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4APA
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BU of 4apa by Molmil
Crystal structure of Mycobacterium tuberculosis fumarase (Rv1098c) S318A in apo form
Descriptor: FUMARATE HYDRATASE CLASS II
Authors:Bellinzoni, M, Haouz, A, Mechaly, A.E, Alzari, P.M.
Deposit date:2012-03-31
Release date:2012-04-25
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Conformational Changes Upon Ligand Binding in the Essential Class II Fumarase Rv1098C from Mycobacterium Tuberculosis.
FEBS Lett., 586, 2012
2X4R
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BU of 2x4r by Molmil
Crystal structure of MHC CLass I HLA-A2.1 bound to Cytomegalovirus (CMV) pp65 epitope
Descriptor: 65 KDA PHOSPHOPROTEIN, BETA-2-MICROGLOBULIN, GLYCEROL, ...
Authors:Celie, P.H.N, Toebes, M, Rodenko, B, Ovaa, H, Perrakis, A, Schumacher, T.N.M.
Deposit date:2010-02-02
Release date:2010-03-02
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Uv-Induced Ligand Exchange in Mhc Class I Protein Crystals.
J.Am.Chem.Soc., 131, 2009
3QK6
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BU of 3qk6 by Molmil
Crystal structure of Escherichia coli PhnD
Descriptor: PhnD, subunit of alkylphosphonate ABC transporter, UNKNOWN LIGAND
Authors:Alicea, I, Schreiter, E.R.
Deposit date:2011-01-31
Release date:2011-10-12
Last modified:2011-12-21
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of the Escherichia coli Phosphonate Binding Protein PhnD and Rationally Optimized Phosphonate Biosensors.
J.Mol.Biol., 414, 2011
1JX9
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BU of 1jx9 by Molmil
Penicillin Acylase, mutant
Descriptor: CALCIUM ION, penicillin G acylase alpha subunit, penicillin G acylase beta subunit
Authors:Hensgens, C.M.H, Keizer, E, Snijder, H.J, Dijkstra, B.W.
Deposit date:2001-09-06
Release date:2003-09-02
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Structural and kinetic studies on ligand binding in wild-type and active-site mutants of penicillin acylase.
Protein Eng.Des.Sel., 17, 2004
5V3N
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BU of 5v3n by Molmil
Structure of S. cerevisiae Ulp2-Tof2-Csm1 complex
Descriptor: Monopolin complex subunit CSM1, Ulp2p,Topoisomerase 1-associated factor 2 chimera
Authors:SIngh, N, Corbett, K.D.
Deposit date:2017-03-07
Release date:2017-05-17
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Recruitment of a SUMO isopeptidase to rDNA stabilizes silencing complexes by opposing SUMO targeted ubiquitin ligase activity.
Genes Dev., 31, 2017
2X4S
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BU of 2x4s by Molmil
Crystal structure of MHC CLass I HLA-A2.1 bound to a peptide representing the epitope of the H5N1 (Avian Flu) Nucleoprotein
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, BETA-2-MICROGLOBULIN, GLYCEROL, ...
Authors:Celie, P.H.N, Toebes, M, Rodenko, B, Ovaa, H, Perrakis, A, Schumacher, T.N.M.
Deposit date:2010-02-02
Release date:2010-03-02
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Uv-Induced Ligand Exchange in Mhc Class I Protein Crystals
J.Am.Chem.Soc., 131, 2009
1IPG
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BU of 1ipg by Molmil
SOLUTION STRUCTURE OF THE PB1 DOMAIN OF BEM1P
Descriptor: BEM1 PROTEIN
Authors:Terasawa, H, Noda, Y, Ito, T, Hatanaka, H, Ichikawa, S, Ogura, K, Sumimoto, H, Inagaki, F.
Deposit date:2001-05-14
Release date:2001-08-15
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Structure and ligand recognition of the PB1 domain: a novel protein module binding to the PC motif.
EMBO J., 20, 2001
3OXJ
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BU of 3oxj by Molmil
crystal structure of glycine riboswitch, soaked in Ba2+
Descriptor: BARIUM ION, GLYCINE, MAGNESIUM ION, ...
Authors:Huang, L, Serganov, A, Patel, D.J.
Deposit date:2010-09-21
Release date:2010-12-29
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural insights into ligand recognition by a sensing domain of the cooperative glycine riboswitch.
Mol.Cell, 40, 2010
3OXB
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BU of 3oxb by Molmil
Crystal structure of glycine riboswitch with single mutation
Descriptor: Domain II of glycine riboswitch, MAGNESIUM ION
Authors:Huang, L, Serganov, A, Patel, D.J.
