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7UWS
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BU of 7uws by Molmil
Atomic model of the partial VSV nucleocapsid
Descriptor: Matrix protein, Nucleoprotein, RNA
Authors:Zhou, K, Si, Z, Ge, P, Tsao, J, Luo, M, Zhou, Z.H.
Deposit date:2022-05-03
Release date:2022-09-28
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.47 Å)
Cite:Atomic model of vesicular stomatitis virus and mechanism of assembly.
Nat Commun, 13, 2022
7NT5
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BU of 7nt5 by Molmil
CryoEM structure of the Nipah virus nucleocapsid single helical turn assembly
Descriptor: Nucleoprotein, RNA (78-MER)
Authors:Ker, D.S, Jenkins, H.T, Greive, S.J, Antson, A.A.
Deposit date:2021-03-09
Release date:2021-07-07
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:CryoEM structure of the Nipah virus nucleocapsid assembly.
Plos Pathog., 17, 2021
6GWJ
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BU of 6gwj by Molmil
Human OSGEP / LAGE3 / GON7 complex
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DI(HYDROXYETHYL)ETHER, EKC/KEOPS complex subunit GON7, ...
Authors:Missoury, S, Liger, D, Durand, D, Collinet, B, Tilbeurgh, V.H.
Deposit date:2018-06-25
Release date:2019-07-03
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Defects in t 6 A tRNA modification due to GON7 and YRDC mutations lead to Galloway-Mowat syndrome.
Nat Commun, 10, 2019
7Y41
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BU of 7y41 by Molmil
Mycobacterium smegmatis 50S ribosomal subunit from Log Phase of growth
Descriptor: 23S ribosomal RNA, 50S ribosomal protein L10, 50S ribosomal protein L11, ...
Authors:Sengupta, J, Baid, P.
Deposit date:2022-06-13
Release date:2023-05-03
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Cryo-EM captures a unique conformational rearrangement in 23S rRNA helices of the Mycobacterium 50S subunit.
Int.J.Biol.Macromol., 253, 2023
5KIP
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BU of 5kip by Molmil
Asymmetric unit for the coat proteins of phage Qbeta
Descriptor: Coat protein
Authors:Gorzelnik, K.V, Cui, Z, Zhang, J.
Deposit date:2016-06-16
Release date:2016-10-05
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Asymmetric cryo-EM structure of the canonical Allolevivirus Q beta reveals a single maturation protein and the genomic ssRNA in situ.
Proc.Natl.Acad.Sci.USA, 113, 2016
3KRM
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BU of 3krm by Molmil
Imp1 kh34
Descriptor: GLYCEROL, Insulin-like growth factor 2 mRNA-binding protein 1
Authors:Chao, J.A, Singer, R.H, Almo, S.C, Patskovsky, Y.
Deposit date:2009-11-18
Release date:2010-02-09
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:ZBP1 recognition of beta-actin zipcode induces RNA looping.
Genes Dev., 24, 2010
5EMG
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BU of 5emg by Molmil
Crystal structures of PNA p(GCTGCTGC)2 duplex containing T-T mismatches
Descriptor: CHLORIDE ION, GPN-CPN-TPN-GPN-CPN-TPN-GPN-CPN, SODIUM ION
Authors:Kiliszek, A, Banaszak, K, Dauter, Z, Rypniewski, W.
Deposit date:2015-11-06
Release date:2016-01-13
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.06 Å)
Cite:The first crystal structures of RNA-PNA duplexes and a PNA-PNA duplex containing mismatches-toward anti-sense therapy against TREDs.
Nucleic Acids Res., 44, 2016
2ZHB
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BU of 2zhb by Molmil
Complex structure of AFCCA with tRNAminiDUC
Descriptor: CCA-adding enzyme, SULFATE ION, tRNA (34-MER)
Authors:Toh, Y, Tomita, K.
Deposit date:2008-02-01
Release date:2008-08-05
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:Molecular basis for maintenance of fidelity during the CCA-adding reaction by a CCA-adding enzyme
Embo J., 27, 2008
2ZH7
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BU of 2zh7 by Molmil
Complex structure of AFCCA with tRNAminiDG
Descriptor: CCA-adding enzyme, SULFATE ION, tRNA (33-MER)
Authors:Toh, Y, Tomita, K.
Deposit date:2008-02-01
Release date:2008-08-05
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Molecular basis for maintenance of fidelity during the CCA-adding reaction by a CCA-adding enzyme
Embo J., 27, 2008
7T1N
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BU of 7t1n by Molmil
Solution structure of 7SK stem-loop 1 with HEXIM Arginine Rich Motif
Descriptor: HEXIM Arginine Rich Motif, RNA (56-MER)
Authors:Pham, V.V, Gao, M, D'Souza, V.M.
Deposit date:2021-12-02
Release date:2022-09-14
Last modified:2024-05-15
Method:SOLUTION NMR, SOLUTION SCATTERING
Cite:A structure-based mechanism for displacement of the HEXIM adapter from 7SK small nuclear RNA.
Commun Biol, 5, 2022
7T1O
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BU of 7t1o by Molmil
Solution structure of 7SK stem-loop 1 with HIV-1 Tat Subtype G Arginine Rich Motif
Descriptor: 7SK stem-loop 1 RNA (56-MER), Tat Subtype G Arginine Rich Motif
Authors:Pham, V.V, Gao, M, D'Souza, V.M.
Deposit date:2021-12-02
Release date:2022-09-14
Last modified:2024-05-15
Method:SOLUTION NMR, SOLUTION SCATTERING
Cite:A structure-based mechanism for displacement of the HEXIM adapter from 7SK small nuclear RNA.
Commun Biol, 5, 2022
2X04
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BU of 2x04 by Molmil
Crystal structure of the PABC-TNRC6C complex
Descriptor: POLYADENYLATE-BINDING PROTEIN 1, SULFATE ION, TRINUCLEOTIDE REPEAT-CONTAINING GENE 6C PROTEIN
Authors:Jinek, M, Fabian, M.R, Coyle, S.M, Sonenberg, N, Doudna, J.A.
Deposit date:2009-12-04
Release date:2010-01-19
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Structural Insights Into the Human Gw182-Pabc Interaction in Microrna-Mediated Deadenylation
Nat.Struct.Mol.Biol., 17, 2010
2ZH8
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BU of 2zh8 by Molmil
Complex structure of AFCCA with tRNAminiDGC
Descriptor: CCA-adding enzyme, SULFATE ION, tRNA (34-MER)
Authors:Toh, Y, Tomita, K.
Deposit date:2008-02-01
Release date:2008-08-05
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Molecular basis for maintenance of fidelity during the CCA-adding reaction by a CCA-adding enzyme
Embo J., 27, 2008
2ZH9
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BU of 2zh9 by Molmil
Complex structure of AFCCA with tRNAminiDU
Descriptor: CCA-adding enzyme, SULFATE ION, tRNA (33-MER)
Authors:Toh, Y, Tomita, K.
Deposit date:2008-02-01
Release date:2008-08-05
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Molecular basis for maintenance of fidelity during the CCA-adding reaction by a CCA-adding enzyme
Embo J., 27, 2008
2ZHA
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BU of 2zha by Molmil
Complex structure of AFCCA with tRNAminiDU and CTP
Descriptor: CCA-adding enzyme, CYTIDINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Toh, Y, Tomita, K.
Deposit date:2008-02-01
Release date:2008-08-05
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Molecular basis for maintenance of fidelity during the CCA-adding reaction by a CCA-adding enzyme
Embo J., 27, 2008
7UIU
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BU of 7uiu by Molmil
N2 sub-domain of IF2 bound to the 30S subunit in the Pseudomonas aeruginosa 70S ribosome initiation complex (focused classification and refinement)
Descriptor: Translation initiation factor IF-2
Authors:Basu, R.S, Sherman, M.B, Gagnon, M.G.
Deposit date:2022-03-29
Release date:2022-06-22
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Compact IF2 allows initiator tRNA accommodation into the P site and gates the ribosome to elongation.
Nat Commun, 13, 2022
7PCR
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BU of 7pcr by Molmil
Helicobacter pylori RNase J
Descriptor: Ribonuclease J
Authors:Luisi, B.F, Pei, X.Y.
Deposit date:2021-08-03
Release date:2022-05-25
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Acetylation regulates the oligomerization state and activity of RNase J, the Helicobacter pylori major ribonuclease.
Nat Commun, 14, 2023
4YN6
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BU of 4yn6 by Molmil
Structural Insight reveals dynamics in repeating r(CAG) transcript found in Huntington's disease (HD) and Spinocerebellar ataxias (SCAs)
Descriptor: PHOSPHATE ION, RNA (5'-R(P*UP*UP*GP*GP*GP*CP*CP*AP*GP*CP*AP*GP*CP*AP*GP*GP*UP*CP*C)-3')
Authors:Tawani, A, Kumar, A.
Deposit date:2015-03-09
Release date:2015-04-22
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.301 Å)
Cite:Structural Insights Reveal the Dynamics of the Repeating r(CAG) Transcript Found in Huntington's Disease (HD) and Spinocerebellar Ataxias (SCAs)
Plos One, 10, 2015
2BBV
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BU of 2bbv by Molmil
THE REFINED THREE-DIMENSIONAL STRUCTURE OF AN INSECT VIRUS AT 2.8 ANGSTROMS RESOLUTION
Descriptor: CALCIUM ION, PROTEIN (BLACK BEETLE VIRUS CAPSID PROTEIN), RNA (5'-R(*UP*CP*UP*UP*AP*UP*AP*UP*CP*U)-3')
Authors:Wery, J.-P, Reddy, V.S, Hosur, M.V, Johnson, J.E.
Deposit date:1994-06-06
Release date:1994-08-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The refined three-dimensional structure of an insect virus at 2.8 A resolution.
J.Mol.Biol., 235, 1994
2ZH6
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BU of 2zh6 by Molmil
Complex structure of AFCCA with tRNAminiDCU and ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CCA-adding enzyme, MAGNESIUM ION, ...
Authors:Toh, Y, Tomita, K.
Deposit date:2008-02-01
Release date:2008-08-05
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Molecular basis for maintenance of fidelity during the CCA-adding reaction by a CCA-adding enzyme
Embo J., 27, 2008
2ZH4
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BU of 2zh4 by Molmil
Complex structure of AFCCA with tRNAminiDCG
Descriptor: CCA-adding enzyme, SULFATE ION, tRNA (34-MER)
Authors:Toh, Y, Tomita, K.
Deposit date:2008-02-01
Release date:2008-08-05
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Molecular basis for maintenance of fidelity during the CCA-adding reaction by a CCA-adding enzyme
Embo J., 27, 2008
2ZH2
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BU of 2zh2 by Molmil
Complex structure of AFCCA with tRNAminiDAC
Descriptor: CCA-adding enzyme, SULFATE ION, tRNA (34-MER)
Authors:Toh, Y, Tomita, K.
Deposit date:2008-02-01
Release date:2008-08-05
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.66 Å)
Cite:Molecular basis for maintenance of fidelity during the CCA-adding reaction by a CCA-adding enzyme
Embo J., 27, 2008
2ZH3
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BU of 2zh3 by Molmil
Complex structure of AFCCA with tRNAminiDCA
Descriptor: CCA-adding enzyme, SULFATE ION, tRNA (34-MER)
Authors:Toh, Y, Tomita, K.
Deposit date:2008-02-01
Release date:2008-08-05
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Molecular basis for maintenance of fidelity during the CCA-adding reaction by a CCA-adding enzyme
Embo J., 27, 2008
2ZH5
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BU of 2zh5 by Molmil
Complex structure of AFCCA with tRNAminiDCU
Descriptor: CCA-adding enzyme, SULFATE ION, tRNA (34-MER)
Authors:Toh, Y, Tomita, K.
Deposit date:2008-02-01
Release date:2008-08-05
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Molecular basis for maintenance of fidelity during the CCA-adding reaction by a CCA-adding enzyme
Embo J., 27, 2008
2R1G
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BU of 2r1g by Molmil
Coordinates of the thermus thermophilus 30S components neighboring RbfA as obtained by fitting into the CRYO-EM map of A 30S-RBFA complex
Descriptor: 16S RIBOSOMAL RNA HELIX 1, 16S RIBOSOMAL RNA HELIX 18, 16S RIBOSOMAL RNA HELIX 27, ...
Authors:Datta, P.P, Wilson, D.N, Kawazoe, M, Swami, N.K, Kaminishi, T, Sharma, M.R, Booth, T.M, Takemoto, C, Fucini, P, Yokoyama, S, Agrawal, R.K.
Deposit date:2007-08-22
Release date:2008-03-18
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (12.5 Å)
Cite:Structural aspects of RbfA action during small ribosomal subunit assembly.
Mol.Cell, 28, 2007

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