9E1U
 
 | | Snf2h bound nucleosome complex - ClassC1 | | Descriptor: | ADENOSINE-5'-DIPHOSPHATE, DNA (151-MER), DNA (152-MER), ... | | Authors: | Malik, D, Deshmukh, A.A, Bilokapic, S, Halic, M. | | Deposit date: | 2024-10-21 | | Release date: | 2025-01-22 | | Last modified: | 2025-05-28 | | Method: | ELECTRON MICROSCOPY (3.1 Å) | | Cite: | Mechanisms of chromatin remodeling by an Snf2-type ATPase.
Biorxiv, 2025
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9E1Y
 | | Empty Nucleosome with 601 widom sequence | | Descriptor: | DNA (153-MER), Histone H2A type 1, Histone H2B 1.1, ... | | Authors: | Malik, D, Deshmukh, A.A, Bilokapic, S, Halic, M. | | Deposit date: | 2024-10-21 | | Release date: | 2025-01-22 | | Last modified: | 2025-05-28 | | Method: | ELECTRON MICROSCOPY (2.6 Å) | | Cite: | Mechanisms of chromatin remodeling by an Snf2-type ATPase.
Biorxiv, 2025
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9E1R
 | | Snf2h bound nucleosome complex - ClassB4 | | Descriptor: | ADENOSINE-5'-DIPHOSPHATE, DNA (152-MER), Histone H2A type 1, ... | | Authors: | Malik, D, Deshmukh, A.A, Bilokapic, S, Halic, M. | | Deposit date: | 2024-10-21 | | Release date: | 2025-01-22 | | Last modified: | 2025-05-21 | | Method: | ELECTRON MICROSCOPY (3.1 Å) | | Cite: | Snf2h bound nucleosome complex-ClassB4
To Be Published
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9E1W
 | | Snf2h bound nucleosome complex - ClassC3 | | Descriptor: | ADENOSINE-5'-DIPHOSPHATE, DNA (151-MER), DNA (152-MER), ... | | Authors: | Malik, D, Deshmukh, A.A, Bilokapic, S, Halic, M. | | Deposit date: | 2024-10-21 | | Release date: | 2025-01-22 | | Last modified: | 2025-05-28 | | Method: | ELECTRON MICROSCOPY (3.2 Å) | | Cite: | Snf2h bound nucleosome complex-ClassC3
To Be Published
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9E1L
 | | Snf2h bound nucleosome complex - ClassA1 | | Descriptor: | ADENOSINE-5'-TRIPHOSPHATE, DNA (149-MER), DNA (151-MER), ... | | Authors: | Malik, D, Deshmukh, A.A, Bilokapic, S, Halic, M. | | Deposit date: | 2024-10-21 | | Release date: | 2025-01-22 | | Last modified: | 2025-05-28 | | Method: | ELECTRON MICROSCOPY (3.15 Å) | | Cite: | Snf2h bound nucleosome complex-ClassA1
To Be Published
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9E1M
 | | Snf2h bound nucleosome complex - ClassA2 | | Descriptor: | ADENOSINE-5'-TRIPHOSPHATE, DNA (149-MER), DNA (151-MER), ... | | Authors: | Malik, D, Deshmukh, A.A, Bilokapic, S, Halic, M. | | Deposit date: | 2024-10-21 | | Release date: | 2025-01-22 | | Last modified: | 2025-05-14 | | Method: | ELECTRON MICROSCOPY (3.25 Å) | | Cite: | Snf2h bound nucleosome complex - ClassA2
To Be Published
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9E1V
 | | Snf2h bound nucleosome complex - ClassC2 | | Descriptor: | ADENOSINE-5'-DIPHOSPHATE, DNA (151-MER), DNA (152-MER), ... | | Authors: | Malik, D, Deshmukh, A.A, Bilokapic, S, Halic, M. | | Deposit date: | 2024-10-21 | | Release date: | 2025-01-22 | | Last modified: | 2025-05-21 | | Method: | ELECTRON MICROSCOPY (3.1 Å) | | Cite: | Snf2h bound nucleosome complex-ClassC2
To Be Published
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8SKZ
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9EGY
 | | RNA polymerase II-DSIF-SPT6-PAF1c-TFIIS-IWS1-nucleosome, bp +27 | | Descriptor: | DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit RPB3, DNA-directed RNA polymerase II subunit RPB7, ... | | Authors: | Markert, J, Farnung, L. | | Deposit date: | 2024-11-21 | | Release date: | 2024-12-18 | | Last modified: | 2025-05-14 | | Method: | ELECTRON MICROSCOPY (2.9 Å) | | Cite: | Structural basis of H3K36 trimethylation by SETD2 during chromatin transcription.
Science, 387, 2025
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9EGX
 | | RNA polymerase II-DSIF-SPT6-PAF1c-TFIIS-IWS1-hexasome, bp +27 | | Descriptor: | DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit RPB3, DNA-directed RNA polymerase II subunit RPB7, ... | | Authors: | Markert, J, Farnung, L. | | Deposit date: | 2024-11-21 | | Release date: | 2024-12-18 | | Last modified: | 2025-05-28 | | Method: | ELECTRON MICROSCOPY (2.9 Å) | | Cite: | Structural basis of H3K36 trimethylation by SETD2 during chromatin transcription.
Science, 387, 2025
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8THU
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9EGZ
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9EH0
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8T9F
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9EH2
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8T9H
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9BE5
 | | Cryo-EM structure of Human Nucleosome collected by EPU on Glacios at 3.3 Angstrom resolution | | Descriptor: | DNA (145-MER), Histone H2A type 1, Histone H2A type 1-B/E, ... | | Authors: | Jia, L, Ruben, E.A, Olsen, S.K, Wasmuth, E.V. | | Deposit date: | 2024-04-14 | | Release date: | 2025-04-30 | | Last modified: | 2025-05-21 | | Method: | ELECTRON MICROSCOPY (3.3 Å) | | Cite: | Cryo-EM structure of Human Nucleosome collected by EPU on Glacios at 3.3 Angstrom resolution
To Be Published
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9BE6
 | | Cryo-EM structure of Human Nucleosome collected by Leginon on Krios at 3.0 Angstrom resolution | | Descriptor: | DNA (145-MER), Histone H2A type 1, Histone H2A type 1-B/E, ... | | Authors: | Jia, L, Ruben, E.A, Olsen, S.K, Wasmuth, E.V. | | Deposit date: | 2024-04-14 | | Release date: | 2025-04-30 | | Last modified: | 2025-05-28 | | Method: | ELECTRON MICROSCOPY (3 Å) | | Cite: | Cryo-EM structure of Human Nucleosome collected by Leginon on Krios at 3.0 Angstrom resolution
To Be Published
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9DDE
 | | ncPRC1RYBP bound to H2AK119Ub/H1.4 chromatosome | | Descriptor: | DNA (187-MER), E3 ubiquitin-protein ligase RING2, Histone H1.4, ... | | Authors: | Godinez-Lopez, V, Valencia-Sanchez, M.I, Armache, J.P, Armache, K.-J. | | Deposit date: | 2024-08-28 | | Release date: | 2024-11-20 | | Last modified: | 2025-01-15 | | Method: | ELECTRON MICROSCOPY (3.2 Å) | | Cite: | Read-write mechanisms of H2A ubiquitination by Polycomb repressive complex 1.
Nature, 636, 2024
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9DG3
 | | ncPRC1RYBP Delta-linker mutant bound to singly modified H2AK119Ub nucleosome | | Descriptor: | DNA (187-MER), Histone H2A type 1, Histone H2B 1.1, ... | | Authors: | Godinez-Lopez, V, Valencia-Sanchez, M.I, Armache, J.P, Armache, K.-J. | | Deposit date: | 2024-09-01 | | Release date: | 2024-11-20 | | Last modified: | 2025-01-15 | | Method: | ELECTRON MICROSCOPY (3.46 Å) | | Cite: | Read-write mechanisms of H2A ubiquitination by Polycomb repressive complex 1.
Nature, 636, 2024
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9DBY
 | | ncPRC1RYBP bound to singly modified H2AK119Ub nucleosome | | Descriptor: | DNA (187-MER), E3 ubiquitin-protein ligase RING2, Histone H2A type 1, ... | | Authors: | Godinez-Lopez, V, Valencia-Sanchez, M.I, Armache, J.P, Armache, K.-J. | | Deposit date: | 2024-08-24 | | Release date: | 2024-11-20 | | Last modified: | 2025-01-15 | | Method: | ELECTRON MICROSCOPY (2.8 Å) | | Cite: | Read-write mechanisms of H2A ubiquitination by Polycomb repressive complex 1.
Nature, 636, 2024
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8TOF
 | | Rpd3S bound to an H3K36Cme3 modified nucleosome | | Descriptor: | Chromatin modification-related protein EAF3, DNA (176-MER), Histone H2A, ... | | Authors: | Markert, J.W, Vos, S.M, Farnung, L. | | Deposit date: | 2023-08-03 | | Release date: | 2024-01-17 | | Last modified: | 2024-11-06 | | Method: | ELECTRON MICROSCOPY (2.8 Å) | | Cite: | Structure of the complete Saccharomyces cerevisiae Rpd3S-nucleosome complex.
Nat Commun, 14, 2023
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9EAR
 | | CHD1-nucleosome complex (closed state) | | Descriptor: | ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, Chromodomain-helicase-DNA-binding protein 1, ... | | Authors: | James, A.M, Farnung, L. | | Deposit date: | 2024-11-11 | | Release date: | 2025-05-07 | | Last modified: | 2025-05-28 | | Method: | ELECTRON MICROSCOPY (3.1 Å) | | Cite: | Structural basis of human CHD1 nucleosome recruitment and pausing.
Mol.Cell, 85, 2025
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8T9G
 | | Automethylated PRC2 dimer bound to nucleosome | | Descriptor: | DNA (226-MER), Histone H2A type 1, Histone H2B 1.1, ... | | Authors: | Sauer, P.V, Pavlenko, E, Nogales, E, Poepsel, S. | | Deposit date: | 2023-06-23 | | Release date: | 2024-09-25 | | Last modified: | 2024-11-06 | | Method: | ELECTRON MICROSCOPY (6.2 Å) | | Cite: | Activation of automethylated PRC2 by dimerization on chromatin.
Mol.Cell, 84, 2024
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8SMX
 | | Cryo-EM structure of the human nucleosome core particle in complex with RNF168 and UbcH5c~Ub (UbcH5c chemically conjugated to histone H2A. No density for Ub.) (class 2) | | Descriptor: | DNA (147-MER), E3 ubiquitin-protein ligase RNF168, Histone H2A type 1-B/E, ... | | Authors: | Hu, Q, Botuyan, M.V, Zhao, D, Cui, G, Mer, G. | | Deposit date: | 2023-04-26 | | Release date: | 2024-01-17 | | Last modified: | 2024-11-06 | | Method: | ELECTRON MICROSCOPY (3.2 Å) | | Cite: | Mechanisms of RNF168 nucleosome recognition and ubiquitylation.
Mol.Cell, 84, 2024
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