Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3EXA
DownloadVisualize
BU of 3exa by Molmil
Crystal structure of the full-length tRNA isopentenylpyrophosphate transferase (BH2366) from Bacillus halodurans, Northeast Structural Genomics Consortium target BhR41.
Descriptor: tRNA delta(2)-isopentenylpyrophosphate transferase
Authors:Forouhar, F, Abashidze, M, Neely, H, Seetharaman, J, Shastry, R, Janjua, H, Cunningham, K, Ma, L.-C, Xiao, R, Liu, J, Baran, M.C, Acton, T.B, Rost, B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2008-10-16
Release date:2008-11-11
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of the full-length tRNA isopentenylpyrophosphate transferase (BH2366) from Bacillus halodurans, Northeast Structural Genomics Consortium target BhR41.
To be Published
5W6W
DownloadVisualize
BU of 5w6w by Molmil
Designing Higher Resolution Self-Assembled 3D DNA Crystals via Strand Terminus Modifications
Descriptor: DNA (5'-D(*GP*AP*GP*CP*AP*GP*CP*CP*TP*GP*TP*AP*CP*GP*GP*AP*CP*AP*TP*CP*A)-3'), DNA (5'-D(P*CP*CP*GP*TP*AP*CP*A)-3'), DNA (5'-D(P*CP*TP*GP*AP*TP*GP*T)-3'), ...
Authors:Hernandez, C, Birktoft, J.J, Seeman, N.C.
Deposit date:2017-06-17
Release date:2018-06-27
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.06 Å)
Cite:Designing Higher Resolution Self-Assembled 3D DNA Crystals via Strand Terminus Modifications
To Be Published
5VQI
DownloadVisualize
BU of 5vqi by Molmil
Nuclear transport of the Neurospora crassa NIT2 transcription factor is mediated by Importin-alpha
Descriptor: Importin subunit alpha, Nuclear localization sequence of NIT2 transcription factor (NIT2-NLS)
Authors:Bernardes, N.E, Fontes, M.R.M.
Deposit date:2017-05-09
Release date:2017-11-01
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.501 Å)
Cite:Nuclear transport of the Neurospora crassa NIT-2 transcription factor is mediated by importin-alpha.
Biochem. J., 474, 2017
1ORM
DownloadVisualize
BU of 1orm by Molmil
NMR FOLD OF THE OUTER MEMBRANE PROTEIN OMPX IN DHPC MICELLES
Descriptor: Outer membrane protein X
Authors:Fernandez, C, Adeishvili, K, Wuthrich, K.
Deposit date:2003-03-14
Release date:2003-04-22
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:TRANSVERSE RELAXATION-OPTIMIZED NMR SPECTROSCOPY WITH THE OUTER MEMBRANE PROTEIN OMPX IN DIHEXANOYL PHOSPHATIDYLCHOLINE MICELLES
Proc.Natl.Acad.Sci.USA, 98, 2001
2FLH
DownloadVisualize
BU of 2flh by Molmil
Crystal structure of cytokinin-specific binding protein from mung bean in complex with cytokinin
Descriptor: (2E)-2-methyl-4-(9H-purin-6-ylamino)but-2-en-1-ol, SODIUM ION, cytokinin-specific binding protein
Authors:Pasternak, O, Bujacz, G.D, Sikorski, M.M, Jaskolski, M.
Deposit date:2006-01-06
Release date:2006-11-21
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Crystal Structure of Vigna radiata Cytokinin-Specific Binding Protein in Complex with Zeatin.
Plant Cell, 18, 2006
6ECA
DownloadVisualize
BU of 6eca by Molmil
Lactobacillus rhamnosus Beta-glucuronidase
Descriptor: Beta-glucuronidase, CHLORIDE ION, GLYCEROL
Authors:Biernat, K.A, Pellock, S.J, Bhatt, A.P, Bivins, M.M, Walton, W.G, Tran, B.N.T, Wei, L, Snider, M.C, Cesmat, A.P, Tripathy, A, Erie, D.A, Redinbo, M.R.R.
Deposit date:2018-08-07
Release date:2019-02-13
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.853 Å)
Cite:Structure, function, and inhibition of drug reactivating human gut microbial beta-glucuronidases.
Sci Rep, 9, 2019
6ED1
DownloadVisualize
BU of 6ed1 by Molmil
Bacteroides dorei Beta-glucuronidase
Descriptor: Glycosyl hydrolase family 2, sugar binding domain protein, SODIUM ION
Authors:Biernat, K.A, Redinbo, M.R.
Deposit date:2018-08-08
Release date:2019-02-13
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure, function, and inhibition of drug reactivating human gut microbial beta-glucuronidases.
Sci Rep, 9, 2019
6F1T
DownloadVisualize
BU of 6f1t by Molmil
Cryo-EM structure of two dynein tail domains bound to dynactin and BICDR1
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ARP1 actin related protein 1 homolog A, ...
Authors:Urnavicius, L, Lau, C.K, Elshenawy, M.M, Morales-Rios, E, Motz, C, Yildiz, A, Carter, A.P.
