3JCZ
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![BU of 3jcz by Molmil](/molmil-images/mine/3jcz) | Structure of bovine glutamate dehydrogenase in the unliganded state | Descriptor: | Glutamate dehydrogenase 1, mitochondrial | Authors: | Borgnia, M.J, Banerjee, S, Merk, A, Matthies, D, Bartesaghi, A, Rao, P, Pierson, J, Earl, L.A, Falconieri, V, Subramaniam, S, Milne, J.L.S. | Deposit date: | 2016-03-27 | Release date: | 2016-04-27 | Last modified: | 2024-02-21 | Method: | ELECTRON MICROSCOPY (3.26 Å) | Cite: | Using Cryo-EM to Map Small Ligands on Dynamic Metabolic Enzymes: Studies with Glutamate Dehydrogenase. Mol.Pharmacol., 89, 2016
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3JD3
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![BU of 3jd3 by Molmil](/molmil-images/mine/3jd3) | Glutamate dehydrogenase in complex with NADH and GTP, open conformation | Descriptor: | 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, GUANOSINE-5'-TRIPHOSPHATE, Glutamate dehydrogenase 1, ... | Authors: | Borgnia, M.J, Banerjee, S, Merk, A, Matthies, D, Bartesaghi, A, Rao, P, Pierson, J, Earl, L.A, Falconieri, V, Subramaniam, S, Milne, J.L.S. | Deposit date: | 2016-03-28 | Release date: | 2016-04-27 | Last modified: | 2024-02-21 | Method: | ELECTRON MICROSCOPY (3.6 Å) | Cite: | Using Cryo-EM to Map Small Ligands on Dynamic Metabolic Enzymes: Studies with Glutamate Dehydrogenase. Mol.Pharmacol., 89, 2016
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1L1F
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![BU of 1l1f by Molmil](/molmil-images/mine/1l1f) | Structure of human glutamate dehydrogenase-apo form | Descriptor: | Glutamate Dehydrogenase 1 | Authors: | Smith, T.J, Schmidt, T, Fang, J, Wu, J, Siuzdak, G, Stanley, C.A. | Deposit date: | 2002-02-15 | Release date: | 2002-03-06 | Last modified: | 2024-02-14 | Method: | X-RAY DIFFRACTION (2.7 Å) | Cite: | The structure of apo human glutamate dehydrogenase details subunit communication and allostery. J.Mol.Biol., 318, 2002
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3JD2
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![BU of 3jd2 by Molmil](/molmil-images/mine/3jd2) | Glutamate dehydrogenase in complex with NADH, open conformation | Descriptor: | 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, Glutamate dehydrogenase 1, mitochondrial | Authors: | Borgnia, M.J, Banerjee, S, Merk, A, Matthies, D, Bartesaghi, A, Rao, P, Pierson, J, Earl, L.A, Falconieri, V, Subramaniam, S, Milne, J.L.S. | Deposit date: | 2016-03-28 | Release date: | 2016-04-27 | Last modified: | 2024-02-21 | Method: | ELECTRON MICROSCOPY (3.3 Å) | Cite: | Using Cryo-EM to Map Small Ligands on Dynamic Metabolic Enzymes: Studies with Glutamate Dehydrogenase. Mol.Pharmacol., 89, 2016
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7ECT
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![BU of 7ect by Molmil](/molmil-images/mine/7ect) | Crystal Structure of Aspergillus terreus Glutamate Dehydrogenase (AtGDH) Complexed With Tartrate and NADPH | Descriptor: | GLYCEROL, Glutamate dehydrogenase, L(+)-TARTARIC ACID, ... | Authors: | Godsora, B.K.J, Prakash, P, Punekar, N.S, Bhaumik, P. | Deposit date: | 2021-03-13 | Release date: | 2021-12-08 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (2.9 Å) | Cite: | Molecular insights into the inhibition of glutamate dehydrogenase by the dicarboxylic acid metabolites. Proteins, 90, 2022
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7ECR
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![BU of 7ecr by Molmil](/molmil-images/mine/7ecr) | Crystal Structure of Aspergillus terreus Glutamate Dehydrogenase (AtGDH) Complexed With Succinate and ADP-ribose | Descriptor: | GLYCEROL, Glutamate dehydrogenase, SUCCINIC ACID, ... | Authors: | Godsora, B.K.J, Prakash, P, Punekar, N.S, Bhaumik, P. | Deposit date: | 2021-03-13 | Release date: | 2021-12-08 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (1.73 Å) | Cite: | Molecular insights into the inhibition of glutamate dehydrogenase by the dicarboxylic acid metabolites. Proteins, 90, 2022
