Crystal structure of SAR11_1068 bound to a sulfobetaine (3-(1-methylpiperidinium-1-yl)propane-1-sulfonate)
Descriptor: 3-(1-methylpiperidinium-1-yl)propane-1-sulfonate, Cyclohexadienyl dehydratase, SULFATE ION
Authors:Clifton, B.E, Carr, P.D, Jackson, C.J.
Deposit date:2016-06-22
Release date:2017-07-05
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Crystal structure of SAR11_1068 bound to a sulfobetaine (3-(1-methylpiperidinium-1-yl)propane-1-sulfonate)
To Be Published
6VSG
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BU of 6vsg by Molmil
Mycobacterium tuberculosis dihydrofolate reductase in complex with 4-(trifluoromethyl)benzene-1,2-diamine(fragment 17)
Descriptor: 4-(TRIFLUOROMETHYL)BENZENE-1,2-DIAMINE, COBALT (II) ION, Dihydrofolate reductase, ...
Authors:Ribeiro, J.A, Dias, M.V.B.
Deposit date:2020-02-11
Release date:2020-07-15
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.304 Å)
Cite:Using a Fragment-Based Approach to Identify Alternative Chemical Scaffolds Targeting Dihydrofolate Reductase fromMycobacterium tuberculosis.
Acs Infect Dis., 6, 2020
5KLF
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BU of 5klf by Molmil
Structure of CBM_E1, a novel carbohydrate-binding module found by sugar cane soil metagenome, complexed with cellopentaose and gadolinium ion
Descriptor: Carbohydrate binding module E1, GADOLINIUM ATOM, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose
Authors:Liberato, M.V, Campos, B.M, Zeri, A.C.M, Squina, F.M.
Deposit date:2016-06-24
Release date:2016-09-21
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.801 Å)
Cite:A Novel Carbohydrate-binding Module from Sugar Cane Soil Metagenome Featuring Unique Structural and Carbohydrate Affinity Properties.
J.Biol.Chem., 291, 2016
8IIP
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BU of 8iip by Molmil
Complex form of MsmUdgX H109Q mutant and uracil- obtained from uracil DNA (ttUtt) post its cleavage by MsmUdgX H109Q
Descriptor: BETA-MERCAPTOETHANOL, IRON/SULFUR CLUSTER, Type-4 uracil-DNA glycosylase, ...
Authors:Aroli, S.
Deposit date:2023-02-24
Release date:2023-06-21
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Mutational and structural analyses of UdgX: insights into the active site pocket architecture and its evolution.
Nucleic Acids Res., 51, 2023
5L1P
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BU of 5l1p by Molmil
X-ray Structure of Cytochrome P450 PntM with Pentalenolactone
Descriptor: PROTOPORPHYRIN IX CONTAINING FE, Pentalenolactone synthase, pentalenolactone
Authors:Duan, L, Jogl, G, Cane, D.E.
Deposit date:2016-07-29
Release date:2016-09-14
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:The Cytochrome P450-Catalyzed Oxidative Rearrangement in the Final Step of Pentalenolactone Biosynthesis: Substrate Structure Determines Mechanism.
J.Am.Chem.Soc., 138, 2016
8IIS
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BU of 8iis by Molmil
MsmUdgX H109S/R184A double mutant
Descriptor: IRON/SULFUR CLUSTER, Type-4 uracil-DNA glycosylase
Authors:Aroli, S.
Deposit date:2023-02-24
Release date:2023-06-21
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:Mutational and structural analyses of UdgX: insights into the active site pocket architecture and its evolution.
Nucleic Acids Res., 51, 2023
8IIJ
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BU of 8iij by Molmil
H109G mutant of uracil DNA glycosylase X
Descriptor: BETA-MERCAPTOETHANOL, IRON/SULFUR CLUSTER, Type-4 uracil-DNA glycosylase
Authors:Aroli, S.
Deposit date:2023-02-24
Release date:2023-06-21
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Mutational and structural analyses of UdgX: insights into the active site pocket architecture and its evolution.
Nucleic Acids Res., 51, 2023
5KLR
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BU of 5klr by Molmil
Prototypical P4[R]cNLS
Descriptor: Importin subunit alpha-1, Prototypical P4[R]cNLS
Authors:Smith, K.M, Forwood, J.K.
Deposit date:2016-06-25
Release date:2016-07-27
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Contribution of the residue at position 4 within classical nuclear localization signals to modulating interaction with importins and nuclear targeting.
Biochim Biophys Acta Mol Cell Res, 1865, 2018
8IIF
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BU of 8iif by Molmil
H109A mutant of uracil DNA glycosylase X
Descriptor: GLYCEROL, IRON/SULFUR CLUSTER, Type-4 uracil-DNA glycosylase
Authors:Aroli, S.
