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1SGC
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BU of 1sgc by Molmil
THE 1.8 ANGSTROMS STRUCTURE OF THE COMPLEX BETWEEN CHYMOSTATIN AND STREPTOMYCES GRISEUS PROTEASE A. A MODEL FOR SERINE PROTEASE CATALYTIC TETRAHEDRAL INTERMEDIATES
Descriptor: CHYMOSTATIN A, PROTEINASE A
Authors:Delbaere, L.T.J, Brayer, G.D.
Deposit date:1986-04-18
Release date:1986-07-14
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The 1.8 A structure of the complex between chymostatin and Streptomyces griseus protease A. A model for serine protease catalytic tetrahedral intermediates.
J.Mol.Biol., 183, 1985
4JY8
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BU of 4jy8 by Molmil
X-ray snapshots of possible intermediates in the time course of synthesis and degradation of protein-bound Fe4S4 clusters
Descriptor: CHLORIDE ION, FEFE-HYDROGENASE MATURASE, HYDROSULFURIC ACID, ...
Authors:Nicolet, Y, Rohac, R, Martin, L, Fontecilla-Camps, J.C.
Deposit date:2013-03-29
Release date:2013-05-01
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.901 Å)
Cite:X-ray snapshots of possible intermediates in the time course of synthesis and degradation of protein-bound Fe4S4 clusters.
Proc.Natl.Acad.Sci.USA, 110, 2013
4JYF
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BU of 4jyf by Molmil
X-ray snapshots of possible intermediates in the time course of synthesis and degradation of protein-bound Fe4S4 clusters.
Descriptor: CARBONATE ION, CHAPSO, CHLORIDE ION, ...
Authors:Nicolet, Y, Rohac, R, Martin, L, Fontecilla-Camps, J.C.
Deposit date:2013-03-29
Release date:2013-05-01
Last modified:2013-05-15
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:X-ray snapshots of possible intermediates in the time course of synthesis and degradation of protein-bound Fe4S4 clusters.
Proc.Natl.Acad.Sci.USA, 110, 2013
4JYE
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BU of 4jye by Molmil
X-ray snapshots of possible intermediates in the time course of synthesis and degradation of protein-bound Fe4S4 clusters.
Descriptor: BROMIDE ION, Biotin synthetase, putative, ...
Authors:Nicolet, Y, Rohac, R, Martin, L, Fontecilla-Camps, J.C.
Deposit date:2013-03-29
Release date:2013-05-01
Last modified:2013-05-15
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:X-ray snapshots of possible intermediates in the time course of synthesis and degradation of protein-bound Fe4S4 clusters.
Proc.Natl.Acad.Sci.USA, 110, 2013
4JYD
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BU of 4jyd by Molmil
X-ray snapshots of possible intermediates in the time course of synthesis and degradation of protein-bound Fe4S4 clusters.
Descriptor: 3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMONIO]-1-PROPANESULFONATE, BROMIDE ION, CHAPSO, ...
Authors:Nicolet, Y, Rohac, R, Martin, L, Fontecilla-Camps, J.C.
Deposit date:2013-03-29
Release date:2013-05-01
Last modified:2013-05-15
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:X-ray snapshots of possible intermediates in the time course of synthesis and degradation of protein-bound Fe4S4 clusters.
Proc.Natl.Acad.Sci.USA, 110, 2013
2CUT
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BU of 2cut by Molmil
CUTINASE, A LIPOLYTIC ENZYME WITH A PREFORMED OXYANION HOLE
Descriptor: CUTINASE, DIETHYL PHOSPHONATE
Authors:Martinez, C, Cambillau, C.
Deposit date:1994-06-03
Release date:1994-08-31
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Cutinase, a lipolytic enzyme with a preformed oxyanion hole.
Biochemistry, 33, 1994
5M8X
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BU of 5m8x by Molmil
PCE reductive dehalogenase from S. multivorans in complex with 2,4,5-trichlorophenol
Descriptor: 2,4,5-trichlorophenol, BENZAMIDINE, GLYCEROL, ...
Authors:Kunze, C, Bommer, M, Hagen, W.R, Uksa, M, Dobbek, H, Schubert, T, Diekert, G.