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7ECS
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![BU of 7ecs by Molmil](/molmil-images/mine/7ecs) | Crystal Structure of Aspergillus terreus Glutamate Dehydrogenase (AtGDH) Complexed With Malonate and NADPH | Descriptor: | GLYCEROL, Glutamate dehydrogenase, MALONATE ION, ... | Authors: | Godsora, B.K.J, Prakash, P, Punekar, N.S, Bhaumik, P. | Deposit date: | 2021-03-13 | Release date: | 2021-12-08 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (1.74 Å) | Cite: | Molecular insights into the inhibition of glutamate dehydrogenase by the dicarboxylic acid metabolites. Proteins, 90, 2022
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1NR7
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![BU of 1nr7 by Molmil](/molmil-images/mine/1nr7) | Crystal structure of apo bovine glutamate dehydrogenase | Descriptor: | Glutamate dehydrogenase 1 | Authors: | Banerjee, S, Schmidt, T, Fang, J, Stanley, C.A, Smith, T.J. | Deposit date: | 2003-01-23 | Release date: | 2003-05-06 | Last modified: | 2024-02-14 | Method: | X-RAY DIFFRACTION (3.3 Å) | Cite: | Structural studies on ADP activation of mammalian glutamate dehydrogenase and the evolution of regulation Biochemistry, 42, 2003
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5XVV
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![BU of 5xvv by Molmil](/molmil-images/mine/5xvv) | Crystal Structure of Forward Inhibited Aspergillus niger Glutamate Dehydrogenase With Both Apo- and Alpha Ketoglutarate Bound Subunits | Descriptor: | 2-OXOGLUTARIC ACID, BETA-MERCAPTOETHANOL, GLYCEROL, ... | Authors: | Prakash, P, Punekar, N.S, Bhaumik, P. | Deposit date: | 2017-06-28 | Release date: | 2018-03-21 | Last modified: | 2018-05-09 | Method: | X-RAY DIFFRACTION (2.25 Å) | Cite: | Structural basis for the catalytic mechanism and alpha-ketoglutarate cooperativity of glutamate dehydrogenase. J. Biol. Chem., 293, 2018
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5XVX
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![BU of 5xvx by Molmil](/molmil-images/mine/5xvx) | Crystal Structure of Aspergillus niger Glutamate Dehydrogenase Complexed With Alpha-ketoglutarate and NADPH | Descriptor: | 2-OXOGLUTARIC ACID, DI(HYDROXYETHYL)ETHER, GLYCEROL, ... | Authors: | Prakash, P, Punekar, N.S, Bhaumik, P. | Deposit date: | 2017-06-28 | Release date: | 2018-03-21 | Last modified: | 2024-03-27 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | Structural basis for the catalytic mechanism and alpha-ketoglutarate cooperativity of glutamate dehydrogenase. J. Biol. Chem., 293, 2018
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7F79
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![BU of 7f79 by Molmil](/molmil-images/mine/7f79) | Crystal structure of glutamate dehydrogenase 3 from Candida albicans in complex with alpha-ketoglutarate and NADPH | Descriptor: | 2-OXOGLUTARIC ACID, GLYCEROL, Glutamate dehydrogenase, ... | Authors: | Li, N, Wang, W, Zeng, X, Liu, M, Li, M, Li, C, Wang, M. | Deposit date: | 2021-06-28 | Release date: | 2021-07-21 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (2.7 Å) | Cite: | Crystal structure of glutamate dehydrogenase 3 from Candida albicans. Biochem.Biophys.Res.Commun., 570, 2021
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7F77
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![BU of 7f77 by Molmil](/molmil-images/mine/7f77) | Crystal structure of glutamate dehydrogenase 3 from Candida albicans | Descriptor: | Glutamate dehydrogenase | Authors: | Li, N, Wang, W, Zeng, X, Liu, M, Li, M, Li, C, Wang, M. | Deposit date: | 2021-06-28 | Release date: | 2021-07-21 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (3.086 Å) | Cite: | Crystal structure of glutamate dehydrogenase 3 from Candida albicans. Biochem.Biophys.Res.Commun., 570, 2021