Deposit date:2023-02-24
Release date:2023-06-21
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Mutational and structural analyses of UdgX: insights into the active site pocket architecture and its evolution.
Nucleic Acids Res., 51, 2023
6W5H
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BU of 6w5h by Molmil
1.85 A resolution structure of Norovirus 3CL protease in complex with inhibitor 5d
Descriptor: 2-(3-chlorophenyl)-2-methylpropyl [(2S)-3-cyclohexyl-1-({(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}amino)-1-oxopropan-2-yl]carbamate, 3C-LIKE PROTEASE
Authors:Lovell, S, Kashipathy, M.M, Battaile, K.P, Rathnayake, A.D, Kim, Y, Chang, K.O, Groutas, W.C.
Deposit date:2020-03-13
Release date:2020-09-30
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure-Guided Optimization of Dipeptidyl Inhibitors of Norovirus 3CL Protease.
J.Med.Chem., 63, 2020
8EWW
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BU of 8eww by Molmil
Structure of Arabidopsis fatty acid amide hydrolase mutant S305A
Descriptor: Fatty acid amide hydrolase
Authors:Aziz, M, Wang, X, Gaguancela, O.A, Chapman, K.D.
Deposit date:2022-10-24
Release date:2024-05-29
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural interactions explain the versatility of FAAH in the hydrolysis of plant and microbial acyl amide signals
To be published
8EY9
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BU of 8ey9 by Molmil
Structure of Arabidopsis fatty acid amide hydrolase mutant S305A in complex with 9-hydroxy-10,12-octadecadienoyl-ethanolamide
Descriptor: (9R,10E,12Z)-9-hydroxy-N-(2-hydroxyethyl)octadeca-10,12-dienamide, Fatty acid amide hydrolase
Authors:Aziz, M, Wang, X, Gaguancela, O.A, Chapman, K.D.
Deposit date:2022-10-26
Release date:2024-05-29
Method:X-RAY DIFFRACTION (3.59 Å)
Cite:Structural interactions explain the versatility of FAAH in the hydrolysis of plant and microbial acyl amide signals
To be published
8IIN
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BU of 8iin by Molmil
Complex form of MsmUdgX H109K mutant and uracil- obtained from uracil DNA (ttUtt) post its cleavage by MsmUdgX H109K
Descriptor: IRON/SULFUR CLUSTER, Type-4 uracil-DNA glycosylase, URACIL
Authors:Aroli, S.
Deposit date:2023-02-24
Release date:2023-06-21
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:Mutational and structural analyses of UdgX: insights into the active site pocket architecture and its evolution.
Nucleic Acids Res., 51, 2023
8ILX
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BU of 8ilx by Molmil
mCherry-LaM3 complex
Descriptor: LAM3, MCherry fluorescent protein
Authors:Liang, H, Liu, R, Ding, Y.
Deposit date:2023-03-05
Release date:2023-06-21
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (3.29 Å)
Cite:Structural Insights into the Binding of Red Fluorescent Protein mCherry-Specific Nanobodies.
Int J Mol Sci, 24, 2023
4YGM
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BU of 4ygm by Molmil
Vaccinia virus his-D4/A20(1-50) in complex with uracil
Descriptor: DNA polymerase processivity factor component A20, SULFATE ION, URACIL, ...
Authors:Tarbouriech, N, Iseni, F, Burmeister, W.P.
Deposit date:2015-02-26
Release date:2015-06-10
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal Structure of the Vaccinia Virus Uracil-DNA Glycosylase in Complex with DNA.
J.Biol.Chem., 290, 2015
8EY1
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BU of 8ey1 by Molmil
Structure of Arabidopsis fatty acid amide hydrolase mutant S305A in complex with N-(3-oxododecanoyl)-L-homoserine lactone
Descriptor: Fatty acid amide hydrolase, N-3-OXO-DODECANOYL-L-HOMOSERINE LACTONE
Authors:Aziz, M, Wang, X, Gaguancela, O.A, Chapman, K.D.
Deposit date:2022-10-26
Release date:2024-05-29
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural interactions explain the versatility of FAAH in the hydrolysis of plant and microbial acyl amide signals
To be published
8F2Z
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BU of 8f2z by Molmil
LSD1-CoREST in complex with AW2, short soaking
Descriptor: Lysine-specific histone demethylase 1A, REST corepressor 1, [(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methyl (2R,3S,4S)-5-[(1R,3S,3aS,13R)-3-([1,1'-biphenyl]-4-yl)-1-hydroxy-10,11-dimethyl-4,6-dioxo-2,3,5,6-tetrahydro-1H-benzo[g]pyrrolo[2,1-e]pteridin-8(4H)-yl]-2,3,4-trihydroxypentyl dihydrogen diphosphate (non-preferred name)
Authors:Caroli, J, Mattevi, A.