Deposit date:2016-10-30
Release date:2017-07-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.869 Å)
Cite:Cobamide-mediated enzymatic reductive dehalogenation via long-range electron transfer.
Nat Commun, 8, 2017
5MAA
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BU of 5maa by Molmil
PCE reductive dehalogenase from S. multivorans in complex with 3-bromophenol
Descriptor: 3-bromophenol, 5-Methoxybenzimidazolyl-norcobamide, BENZAMIDINE, ...
Authors:Kunze, C, Bommer, M, Hagen, W.R, Uksa, M, Dobbek, H, Schubert, T, Diekert, G.
Deposit date:2016-11-03
Release date:2017-07-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.686 Å)
Cite:Cobamide-mediated enzymatic reductive dehalogenation via long-range electron transfer.
Nat Commun, 8, 2017
5M8Z
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BU of 5m8z by Molmil
PCE reductive dehalogenase from S. multivorans in complex with 2,3-difluorophenol
Descriptor: 2,3-bis(fluoranyl)phenol, BENZAMIDINE, GLYCEROL, ...
Authors:Kunze, C, Bommer, M, Hagen, W.R, Uksa, M, Dobbek, H, Schubert, T, Diekert, G.
Deposit date:2016-10-30
Release date:2017-07-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.659 Å)
Cite:Cobamide-mediated enzymatic reductive dehalogenation via long-range electron transfer.
Nat Commun, 8, 2017
1O2K
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BU of 1o2k by Molmil
Elaborate Manifold of Short Hydrogen Bond Arrays Mediating Binding of Active Site-Directed Serine Protease Inhibitors
Descriptor: 2-{5-[AMINO(IMINIO)METHYL]-1H-BENZIMIDAZOL-2-YL}-6-ISOBUTOXYBENZENOLATE, BETA-TRYPSIN, CALCIUM ION, ...
Authors:Katz, B.A, Elrod, K, Verner, E, Mackman, R.L, Luong, C, Shrader, W, Sendzik, M, Spencer, J.R, Sprengeler, P.A, Kolesnikov, A, Tai, W.F, Hui, H, Breitenbucher, G, Allen, D, Janc, J.
Deposit date:2003-03-06
Release date:2003-05-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Elaborate Manifold of Short Hydrogen Bond Arrays Mediating Binding of Active Site-Directed Serine Protease Inhibitors
J.Mol.Biol., 329, 2003
1O2P
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BU of 1o2p by Molmil
Elaborate Manifold of Short Hydrogen Bond Arrays Mediating Binding of Active Site-Directed Serine Protease Inhibitors
Descriptor: 2-{5-[AMINO(IMINIO)METHYL]-6-CHLORO-1H-BENZIMIDAZOL-2-YL}-6-ISOBUTOXYBENZENOLATE, BETA-TRYPSIN, CALCIUM ION, ...
Authors:Katz, B.A, Elrod, K, Verner, E, Mackman, R.L, Luong, C, Shrader, W, Sendzik, M, Spencer, J.R, Sprengeler, P.A, Kolesnikov, A, Tai, W.F, Hui, H, Breitenbucher, G, Allen, D, Janc, J.
Deposit date:2003-03-06
Release date:2003-05-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Elaborate Manifold of Short Hydrogen Bond Arrays Mediating Binding of Active Site-Directed Serine Protease Inhibitors
J.Mol.Biol., 329, 2003
5M91
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BU of 5m91 by Molmil
PCE reductive dehalogenase from S. multivorans in complex with 2,6-dibromophenol
Descriptor: 2,6-bis(bromanyl)phenol, BENZAMIDINE, GLYCEROL, ...
Authors:Kunze, C, Bommer, M, Hagen, W.R, Uksa, M, Dobbek, H, Schubert, T, Diekert, G.
Deposit date:2016-10-31
Release date:2017-07-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.719 Å)
Cite:Cobamide-mediated enzymatic reductive dehalogenation via long-range electron transfer.
Nat Commun, 8, 2017
5M90
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BU of 5m90 by Molmil
PCE reductive dehalogenase from S. multivorans in complex with 3,4,5-trifluorophenol
Descriptor: 3,4,5-tris(fluoranyl)phenol, BENZAMIDINE, GLYCEROL, ...
