PDB: 98078 resultsInfo pagesStatus searchChemie searchBIRD

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6XPB	Structure of human GGT1 in complex with 2-amino-4-(((1-((carboxymethyl)amino)-1-oxobutan-2-yl)oxy)(phenoxy)phosphoryl)butanoic acid (ACPB) molecule Descriptor: 2,2-diamino-4-[(S)-({(2S)-1-[(carboxymethyl)amino]-1-oxobutan-2-yl}oxy)(hydroxy)phosphanyl]butanoic acid, 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, ... Authors: Terzyan, S.S, Hanigan, M.H. Deposit date: 2020-07-08 Release date: 2020-11-25 Last modified: 2024-11-20 Method: X-RAY DIFFRACTION (1.74 Å) Cite: Crystal structures of glutathione- and inhibitor-bound human GGT1: critical interactions within the cysteinylglycine binding site. J.Biol.Chem., 296, 2020
6XO3	ScoE with alpha-ketoglutarate in an off-site Descriptor: 2-OXOGLUTARIC ACID, CHLORIDE ION, FE (II) ION, ... Authors: Jonnalagadda, R, Drennan, C.L. Deposit date: 2020-07-06 Release date: 2021-01-06 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (1.85 Å) Cite: Biochemical and crystallographic investigations into isonitrile formation by a nonheme iron-dependent oxidase/decarboxylase. J.Biol.Chem., 296, 2021
2QHS	Structural Basis of Octanoic Acid Recognition by Lipoate-Protein Ligase B Descriptor: Lipoyltransferase, OCTANOIC ACID (CAPRYLIC ACID) Authors: Kim, D.J, Lee, S.J, Kim, H.S, Kim, K.H, Lee, H.H, Yoon, H.J, Suh, S.W. Deposit date: 2007-07-02 Release date: 2008-02-26 Last modified: 2024-10-30 Method: X-RAY DIFFRACTION (1.5 Å) Cite: Structural basis of octanoic acid recognition by lipoate-protein ligase B Proteins, 70, 2008
9GOZ	4-Allyl syringol oxidase from Streptomyces cavernae: complex with eugenol Descriptor: 1-ETHOXY-2-(2-ETHOXYETHOXY)ETHANE, 2-methoxy-4-(prop-2-en-1-yl)phenol, 4-allyl syringol oxidase from Streptomyces cavernae, ... Authors: Mattevi, A, Alvigini, L. Deposit date: 2024-09-06 Release date: 2025-02-05 Last modified: 2025-02-12 Method: X-RAY DIFFRACTION (1.4 Å) Cite: Kinetic and structural investigation of the 4-allyl syringol oxidase from Streptomyces cavernae. Arch.Biochem.Biophys., 765, 2025
2QHV	Structural Basis of Octanoic Acid Recognition by Lipoate-Protein Ligase B Descriptor: Lipoyltransferase, OCTAN-1-OL Authors: Kim, D.J, Lee, S.J, Kim, H.S, Kim, K.H, Lee, H.H, Yoon, H.J, Suh, S.W. Deposit date: 2007-07-03 Release date: 2008-02-26 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Structural basis of octanoic acid recognition by lipoate-protein ligase B Proteins, 70, 2008
9GP2	apoJ22.9 Unliganded structure of an Fab fragment from the therapeutic antibody J22.9-xi Descriptor: Chains: H, Chains: L Authors: Marino, S.F, Daumke, O. Deposit date: 2024-09-06 Release date: 2024-09-25 Last modified: 2024-10-23 Method: X-RAY DIFFRACTION (1.97 Å) Cite: apoJ22.9 Unliganded structure of an Fab fragment from the therapeutic antibody J22.9-xi To Be Published
2QHT	Structural Basis of Octanoic Acid Recognition by Lipoate-Protein Ligase B Descriptor: Lipoyltransferase Authors: Kim, D.J, Lee, S.J, Kim, H.S, Kim, K.H, Lee, H.H, Yoon, H.J, Suh, S.W. Deposit date: 2007-07-02 Release date: 2008-02-26 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (1.5 Å) Cite: Structural basis of octanoic acid recognition by lipoate-protein ligase B Proteins, 70, 2008