Deposit date:2022-11-09
Release date:2024-06-12
Method:X-RAY DIFFRACTION (3 Å)
Cite:Distal drug resistance mutations promote covalent inhibitor-adduct Grob fragmentation in LSD1
to be published
6W69
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BU of 6w69 by Molmil
The structure of F64, S172A Keap1-BTB domain
Descriptor: Kelch-like ECH-associated protein 1
Authors:Mena, E.L, Gee, C.L, Kuriyan, J, Rape, M.
Deposit date:2020-03-16
Release date:2020-08-19
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.501 Å)
Cite:Structural basis for dimerization quality control.
Nature, 586, 2020
8F30
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BU of 8f30 by Molmil
LSD1-CoREST in complex with AW2, long soaking
Descriptor: Lysine-specific histone demethylase 1A, REST corepressor 1, [(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methyl (2R,3S,4S)-5-{5-[3-([1,1'-biphenyl]-4-yl)propanoyl]-7,8-dimethyl-2,4-dioxo-1,3,4,5-tetrahydrobenzo[g]pteridin-10(2H)-yl}-2,3,4-trihydroxypentyl dihydrogen diphosphate (non-preferred name)
Authors:Caroli, J, Mattevi, A.
Deposit date:2022-11-09
Release date:2024-06-12
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Distal drug resistance mutations promote covalent inhibitor-adduct Grob fragmentation in LSD1
to be published
8IGV
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BU of 8igv by Molmil
Hexameric Ring Complex of Engineered V1-ATPase bound to 5 ADPs: A3(De)3_(ADP-Pi)1cat(ADP)2cat,2non-cat
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, PHOSPHATE ION, ...
Authors:Kosugi, T, Tanabe, M, Koga, N.
Deposit date:2023-02-21
Release date:2023-07-12
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Design of allosteric sites into rotary motor V 1 -ATPase by restoring lost function of pseudo-active sites.
Nat.Chem., 15, 2023
5KLC
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BU of 5klc by Molmil
Structure of CBM_E1, a novel carbohydrate-binding module found by sugar cane soil metagenome
Descriptor: Carbohydrate binding module E1
Authors:Liberato, M.V, Campos, B.M, Zeri, A.C.M, Squina, F.M.
Deposit date:2016-06-24
Release date:2016-09-21
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.746 Å)
Cite:A Novel Carbohydrate-binding Module from Sugar Cane Soil Metagenome Featuring Unique Structural and Carbohydrate Affinity Properties.
J.Biol.Chem., 291, 2016
8IIR
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BU of 8iir by Molmil
MsmUdgX H109S/Q53A double mutant
Descriptor: BETA-MERCAPTOETHANOL, IRON/SULFUR CLUSTER, Type-4 uracil-DNA glycosylase
Authors:Aroli, S.
Deposit date:2023-02-24
Release date:2023-06-21
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Mutational and structural analyses of UdgX: insights into the active site pocket architecture and its evolution.
Nucleic Acids Res., 51, 2023
8F59
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BU of 8f59 by Molmil
LSD1-CoREST in complex with AW2 and SNAG peptide
Descriptor: Lysine-specific histone demethylase 1A, REST corepressor 1, Zinc finger protein SNAI1, ...
Authors:Caroli, J, Mattevi, A.
Deposit date:2022-11-12
Release date:2024-06-12
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Distal drug resistance mutations promote covalent inhibitor-adduct Grob fragmentation in LSD1
to be published
5KM9
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BU of 5km9 by Molmil
Human Histidine Triad Nucleotide Binding Protein 2 (hHint2) adenosine complex
Descriptor: ADENOSINE, CHLORIDE ION, GLYCEROL, ...
Authors:Maize, K.M, Finzel, B.C.
Deposit date:2016-06-26
Release date:2017-06-28
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:A Crystal Structure Based Guide to the Design of Human Histidine Triad Nucleotide Binding Protein 1 (hHint1) Activated ProTides.
Mol. Pharm., 14, 2017
8IM1
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BU of 8im1 by Molmil
mCherry-LaM1 complex
Descriptor: LaM1, MCherry fluorescent protein, SULFATE ION
Authors:Liang, H, Liu, R, Ding, Y.
Deposit date:2023-03-05
Release date:2023-06-21
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural Insights into the Binding of Red Fluorescent Protein mCherry-Specific Nanobodies.
Int J Mol Sci, 24, 2023

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PDB entries from 2024-10-30

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