Deposit date:2010-09-21
Release date:2010-12-29
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.947 Å)
Cite:Structural insights into ligand recognition by a sensing domain of the cooperative glycine riboswitch.
Mol.Cell, 40, 2010
4APB
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BU of 4apb by Molmil
Crystal structure of Mycobacterium tuberculosis fumarase (Rv1098c) S318C in complex with fumarate
Descriptor: CALCIUM ION, FUMARATE HYDRATASE CLASS II, FUMARIC ACID
Authors:Bellinzoni, M, Haouz, A, Mechaly, A.E, Alzari, P.M.
Deposit date:2012-03-31
Release date:2012-04-25
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Conformational Changes Upon Ligand Binding in the Essential Class II Fumarase Rv1098C from Mycobacterium Tuberculosis.
FEBS Lett., 586, 2012
3OXM
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BU of 3oxm by Molmil
crystal structure of glycine riboswitch, Tl-Acetate soaked
Descriptor: GLYCINE, MAGNESIUM ION, THALLIUM (I) ION, ...
Authors:Huang, L, Serganov, A, Patel, D.J.
Deposit date:2010-09-21
Release date:2010-12-29
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Structural insights into ligand recognition by a sensing domain of the cooperative glycine riboswitch.
Mol.Cell, 40, 2010
2X4O
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BU of 2x4o by Molmil
Crystal structure of MHC CLass I HLA-A2.1 bound to HIV-1 envelope peptide env120-128
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, BETA-2-MICROGLOBULIN, ENVELOPE GLYCOPROTEIN GP160, ...
Authors:Celie, P.H.N, Toebes, M, Rodenko, B, Ovaa, H, Perrakis, A, Schumacher, T.N.M.
Deposit date:2010-02-02
Release date:2010-03-02
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Uv-Induced Ligand Exchange in Mhc Class I Protein Crystals.
J.Am.Chem.Soc., 131, 2009
1TWO
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BU of 1two by Molmil
NMR structure of the pheromone binding protein from Antheraea polyphemus at acidic pH
Descriptor: Pheromone-binding protein
Authors:Mohanty, S, Zubkov, S.
Deposit date:2004-07-01
Release date:2005-10-25
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:Structural Consequences of the pH-induced Conformational Switch in A.polyphemus Pheromone-binding Protein: Mechanisms of Ligand Release
J.Mol.Biol., 354, 2005
1HEX
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BU of 1hex by Molmil
STRUCTURE OF 3-ISOPROPYLMALATE DEHYDROGENASE IN COMPLEX WITH NAD+: LIGAND-INDUCED LOOP-CLOSING AND MECHANISM FOR COFACTOR SPECIFICITY
Descriptor: 3-ISOPROPYLMALATE DEHYDROGENASE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Hurley, J.H.
Deposit date:1994-09-09
Release date:1994-12-20
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of 3-isopropylmalate dehydrogenase in complex with NAD+: ligand-induced loop closing and mechanism for cofactor specificity.
Structure, 2, 1994
4ADL
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BU of 4adl by Molmil
Crystal structures of Rv1098c in complex with malate
Descriptor: (2S)-2-hydroxybutanedioic acid, FUMARATE HYDRATASE CLASS II
Authors:Mechaly, A.E, Haouz, A, Miras, I, Weber, P, Shepard, W, Cole, S, Alzari, P.M, Bellinzoni, M.
Deposit date:2011-12-26
Release date:2012-04-25
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Conformational Changes Upon Ligand Binding in the Essential Class II Fumarase Rv1098C from Mycobacterium Tuberculosis.
FEBS Lett., 586, 2012
3OWZ
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BU of 3owz by Molmil
Crystal structure of glycine riboswitch, soaked in Iridium
Descriptor: Domain II of glycine riboswitch, GLYCINE, IRIDIUM HEXAMMINE ION, ...
Authors:Huang, L, Serganov, A, Patel, D.J.
Deposit date:2010-09-20
Release date:2010-12-29
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.949 Å)
Cite:Structural insights into ligand recognition by a sensing domain of the cooperative glycine riboswitch.
Mol.Cell, 40, 2010
3BQR
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BU of 3bqr by Molmil
Crystal structure of human death associated protein kinase 3 (DAPK3) in complex with an imidazo-pyridazine ligand
Descriptor: 4-(6-{[(1R)-1-(hydroxymethyl)propyl]amino}imidazo[1,2-b]pyridazin-3-yl)benzoic acid, Death-associated protein kinase 3, GLYCEROL, ...