9GOV	4-Allyl syringol oxidase from Streptomyces cavernae: complex with Propanol syringol Descriptor: 2,6-dimethoxy-4-(3-oxidanylpropyl)phenol, 4-Allyl syringol oxidase from Streptomyces cavernae, FLAVIN-ADENINE DINUCLEOTIDE Authors: Alvigini, L, Mattevi, A. Deposit date: 2024-09-06 Release date: 2025-02-05 Last modified: 2025-02-12 Method: X-RAY DIFFRACTION (2 Å) Cite: Kinetic and structural investigation of the 4-allyl syringol oxidase from Streptomyces cavernae. Arch.Biochem.Biophys., 765, 2025
1GUG	MopII from Clostridium pasteurianum complexed with tungstate Descriptor: CHLORIDE ION, MOLYBDATE BINDING PROTEIN II, SODIUM ION, ... Authors: Schuettelkopf, A.W, Harrison, J.A, Hunter, W.N. Deposit date: 2002-01-25 Release date: 2002-02-08 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Passive Acquisition of Ligand by the Mopii Molbindin from Clostridium Pasteurianum: Structures of Apo and Oxyanion-Bound Forms J.Biol.Chem., 277, 2002
4DK3	Structure of Editosome protein Descriptor: RNA-editing complex protein MP81, single domain antibody VHH Authors: Park, Y.-J, Hol, W. Deposit date: 2012-02-03 Release date: 2012-07-04 Last modified: 2024-10-16 Method: X-RAY DIFFRACTION (2.76 Å) Cite: The structure of the C-terminal domain of the largest editosome interaction protein and its role in promoting RNA binding by RNA-editing ligase L2. Nucleic Acids Res., 40, 2012
4DKA	Structure of Editosome protein Descriptor: RNA-editing complex protein MP81, SODIUM ION, single domain antibody VHH Authors: Park, Y.-J, Hol, W. Deposit date: 2012-02-03 Release date: 2012-07-04 Last modified: 2024-11-27 Method: X-RAY DIFFRACTION (1.97 Å) Cite: The structure of the C-terminal domain of the largest editosome interaction protein and its role in promoting RNA binding by RNA-editing ligase L2. Nucleic Acids Res., 40, 2012
9GP0	4-allyl syringol oxidase from Streptomyces cavernae: complex with Vanillyl alcohol Descriptor: 4-allyl syringol oxidase from Streptomyces cavernae, 4-hydroxy-3-methoxybenzaldehyde, FLAVIN-ADENINE DINUCLEOTIDE Authors: Mattevi, A, Alvigini, L. Deposit date: 2024-09-06 Release date: 2025-02-05 Last modified: 2025-02-12 Method: X-RAY DIFFRACTION (1.75 Å) Cite: Kinetic and structural investigation of the 4-allyl syringol oxidase from Streptomyces cavernae. Arch.Biochem.Biophys., 765, 2025
4RKI	Crystal structure of sliding beta clamp from Helicobacter pylori Descriptor: DNA polymerase III subunit beta Authors: Satyawali, P, Tarique, K.F, Abdul Rehman, S.A, Gourinath, S. Deposit date: 2014-10-13 Release date: 2016-01-13 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.05 Å) Cite: Structural insight into beta-Clamp and its interaction with DNA Ligase in Helicobacter pylori. Sci Rep, 6, 2016
6XN6	ScoE with the CABA substrate bound and His299 and Arg157 flipped out Descriptor: (3~{R})-3-(2-hydroxy-2-oxoethylamino)butanoic acid, ACETATE ION, CHLORIDE ION, ... Authors: Jonnalagadda, R, Drennan, C.L. Deposit date: 2020-07-02 Release date: 2021-01-06 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Biochemical and crystallographic investigations into isonitrile formation by a nonheme iron-dependent oxidase/decarboxylase. J.Biol.Chem., 296, 2021