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1NR1
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![BU of 1nr1 by Molmil](/molmil-images/mine/1nr1) | Crystal structure of the R463A mutant of human Glutamate dehydrogenase | Descriptor: | Glutamate dehydrogenase 1 | Authors: | Banerjee, S, Schmidt, T, Fang, J, Stanley, C.A, Smith, T.J. | Deposit date: | 2003-01-23 | Release date: | 2003-05-06 | Last modified: | 2024-02-14 | Method: | X-RAY DIFFRACTION (3.3 Å) | Cite: | Structural studies on ADP activation of mammalian glutamate dehydrogenase and the evolution of regulation Biochemistry, 42, 2003
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5XVI
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![BU of 5xvi by Molmil](/molmil-images/mine/5xvi) | |
5XW0
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![BU of 5xw0 by Molmil](/molmil-images/mine/5xw0) | Crystal Structure of Aspergillus niger Glutamate Dehydrogenase Complexed With Isophthalate and NADPH | Descriptor: | DI(HYDROXYETHYL)ETHER, GLYCEROL, Glutamate dehydrogenase, ... | Authors: | Prakash, P, Punekar, N.S, Bhaumik, P. | Deposit date: | 2017-06-28 | Release date: | 2018-03-21 | Last modified: | 2024-03-27 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Structural basis for the catalytic mechanism and alpha-ketoglutarate cooperativity of glutamate dehydrogenase. J. Biol. Chem., 293, 2018
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5XWC
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![BU of 5xwc by Molmil](/molmil-images/mine/5xwc) | Crystal Structure of Aspergillus niger Glutamate Dehydrogenase Complexed With Alpha-iminoglutarate, 2-amino-2-hydroxyglutarate and NADP | Descriptor: | (2S)-2-azanyl-2-oxidanyl-pentanedioic acid, (2Z)-2-iminopentanedioic acid, DI(HYDROXYETHYL)ETHER, ... | Authors: | Prakash, P, Punekar, N.S, Bhaumik, P. | Deposit date: | 2017-06-29 | Release date: | 2018-03-21 | Last modified: | 2024-03-27 | Method: | X-RAY DIFFRACTION (1.75 Å) | Cite: | Structural basis for the catalytic mechanism and alpha-ketoglutarate cooperativity of glutamate dehydrogenase. J. Biol. Chem., 293, 2018
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1NQT
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![BU of 1nqt by Molmil](/molmil-images/mine/1nqt) | Crystal structure of bovine Glutamate dehydrogenase-ADP complex | Descriptor: | ADENOSINE-5'-DIPHOSPHATE, Glutamate dehydrogenase 1 | Authors: | Banerjee, S, Schmidt, T, Fang, J, Stanley, C.A, Smith, T.J. | Deposit date: | 2003-01-23 | Release date: | 2003-05-06 | Last modified: | 2024-04-03 | Method: | X-RAY DIFFRACTION (3.5 Å) | Cite: | Structural studies on ADP activation of mammalian glutamate dehydrogenase and the evolution of regulation Biochemistry, 42, 2003
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6DHQ
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![BU of 6dhq by Molmil](/molmil-images/mine/6dhq) | |
8HJ9
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![BU of 8hj9 by Molmil](/molmil-images/mine/8hj9) | cryoEM structure of glutamate dehydrogenase from Thermococcus profundus in complex with NADP | Descriptor: | Glutamate dehydrogenase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | Authors: | Wakabayashi, T, Oide, M, Kato, T, Nakasako, M. | Deposit date: | 2022-11-22 | Release date: | 2023-02-08 | Last modified: | 2023-12-20 | Method: | ELECTRON MICROSCOPY (3.12 Å) | Cite: | Coenzyme-binding pathway on glutamate dehydrogenase suggested from multiple-binding sites visualized by cryo-electron microscopy. Febs J., 290, 2023
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8HJ3