Authors:Kunze, C, Bommer, M, Hagen, W.R, Uksa, M, Dobbek, H, Schubert, T, Diekert, G.
Deposit date:2016-10-31
Release date:2017-07-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.599 Å)
Cite:Cobamide-mediated enzymatic reductive dehalogenation via long-range electron transfer.
Nat Commun, 8, 2017
5MA0
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BU of 5ma0 by Molmil
PCE reductive dehalogenase from S. multivorans in complex with 2,6-dichlorophenol
Descriptor: 2,6-dichlorophenol, GLYCEROL, IRON/SULFUR CLUSTER, ...
Authors:Kunze, C, Bommer, M, Hagen, W.R, Uksa, M, Dobbek, H, Schubert, T, Diekert, G.
Deposit date:2016-11-02
Release date:2017-07-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Cobamide-mediated enzymatic reductive dehalogenation via long-range electron transfer.
Nat Commun, 8, 2017
1O2J
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BU of 1o2j by Molmil
Elaborate Manifold of Short Hydrogen Bond Arrays Mediating Binding of Active Site-Directed Serine Protease Inhibitors
Descriptor: 2-{5-[AMINO(IMINIO)METHYL]-1H-BENZIMIDAZOL-2-YL}-6-ISOBUTOXYBENZENOLATE, BETA-TRYPSIN, CALCIUM ION, ...
Authors:Katz, B.A, Elrod, K, Verner, E, Mackman, R.L, Luong, C, Shrader, W, Sendzik, M, Spencer, J.R, Sprengeler, P.A, Kolesnikov, A, Tai, W.F, Hui, H, Breitenbucher, G, Allen, D, Janc, J.
Deposit date:2003-03-06
Release date:2003-05-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Elaborate Manifold of Short Hydrogen Bond Arrays Mediating Binding of Active Site-Directed Serine Protease Inhibitors
J.Mol.Biol., 329, 2003
5MA1
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BU of 5ma1 by Molmil
PCE reductive dehalogenase from S. multivorans in complex with 2,4,6-trichlorophenol
Descriptor: 2,4,6-trichlorophenol, GLYCEROL, IRON/SULFUR CLUSTER, ...
Authors:Kunze, C, Bommer, M, Hagen, W.R, Uksa, M, Dobbek, H, Schubert, T, Diekert, G.
Deposit date:2016-11-02
Release date:2017-07-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.498 Å)
Cite:Cobamide-mediated enzymatic reductive dehalogenation via long-range electron transfer.
Nat Commun, 8, 2017
1O2H
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BU of 1o2h by Molmil
Elaborate Manifold of Short Hydrogen Bond Arrays Mediating Binding of Active Site-Directed Serine Protease Inhibitors
Descriptor: 2-{5-[AMINO(IMINIO)METHYL]-1H-INDOL-2-YL}-6-(CYCLOPENTYLOXY)BENZENOLATE, BETA-TRYPSIN, CALCIUM ION
Authors:Katz, B.A, Elrod, K, Verner, E, Mackman, R.L, Luong, C, Shrader, W, Sendzik, M, Spencer, J.R, Sprengeler, P.A, Kolesnikov, A, Tai, W.F, Hui, H, Breitenbucher, G, Allen, D, Janc, J.
Deposit date:2003-03-06
Release date:2003-05-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Elaborate Manifold of Short Hydrogen Bond Arrays Mediating Binding of Active Site-Directed Serine Protease Inhibitors
J.Mol.Biol., 329, 2003
1O2M
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BU of 1o2m by Molmil
Elaborate Manifold of Short Hydrogen Bond Arrays Mediating Binding of Active Site-Directed Serine Protease Inhibitors
Descriptor: 3-{5-[AMINO(IMINIO)METHYL]-6-CHLORO-1H-BENZIMIDAZOL-2-YL}-1,1'-BIPHENYL-2-OLATE, BETA-TRYPSIN, CALCIUM ION, ...
Authors:Katz, B.A, Elrod, K, Verner, E, Mackman, R.L, Luong, C, Shrader, W, Sendzik, M, Spencer, J.R, Sprengeler, P.A, Kolesnikov, A, Tai, W.F, Hui, H, Breitenbucher, G, Allen, D, Janc, J.