8FNN	Structure of E138K/G140A/Q148K HIV-1 intasome with Dolutegravir bound Descriptor: (4R,12aS)-N-(2,4-difluorobenzyl)-7-hydroxy-4-methyl-6,8-dioxo-3,4,6,8,12,12a-hexahydro-2H-pyrido[1',2':4,5]pyrazino[2,1-b][1,3]oxazine-9-carboxamide, DNA (25-MER), DNA (27-MER), ... Authors: Shan, Z.L, Passos, D.O, Strutzenberg, T.S, Li, M, Lyumkis, D. Deposit date: 2022-12-27 Release date: 2023-08-09 Last modified: 2024-06-19 Method: ELECTRON MICROSCOPY (2.7 Å) Cite: Mechanisms of HIV-1 integrase resistance to dolutegravir and potent inhibition of drug-resistant variants. Sci Adv, 9, 2023
8FNJ	Structure of E138K/G140A HIV-1 intasome with Dolutegravir bound Descriptor: (4R,12aS)-N-(2,4-difluorobenzyl)-7-hydroxy-4-methyl-6,8-dioxo-3,4,6,8,12,12a-hexahydro-2H-pyrido[1',2':4,5]pyrazino[2,1-b][1,3]oxazine-9-carboxamide, DNA (25-MER), DNA (27-MER), ... Authors: Shan, Z.L, Passos, D.O, Strutzenberg, T.S, Li, M, Lyumkis, D. Deposit date: 2022-12-27 Release date: 2023-08-09 Last modified: 2025-03-26 Method: ELECTRON MICROSCOPY (2.4 Å) Cite: Mechanisms of HIV-1 integrase resistance to dolutegravir and potent inhibition of drug-resistant variants. Sci Adv, 9, 2023
8FN7	Structure of WT HIV-1 intasome bound to Dolutegravir Descriptor: (4R,12aS)-N-(2,4-difluorobenzyl)-7-hydroxy-4-methyl-6,8-dioxo-3,4,6,8,12,12a-hexahydro-2H-pyrido[1',2':4,5]pyrazino[2,1-b][1,3]oxazine-9-carboxamide, DNA (25-MER), DNA (27-MER), ... Authors: Shan, Z.L, Passos, D.O, Strutzenberg, T.S, Li, M, Lyumkis, D. Deposit date: 2022-12-27 Release date: 2023-08-09 Last modified: 2024-11-06 Method: ELECTRON MICROSCOPY (2.8 Å) Cite: Mechanisms of HIV-1 integrase resistance to dolutegravir and potent inhibition of drug-resistant variants. Sci Adv, 9, 2023
8FNL	Structure of E138K/Q148K HIV-1 intasome with Dolutegravir bound Descriptor: (4R,12aS)-N-(2,4-difluorobenzyl)-7-hydroxy-4-methyl-6,8-dioxo-3,4,6,8,12,12a-hexahydro-2H-pyrido[1',2':4,5]pyrazino[2,1-b][1,3]oxazine-9-carboxamide, DNA (25-MER), DNA (27-MER), ... Authors: Shan, Z.L, Passos, D.O, Strutzenberg, T.S, Li, M, Lyumkis, D. Deposit date: 2022-12-27 Release date: 2023-08-09 Last modified: 2024-06-19 Method: ELECTRON MICROSCOPY (2.8 Å) Cite: Mechanisms of HIV-1 integrase resistance to dolutegravir and potent inhibition of drug-resistant variants. Sci Adv, 9, 2023
8FNG	Structure of G140A HIV-1 intasome with Dolutegravir bound Descriptor: (4R,12aS)-N-(2,4-difluorobenzyl)-7-hydroxy-4-methyl-6,8-dioxo-3,4,6,8,12,12a-hexahydro-2H-pyrido[1',2':4,5]pyrazino[2,1-b][1,3]oxazine-9-carboxamide, DNA (25-MER), DNA (27-MER), ... Authors: Shan, Z.L, Passos, D.O, Strutzenberg, T.S, Li, M, Lyumkis, D. Deposit date: 2022-12-27 Release date: 2023-08-09 Last modified: 2025-03-26 Method: ELECTRON MICROSCOPY (2.2 Å) Cite: Mechanisms of HIV-1 integrase resistance to dolutegravir and potent inhibition of drug-resistant variants. Sci Adv, 9, 2023
8FNM	Structure of G140A/Q148K HIV-1 intasome with Dolutegravir bound Descriptor: (4R,12aS)-N-(2,4-difluorobenzyl)-7-hydroxy-4-methyl-6,8-dioxo-3,4,6,8,12,12a-hexahydro-2H-pyrido[1',2':4,5]pyrazino[2,1-b][1,3]oxazine-9-carboxamide, DNA (25-MER), DNA (27-MER), ... Authors: Shan, Z.L, Passos, D.O, Strutzenberg, T.S, Li, M, Lyumkis, D. Deposit date: 2022-12-27 Release date: 2023-08-09 Last modified: 2025-03-26 Method: ELECTRON MICROSCOPY (2.8 Å) Cite: Mechanisms of HIV-1 integrase resistance to dolutegravir and potent inhibition of drug-resistant variants. Sci Adv, 9, 2023
8FNQ	Structure of E138K/G140A/Q148K HIV-1 intasome with 4d bound Descriptor: 4-amino-N-[(2,4-difluorophenyl)methyl]-1-hydroxy-6-(6-hydroxyhexyl)-2-oxo-1,2-dihydro-1,8-naphthyridine-3-carboxamide, DNA (25-MER), DNA (27-MER), ... Authors: Shan, Z.L, Passos, D.O, Strutzenberg, T.S, Li, M, Lyumkis, D. Deposit date: 2022-12-28 Release date: 2023-08-09 Last modified: 2024-06-19 Method: ELECTRON MICROSCOPY (2.8 Å) Cite: Mechanisms of HIV-1 integrase resistance to dolutegravir and potent inhibition of drug-resistant variants. Sci Adv, 9, 2023
8FND	Structure of E138K HIV-1 intasome with Dolutegravir bound Descriptor: (4R,12aS)-N-(2,4-difluorobenzyl)-7-hydroxy-4-methyl-6,8-dioxo-3,4,6,8,12,12a-hexahydro-2H-pyrido[1',2':4,5]pyrazino[2,1-b][1,3]oxazine-9-carboxamide, DNA (25-MER), DNA (27-MER), ... Authors: Shan, Z.L, Passos, D.O, Strutzenberg, T.S, Li, M, Lyumkis, D. Deposit date: 2022-12-27 Release date: 2023-08-09 Last modified: 2024-10-23 Method: ELECTRON MICROSCOPY (3 Å) Cite: Mechanisms of HIV-1 integrase resistance to dolutegravir and potent inhibition of drug-resistant variants. Sci Adv, 9, 2023
8FNO	Structure of E138K/G140A/Q148R HIV-1 intasome with Dolutegravir bound Descriptor: (4R,12aS)-N-(2,4-difluorobenzyl)-7-hydroxy-4-methyl-6,8-dioxo-3,4,6,8,12,12a-hexahydro-2H-pyrido[1',2':4,5]pyrazino[2,1-b][1,3]oxazine-9-carboxamide, DNA (25-MER), DNA (27-MER), ... Authors: Shan, Z.L, Passos, D.O, Strutzenberg, T.S, Li, M, Lyumkis, D. Deposit date: 2022-12-28 Release date: 2023-08-09 Last modified: 2025-03-26 Method: ELECTRON MICROSCOPY (2.46 Å) Cite: Mechanisms of HIV-1 integrase resistance to dolutegravir and potent inhibition of drug-resistant variants. Sci Adv, 9, 2023
8FNH	Structure of Q148K HIV-1 intasome with Dolutegravir bound Descriptor: (4R,12aS)-N-(2,4-difluorobenzyl)-7-hydroxy-4-methyl-6,8-dioxo-3,4,6,8,12,12a-hexahydro-2H-pyrido[1',2':4,5]pyrazino[2,1-b][1,3]oxazine-9-carboxamide, DNA (25-MER), DNA (27-MER), ... Authors: Shan, Z.L, Passos, D.O, Strutzenberg, T.S, Li, M, Lyumkis, D. Deposit date: 2022-12-27 Release date: 2023-08-09 Last modified: 2024-11-20 Method: ELECTRON MICROSCOPY (2.5 Å) Cite: Mechanisms of HIV-1 integrase resistance to dolutegravir and potent inhibition of drug-resistant variants. Sci Adv, 9, 2023
8FNP	Structure of E138K/G140S/Q148H HIV-1 intasome with Dolutegravir bound Descriptor: (4R,12aS)-N-(2,4-difluorobenzyl)-7-hydroxy-4-methyl-6,8-dioxo-3,4,6,8,12,12a-hexahydro-2H-pyrido[1',2':4,5]pyrazino[2,1-b][1,3]oxazine-9-carboxamide, DNA (25-MER), DNA (27-MER), ... Authors: Shan, Z.L, Passos, D.O, Strutzenberg, T.S, Li, M, Lyumkis, D. Deposit date: 2022-12-28 Release date: 2023-08-09 Last modified: 2024-06-19 Method: ELECTRON MICROSCOPY (2.2 Å) Cite: Mechanisms of HIV-1 integrase resistance to dolutegravir and potent inhibition of drug-resistant variants. Sci Adv, 9, 2023

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