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![BU of 8hj3 by Molmil](/molmil-images/mine/8hj3) | cryoEM structure of glutamate dehydrogenase from Thermococcus profundus in complex with NADP | Descriptor: | Glutamate dehydrogenase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | Authors: | Wakabayashi, T, Oide, M, Kato, T, Nakasako, M. | Deposit date: | 2022-11-22 | Release date: | 2023-02-08 | Last modified: | 2023-12-20 | Method: | ELECTRON MICROSCOPY (3.29 Å) | Cite: | Coenzyme-binding pathway on glutamate dehydrogenase suggested from multiple-binding sites visualized by cryo-electron microscopy. Febs J., 290, 2023
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8HHO
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![BU of 8hho by Molmil](/molmil-images/mine/8hho) | cryoEM structure of glutamate dehydrogenase from Thermococcus profundus in complex with NADP | Descriptor: | Glutamate dehydrogenase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | Authors: | Wakabayashi, T, Oide, M, Kato, T, Nakasako, M. | Deposit date: | 2022-11-16 | Release date: | 2023-02-08 | Last modified: | 2023-12-20 | Method: | ELECTRON MICROSCOPY (3.2 Å) | Cite: | Coenzyme-binding pathway on glutamate dehydrogenase suggested from multiple-binding sites visualized by cryo-electron microscopy. Febs J., 290, 2023
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8HIQ
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![BU of 8hiq by Molmil](/molmil-images/mine/8hiq) | cryoEM structure of glutamate dehydrogenase from Thermococcus profundus in complex with NADP | Descriptor: | Glutamate dehydrogenase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | Authors: | Wakabayashi, T, Oide, M, Kato, T, Nakasako, M. | Deposit date: | 2022-11-21 | Release date: | 2023-02-08 | Last modified: | 2023-12-20 | Method: | ELECTRON MICROSCOPY (3.2 Å) | Cite: | Coenzyme-binding pathway on glutamate dehydrogenase suggested from multiple-binding sites visualized by cryo-electron microscopy. Febs J., 290, 2023
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8HIZ
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![BU of 8hiz by Molmil](/molmil-images/mine/8hiz) | cryoEM structure of glutamate dehydrogenase from Thermococcus profundus in complex with NADP | Descriptor: | Glutamate dehydrogenase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | Authors: | Wakabayashi, T, Oide, M, Kato, T, Nakasako, M. | Deposit date: | 2022-11-22 | Release date: | 2023-02-08 | Last modified: | 2023-12-20 | Method: | ELECTRON MICROSCOPY (3.08 Å) | Cite: | Coenzyme-binding pathway on glutamate dehydrogenase suggested from multiple-binding sites visualized by cryo-electron microscopy. Febs J., 290, 2023
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6DHL
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![BU of 6dhl by Molmil](/molmil-images/mine/6dhl) | Bovine glutamate dehydrogenase complexed with epicatechin-3-gallate (ECG) | Descriptor: | (2R,3S)-2-(3,4-dihydroxyphenyl)-5,7-dihydroxy-3,4-dihydro-2H-chromen-3-yl 3,4,5-trihydroxybenzoate, Glutamate dehydrogenase 1, mitochondrial | Authors: | Smith, T.J. | Deposit date: | 2018-05-20 | Release date: | 2018-07-25 | Method: | X-RAY DIFFRACTION (3.624 Å) | Cite: | Green tea polyphenols control dysregulated glutamate dehydrogenase in transgenic mice by hijacking the ADP activation site. J. Biol. Chem., 286, 2011
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6DHN
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![BU of 6dhn by Molmil](/molmil-images/mine/6dhn) | Bovine glutamate dehydrogenase complexed with Eu3+ | Descriptor: | 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, GLUTAMIC ACID, GUANOSINE-5'-TRIPHOSPHATE, ... | Authors: | Smith, T.J. | Deposit date: | 2018-05-20 | Release date: | 2018-07-25 | Method: | X-RAY DIFFRACTION (3.3 Å) | Cite: | A novel mechanism of V-type zinc inhibition of glutamate dehydrogenase results from disruption of subunit interactions necessary for efficient catalysis. FEBS J., 278, 2011
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