Deposit date:2003-03-06
Release date:2003-05-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Elaborate Manifold of Short Hydrogen Bond Arrays Mediating Binding of Active Site-Directed Serine Protease Inhibitors
J.Mol.Biol., 329, 2003
3JS3
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BU of 3js3 by Molmil
Crystal structure of type I 3-dehydroquinate dehydratase (aroD) from Clostridium difficile with covalent reaction intermediate
Descriptor: 3-AMINO-4,5-DIHYDROXY-CYCLOHEX-1-ENECARBOXYLATE, 3-dehydroquinate dehydratase
Authors:Minasov, G, Light, S.H, Shuvalova, L, Dubrovska, I, Winsor, J, Peterson, S.N, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2009-09-09
Release date:2009-09-22
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Insights into the mechanism of type I dehydroquinate dehydratases from structures of reaction intermediates.
J.Biol.Chem., 286, 2011
5M8Y
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BU of 5m8y by Molmil
PCE reductive dehalogenase from S. multivorans in complex with 3-chlorophenol
Descriptor: 3-CHLOROPHENOL, GLYCEROL, IRON/SULFUR CLUSTER, ...
Authors:Kunze, C, Bommer, M, Hagen, W.R, Uksa, M, Dobbek, H, Schubert, T, Diekert, G.
Deposit date:2016-10-30
Release date:2017-07-12
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.857 Å)
Cite:Cobamide-mediated enzymatic reductive dehalogenation via long-range electron transfer.
Nat Commun, 8, 2017
8UAE
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BU of 8uae by Molmil
E. coli Sir2_HerA complex (12:6) with ATPgamaS
Descriptor: MAGNESIUM ION, Nucleoside triphosphate hydrolase, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, ...
Authors:Shen, Z.F, Lin, Q.P, Fu, T.M.
Deposit date:2023-09-20
Release date:2023-12-27
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.25 Å)
Cite:Assembly-mediated activation of the SIR2-HerA supramolecular complex for anti-phage defense.
Mol.Cell, 83, 2023
8UAF
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BU of 8uaf by Molmil
E. coli Sir2_HerA complex (12:6) bound with NAD+
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Shen, Z.F, Lin, Q.P, Fu, T.M.
Deposit date:2023-09-20
Release date:2023-12-27
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.18 Å)
Cite:Assembly-mediated activation of the SIR2-HerA supramolecular complex for anti-phage defense.
Mol.Cell, 83, 2023
2K2Y
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BU of 2k2y by Molmil
Solution structure of the folded domain of intermediate IIIa of Tick Carboxypeptidase Inhibitor
Descriptor: Carboxypeptidase inhibitor
Authors:Pantoja-Uceda, D, Blanco, F.
Deposit date:2008-04-15
Release date:2009-01-27
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:The NMR structures of the major intermediates of the two-domain tick carboxypeptidase inhibitor reveal symmetry in its folding and unfolding pathways.
J.Biol.Chem., 283, 2008
2K2Z
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BU of 2k2z by Molmil
Solution structure of the folded domain of intermediate IIIb of Tick Carboxypeptidase Inhibitor
Descriptor: Carboxypeptidase inhibitor
Authors:Pantoja-Uceda, D, Blanco, F.
Deposit date:2008-04-15
Release date:2009-01-27
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:The NMR structures of the major intermediates of the two-domain tick carboxypeptidase inhibitor reveal symmetry in its folding and unfolding pathways.
J.Biol.Chem., 283, 2008
3RTK
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BU of 3rtk by Molmil
Crystal structure of Cpn60.2 from Mycobacterium tuberculosis at 2.8A
Descriptor: 60 kDa chaperonin 2, MAGNESIUM ION
Authors:Shahar, A, Melamed-Frank, M, Kashi, Y, Adir, N.
Deposit date:2011-05-03
Release date:2011-08-10
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The dimeric structure of the Cpn60.2 chaperonin of Mycobacterium tuberculosis at 2.8 A reveals possible modes of function.
J.Mol.Biol., 412, 2011

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