Deposit date:2017-11-23
Release date:2018-01-17
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Cryo-EM shows how dynactin recruits two dyneins for faster movement.
Nature, 554, 2018
6F3A
DownloadVisualize
BU of 6f3a by Molmil
Cryo-EM structure of a single dynein tail domain bound to dynactin and BICD2N
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ARP1 actin related protein 1 homolog A, ...
Authors:Urnavicius, L, Lau, C.K, Elshenawy, M.M, Morales-Rios, E, Motz, C, Yildiz, A, Carter, A.P.
Deposit date:2017-11-28
Release date:2018-01-17
Last modified:2019-12-11
Method:ELECTRON MICROSCOPY (8.2 Å)
Cite:Cryo-EM shows how dynactin recruits two dyneins for faster movement.
Nature, 554, 2018
3SLJ
DownloadVisualize
BU of 3slj by Molmil
Pre-cleavage Structure of the Autotransporter EspP - N1023A mutant
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, Serine protease espP
Authors:Barnard, T.B, Noinaj, N, Easley, N.C, Kuszak, A.J, Buchanan, S.K.
Deposit date:2011-06-24
Release date:2011-11-16
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.481 Å)
Cite:Molecular basis for the activation of a catalytic asparagine residue in a self-cleaving bacterial autotransporter.
J.Mol.Biol., 415, 2012
6F1Y
DownloadVisualize
BU of 6f1y by Molmil
Dynein light intermediate chain region of the dynein tail/dynactin/BICDR1 complex
Descriptor: Cytoplasmic dynein 1 heavy chain 1,Dynein heavy chain, Cytoplasmic dynein 1 light intermediate chain 2
Authors:Urnavicius, L, Lau, C.K, Elshenawy, M.M, Morales-Rios, E, Motz, C, Yildiz, A, Carter, A.P.
Deposit date:2017-11-23
Release date:2018-01-17
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Cryo-EM shows how dynactin recruits two dyneins for faster movement.
Nature, 554, 2018
1BR0
DownloadVisualize
BU of 1br0 by Molmil
THREE DIMENSIONAL STRUCTURE OF THE N-TERMINAL DOMAIN OF SYNTAXIN 1A
Descriptor: PROTEIN (SYNTAXIN 1-A)
Authors:Fernandez, I, Ubach, J, Dubulova, I, Zhang, X, Sudhof, T.C, Rizo, J.
Deposit date:1998-08-25
Release date:1998-09-02
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Three-dimensional structure of an evolutionarily conserved N-terminal domain of syntaxin 1A.
Cell(Cambridge,Mass.), 94, 1998
6F1V
DownloadVisualize
BU of 6f1v by Molmil
C terminal region of the dynein heavy chains in the dynein tail/dynactin/BICDR1 complex
Descriptor: Cytoplasmic dynein 1 heavy chain 1
Authors:Urnavicius, L, Lau, C.K, Elshenawy, M.M, Morales-Rios, E, Motz, C, Yildiz, A, Carter, A.P.
Deposit date:2017-11-23
Release date:2018-01-17
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Cryo-EM shows how dynactin recruits two dyneins for faster movement.
Nature, 554, 2018
6F1U
DownloadVisualize
BU of 6f1u by Molmil
N terminal region of dynein tail domains in complex with dynactin filament and BICDR-1
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ARP1 actin related protein 1 homolog A, BICD family-like cargo adapter 1, ...
Authors:Urnavicius, L, Lau, C.K, Elshenawy, M.M, Morales-Rios, E, Motz, C, Yildiz, A, Carter, A.P.
Deposit date:2017-11-23
Release date:2018-01-17
Last modified:2019-12-11
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Cryo-EM shows how dynactin recruits two dyneins for faster movement.
Nature, 554, 2018
6FAM
DownloadVisualize
BU of 6fam by Molmil
Structure of the GH99 endo-alpha-mannanase from Bacteroides xylanisolvens in complex with mannose-alpha-1,3-2-aminodeoxymannojirimycin
Descriptor: ACETATE ION, Glycosyl hydrolase family 71, alpha-D-mannopyranose, ...
Authors:Fernandes, P.Z, Petricevic, M, Sobala, L.F, Davies, G.J, Williams, S.J.
Deposit date:2017-12-15
Release date:2018-03-21
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.13 Å)
Cite:Exploration of Strategies for Mechanism-Based Inhibitor Design for Family GH99 endo-alpha-1,2-Mannanases.
Chemistry, 24, 2018
6F1Z
DownloadVisualize
BU of 6f1z by Molmil
Roadblock-1 region of the dynein tail/dynactin/BICDR1 complex
Descriptor: Cytoplasmic dynein 1 intermediate chain 2, Dynein light chain roadblock-type 1
Authors:Urnavicius, L, Lau, C.K, Elshenawy, M.M, Morales-Rios, E, Motz, C, Yildiz, A, Carter, A.P.