Authors:Filippakopoulos, P, Rellos, P, Fedorov, O, Niesen, F, Pike, A.C.W, Pilka, E.S, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Weigelt, J, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2007-12-20
Release date:2008-02-26
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal Structure of Human Death Associated Protein Kinase 3 (DAPK3) in Complex with an Imidazo-Pyridazine Ligand.
To be Published
4ADM
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BU of 4adm by Molmil
Crystal structure of Rv1098c in complex with meso-tartrate
Descriptor: FUMARATE HYDRATASE CLASS II, GLYCEROL, S,R MESO-TARTARIC ACID
Authors:Mechaly, A.E, Haouz, A, Miras, I, Weber, P, Shepard, W, Cole, S, Alzari, P.M, Bellinzoni, M.
Deposit date:2011-12-27
Release date:2012-04-25
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Conformational Changes Upon Ligand Binding in the Essential Class II Fumarase Rv1098C from Mycobacterium Tuberculosis.
FEBS Lett., 586, 2012
5OTU
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BU of 5otu by Molmil
Extracellular domain of GLP-1 receptor in complex with GLP-1 variant Ala8Hcs/Thr11Hcs
Descriptor: Glucagon, Glucagon-like peptide 1 receptor
Authors:Mortensen, S.
Deposit date:2017-08-22
Release date:2018-07-04
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:alpha-Helix or beta-Turn? An Investigation into N-Terminally Constrained Analogues of Glucagon-like Peptide 1 (GLP-1) and Exendin-4.
Biochemistry, 57, 2018
2Y3E
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BU of 2y3e by Molmil
Traptavidin, apo-form
Descriptor: GLYCEROL, STREPTAVIDIN
Authors:Chivers, C.E, Koner, A.L, Lowe, E.D, Howarth, M.
Deposit date:2010-12-20
Release date:2011-02-16
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.449 Å)
Cite:How the Biotin-Streptavidin Interaction Was Made Even Stronger: Investigation Via Crystallography and a Chimeric Tetramer.
Biochem.J., 435, 2011
1VE9
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BU of 1ve9 by Molmil
Porcine kidney D-amino acid oxidase
Descriptor: BENZOIC ACID, D-amino acid oxidase, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Mizutani, H, Miyahara, I, Hirotsu, K, Nishina, Y, Shiga, K, Setoyama, C, Miura, R.
Deposit date:2004-03-29
Release date:2004-04-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Three-dimensional structure of porcine kidney D-amino acid oxidase at 3.0 A resolution.
J.Biochem., 120, 1996
2D1N
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BU of 2d1n by Molmil
Collagenase-3 (MMP-13) complexed to a hydroxamic acid inhibitor
Descriptor: CALCIUM ION, Collagenase 3, SM-25453, ...
Authors:Kohno, T, Hochigai, H, Yamashita, E, Tsukihara, T, Kanaoka, M.
Deposit date:2005-08-29
Release date:2006-06-27
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.37 Å)
Cite:Crystal structures of the catalytic domain of human stromelysin-1 (MMP-3) and collagenase-3 (MMP-13) with a hydroxamic acid inhibitor SM-25453
Biochem.Biophys.Res.Commun., 344, 2006
3PE6
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BU of 3pe6 by Molmil
Crystal Structure of a soluble form of human MGLL in complex with an inhibitor
Descriptor: (2-cyclohexyl-1,3-benzoxazol-6-yl){3-[4-(pyrimidin-2-yl)piperazin-1-yl]azetidin-1-yl}methanone, Monoglyceride lipase
Authors:Schubert, C, Schalk-Hih, C.
Deposit date:2010-10-25
Release date:2011-03-02
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Crystal structure of a soluble form of human monoglyceride lipase in complex with an inhibitor at 1.35 A resolution.
Protein Sci., 20, 2011
3U2Q
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BU of 3u2q by Molmil
EF-Tu (Escherichia coli) in complex with NVP-LFF571
Descriptor: Elongation factor Tu 1, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Palestrant, D.J.
Deposit date:2011-10-04
Release date:2012-05-02
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Discovery of LFF571: an investigational agent for Clostridium difficile infection.
J.Med.Chem., 55, 2012
1IUK
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BU of 1iuk by Molmil
The structure of native ID.343 from Thermus thermophilus
Descriptor: hypothetical protein TT1466
Authors:Wada, T, Shirouzu, M, Park, S.-Y, Tame, J.R, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2002-03-05
Release date:2003-07-15
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure of a conserved CoA-binding protein synthesized by a cell-free system.
Acta Crystallogr.,Sect.D, 59, 2003

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