Deposit date:2017-11-23
Release date:2018-01-17
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Cryo-EM shows how dynactin recruits two dyneins for faster movement.
Nature, 554, 2018
6VJF
DownloadVisualize
BU of 6vjf by Molmil
The P-Loop K to A mutation of C. therm Vps1 GTPase-BSE
Descriptor: MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER, Putative sorting protein Vps1
Authors:Tornabene, B.A, Varlakhanova, N.V, Chappie, J.S, Ford, M.G.J.
Deposit date:2020-01-15
Release date:2020-02-19
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.472 Å)
Cite:Structural and functional characterization of the dominant negative P-loop lysine mutation in the dynamin superfamily protein Vps1.
Protein Sci., 29, 2020
6FAR
DownloadVisualize
BU of 6far by Molmil
Structure of the GH99 endo-alpha-mannanase from Bacteroides xylanisolvens in complex with mannose-alpha-1,3-mannoimidazole
Descriptor: (5R,6R,7S,8R)-5-(HYDROXYMETHYL)-5,6,7,8-TETRAHYDROIMIDAZO[1,2-A]PYRIDINE-6,7,8-TRIOL, Glycosyl hydrolase family 71, alpha-D-mannopyranose
Authors:Fernandes, P.Z, Petricevic, M, Sobala, L.F, Davies, G.J, Williams, S.J.
Deposit date:2017-12-16
Release date:2018-03-21
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Exploration of Strategies for Mechanism-Based Inhibitor Design for Family GH99 endo-alpha-1,2-Mannanases.
Chemistry, 24, 2018
8OVN
DownloadVisualize
BU of 8ovn by Molmil
X-ray structure of the SF-iGluSnFR-S72A
Descriptor: CITRIC ACID, Putative periplasmic binding transport protein,Green fluorescent protein
Authors:Tarnawski, M, Hellweg, L, Bergner, A, Hiblot, J, Leippe, P, Johnsson, K.
Deposit date:2023-04-26
Release date:2023-05-17
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:X-ray structure of the SF-iGluSnFR-S72A
To Be Published
8OVO
DownloadVisualize
BU of 8ovo by Molmil
X-ray structure of the SF-iGluSnFR-S72A in complex with L-aspartate
Descriptor: ASPARTIC ACID, Putative periplasmic binding transport protein,Green fluorescent protein
Authors:Tarnawski, M, Hellweg, L, Bergner, A, Hiblot, J, Leippe, P, Johnsson, K.
Deposit date:2023-04-26
Release date:2023-05-17
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:X-ray structure of the SF-iGluSnFR-S72A in complex with L-aspartate
To Be Published
8OVP
DownloadVisualize
BU of 8ovp by Molmil
X-ray structure of the iAspSnFR in complex with L-aspartate
Descriptor: ACETATE ION, ASPARTIC ACID, MAGNESIUM ION, ...
Authors:Tarnawski, M, Hellweg, L, Bergner, A, Hiblot, J, Leippe, P, Johnsson, K.
Deposit date:2023-04-26
Release date:2023-05-17
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:X-ray structure of the SF-iAspSnFR in complex with L-aspartate
To Be Published
6EC6
DownloadVisualize
BU of 6ec6 by Molmil
Ruminococcus gnavus Beta-glucuronidase
Descriptor: Beta-glucuronidase, CHLORIDE ION, GLYCEROL
Authors:Biernat, K.A, Redinbo, M.R.
Deposit date:2018-08-07
Release date:2019-02-13
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Structure, function, and inhibition of drug reactivating human gut microbial beta-glucuronidases.
Sci Rep, 9, 2019
3SLO
DownloadVisualize
BU of 3slo by Molmil
Pre-cleavage Structure of the Autotransporter EspP - N1023D mutant
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, Serine protease espP
Authors:Barnard, T.B, Noinaj, N, Easley, N.C, Kuszak, A.J, Buchanan, S.K.
Deposit date:2011-06-24
Release date:2011-11-16
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.52 Å)
Cite:Molecular basis for the activation of a catalytic asparagine residue in a self-cleaving bacterial autotransporter.
J.Mol.Biol., 415, 2012
8SAM
DownloadVisualize
BU of 8sam by Molmil
Crystal structure of class III lanthipeptide synthetase LP-GS-ThurKC in complex with ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, Class III lanthipeptide, ...
Authors:Hernandez Garcia, A, Nair, S.K.
Deposit date:2023-04-01
Release date:2023-10-11
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structure and Function of a Class III Metal-Independent Lanthipeptide Synthetase.
Acs Cent.Sci., 9, 2023
8SAP
DownloadVisualize
BU of 8sap by Molmil
Crystal structure of class III lanthipeptide synthetase ThurKC
Descriptor: Class III lanthionine synthetase LanKC
Authors:Hernandez Garcia, A, Nair, S.K.
Deposit date:2023-04-01
Release date:2023-10-11
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.52 Å)
Cite:Structure and Function of a Class III Metal-Independent Lanthipeptide Synthetase.
Acs Cent.Sci., 9, 2023

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon