Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3LF4
DownloadVisualize
BU of 3lf4 by Molmil
Crystal Structure of Fluorescent Timer Precursor Blue102
Descriptor: Fluorescent Timer Precursor Blue102
Authors:Pletnev, S, Dauter, Z.
Deposit date:2010-01-15
Release date:2010-03-09
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.808 Å)
Cite:Understanding blue-to-red conversion in monomeric fluorescent timers and hydrolytic degradation of their chromophores
J.Am.Chem.Soc., 132, 2010
3LVD
DownloadVisualize
BU of 3lvd by Molmil
Crystal structure of GFP-like protein aceGFP_G222E (A. coerulescens). UV-photoconverted green form.
Descriptor: GLYCEROL, Green fluorescent protein
Authors:Pletneva, N.V, Pletnev, V.Z, Pletnev, S.V.
Deposit date:2010-02-19
Release date:2010-03-09
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.751 Å)
Cite:Structural evidence for a dehydrated intermediate in green fluorescent protein chromophore biosynthesis.
J.Biol.Chem., 285, 2010
3LF3
DownloadVisualize
BU of 3lf3 by Molmil
Crystal Structure of Fast Fluorescent Timer Fast-FT
Descriptor: Fast Fluorescent Timer Fast-FT
Authors:Pletnev, S, Dauter, Z.
Deposit date:2010-01-15
Release date:2010-03-09
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Understanding blue-to-red conversion in monomeric fluorescent timers and hydrolytic degradation of their chromophores
J.Am.Chem.Soc., 132, 2010
3GEX
DownloadVisualize
BU of 3gex by Molmil
1.6 angstrom crystal structure of fluorescent protein Cypet
Descriptor: Green fluorescent protein
Authors:Hu, X, Liu, R.
Deposit date:2009-02-26
Release date:2010-03-09
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:1.6 angstrom crystal structure of fluorescent protein Cypet
To be Published
3IP2
DownloadVisualize
BU of 3ip2 by Molmil
Crystal structure of red fluorescent protein Neptune at pH 7.0
Descriptor: Neptune red fluorescent protein
Authors:Lin, M.Z, McKeown, M.R, Ng, H.L, Aguilera, T.A, Shaner, N.C, Ma, W, Adams, S.R, Campbell, R.E, Alber, T, Tsien, R.Y.
Deposit date:2009-08-15
Release date:2009-12-15
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Autofluorescent proteins with excitation in the optical window for intravital imaging in mammals.
Chem.Biol., 16, 2009
3K1K
DownloadVisualize
BU of 3k1k by Molmil
Green fluorescent protein bound to enhancer nanobody
Descriptor: Enhancer, Green Fluorescent Protein
Authors:Kirchhofer, A, Helma, J, Schmidthals, K, Frauer, C, Cui, S, Karcher, A, Pellis, M, Muyldermans, S, Delucci, C.C, Cardoso, M.C, Leonhardt, H, Hopfner, K.-P, Rothbauer, U.
Deposit date:2009-09-28
Release date:2009-12-08
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Modulation of protein properties in living cells using nanobodies
Nat.Struct.Mol.Biol., 17, 2010
3G9A
DownloadVisualize
BU of 3g9a by Molmil
Green fluorescent protein bound to minimizer nanobody
Descriptor: Green fluorescent protein, Minimizer
Authors:Kirchhofer, A, Helma, J, Schmidthals, K, Frauer, C, Cui, S, Karcher, A, Pellis, M, Muyldermans, S, Delucci, C.C, Cardoso, M.C, Leonhardt, H, Hopfner, K.-P, Rothbauer, U.
Deposit date:2009-02-13
Release date:2009-12-08
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.614 Å)
Cite:Modulation of protein properties in living cells using nanobodies
Nat.Struct.Mol.Biol., 17, 2010
3KCS
DownloadVisualize
BU of 3kcs by Molmil
Crystal structure of PAmCherry1 in the dark state
Descriptor: PAmCherry1 protein
Authors:Malashkevich, V.N, Subach, F.V, Zencheck, W.D, Xiao, H, Filonov, G.S, Almo, S.C, Verkhusha, V.V.
Deposit date:2009-10-21
Release date:2009-11-17
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Photoactivation mechanism of PAmCherry based on crystal structures of the protein in the dark and fluorescent states.
Proc.Natl.Acad.Sci.USA, 106, 2009
3KCT
DownloadVisualize
BU of 3kct by Molmil
CRYSTAL STRUCTURE OF PAmCherry1 in the photoactivated state
Descriptor: PAmCherry1 protein
Authors:Malashkevich, V.N, Subach, F.V, Zencheck, W.D, Xiao, H, Filonov, G.S, Almo, S.C, Verkhusha, V.V.
Deposit date:2009-10-21
Release date:2009-11-17
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Photoactivation mechanism of PAmCherry based on crystal structures of the protein in the dark and fluorescent states.
Proc.Natl.Acad.Sci.USA, 106, 2009
2WSO
DownloadVisualize
BU of 2wso by Molmil
Structure of Cerulean Fluorescent Protein at physiological pH
Descriptor: GREEN FLUORESCENT PROTEIN
Authors:Lelimousin, M, Noirclerc-Savoye, M, Lazareno-Saez, C, Paetzold, B, Le Vot, S, Chazal, R, Macheboeuf, P, Field, M.J, Bourgeois, D, Royant, A.
Deposit date:2009-09-08
Release date:2009-09-29
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Intrinsic Dynamics in Ecfp and Cerulean Control Fluorescence Quantum Yield.
Biochemistry, 48, 2009
2WSN
DownloadVisualize
BU of 2wsn by Molmil
Structure of Enhanced Cyan Fluorescent Protein at physiological pH
Descriptor: GREEN FLUORESCENT PROTEIN
Authors:Lelimousin, M, Noirclerc-Savoye, M, Lazareno-Saez, C, Paetzold, B, Le Vot, S, Chazal, R, Macheboeuf, P, Field, M.J, Bourgeois, D, Royant, A.
Deposit date:2009-09-08
Release date:2009-09-29
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:Intrinsic Dynamics in Ecfp and Cerulean Control Fluorescence Quantum Yield.
Biochemistry, 48, 2009
3GB3
DownloadVisualize
BU of 3gb3 by Molmil
X-ray structure of genetically encoded photosensitizer KillerRed in native form
Descriptor: KillerRed, SULFATE ION
Authors:Pletnev, S, Pletneva, N.V, Pletnev, V.Z.
Deposit date:2009-02-18
Release date:2009-09-08
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural basis for phototoxicity of the genetically encoded photosensitizer KillerRed.
J.Biol.Chem., 284, 2009
3H1O
DownloadVisualize
BU of 3h1o by Molmil
The Structure of Fluorescent Protein FP480
Descriptor: Fluorescent protein FP480, GLYCEROL
Authors:Pletnev, S, Morozova, K.S, Verkhusha, V.V, Dauter, Z.
Deposit date:2009-04-13
Release date:2009-09-08
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Rotational order-disorder structure of fluorescent protein FP480
Acta Crystallogr.,Sect.D, 65, 2009
3IR8
DownloadVisualize
BU of 3ir8 by Molmil
Red fluorescent protein mKeima at pH 7.0
Descriptor: Large stokes shift fluorescent protein
Authors:Henderson, J.N, Osborn, M.F, Koon, N, Gepshtein, R, Huppert, D, Remington, S.J.
Deposit date:2009-08-21
Release date:2009-09-08
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Excited state proton transfer in the red fluorescent protein mKeima.
J.Am.Chem.Soc., 131, 2009
3GL4
DownloadVisualize
BU of 3gl4 by Molmil
X-ray structure of photobleached killerred
Descriptor: KillerRed
Authors:Pletnev, S, Pletneva, N.V, Pletnev, V.Z.
Deposit date:2009-03-11
Release date:2009-09-08
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural basis for phototoxicity of the genetically encoded photosensitizer KillerRed.
J.Biol.Chem., 284, 2009
3H1R
DownloadVisualize
BU of 3h1r by Molmil
Order-disorder structure of fluorescent protein FP480
Descriptor: Fluorescent protein FP480
Authors:Pletnev, S, Morozova, K.S, Verkhusha, V.V, Dauter, Z.
Deposit date:2009-04-13
Release date:2009-09-08
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (2.41 Å)
Cite:Rotational order-disorder structure of fluorescent protein FP480
Acta Crystallogr.,Sect.D, 65, 2009
2WHT
DownloadVisualize
BU of 2wht by Molmil
Fluorescent Protein mKeima at pH 5.6
Descriptor: LARGE STOKES SHIFT FLUORESCENT PROTEIN
Authors:Violot, S, Carpentier, P, Blanchoin, L, Bourgeois, D.
Deposit date:2009-05-06
Release date:2009-08-11
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Reverse Ph-Dependence of Chromophore Protonation Explains the Large Stokes Shift of the Red Fluorescent Protein Mkeima.
J.Am.Chem.Soc., 131, 2009
2WIS
DownloadVisualize
BU of 2wis by Molmil
Fluorescent protein KillerRed in the bleached state
Descriptor: KILLERRED, SODIUM ION
Authors:Carpentier, P, Violot, S, Blanchoin, L, Bourgeois, D.
Deposit date:2009-05-15
Release date:2009-08-11
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structural Basis for the Phototoxicity of the Fluorescent Protein Killerred.
FEBS Lett., 583, 2009
2WHS
DownloadVisualize
BU of 2whs by Molmil
Fluorescent Protein mKeima at pH 3.8
Descriptor: LARGE STOKES SHIFT FLUORESCENT PROTEIN, SULFATE ION
Authors:Violot, S, Carpentier, P, Blanchoin, L, Bourgeois, D.
Deposit date:2009-05-06
Release date:2009-08-11
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Reverse Ph-Dependence of Chromophore Protonation Explains the Large Stokes Shift of the Red Fluorescent Protein Mkeima.
J.Am.Chem.Soc., 131, 2009
2WIQ
DownloadVisualize
BU of 2wiq by Molmil
Fluorescent protein KillerRed in the native state
Descriptor: KILLERRED, SODIUM ION, SULFATE ION
Authors:Carpentier, P, Violot, S, Blanchoin, L, Bourgeois, D.
Deposit date:2009-05-15
Release date:2009-08-11
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Basis for the Phototoxicity of the Fluorescent Protein Killerred.
FEBS Lett., 583, 2009
2WHU
DownloadVisualize
BU of 2whu by Molmil
Fluorescent Protein mKeima at pH 8.0
Descriptor: LARGE STOKES SHIFT FLUORESCENT PROTEIN
Authors:Violot, S, Carpentier, P, Blanchoin, L, Bourgeois, D.
Deposit date:2009-05-06
Release date:2009-08-11
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Reverse Ph-Dependence of Chromophore Protonation Explains the Large Stokes Shift of the Red Fluorescent Protein Mkeima
J.Am.Chem.Soc., 131, 2009
2VZX
DownloadVisualize
BU of 2vzx by Molmil
Structural and spectroscopic characterization of photoconverting fluorescent protein Dendra2
Descriptor: GLYCEROL, Green fluorescent protein, TETRAETHYLENE GLYCOL
Authors:Adam, V, Nienhaus, K, Bourgeois, D, Nienhaus, G.U.
Deposit date:2008-08-06
Release date:2009-06-09
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Basis of Enhanced Photoconversion Yield in Green Fluorescent Protein-Like Protein Dendra2.
Biochemistry, 48, 2009
2QT2
DownloadVisualize
BU of 2qt2 by Molmil
Cyclized-Dehydrated Intermediate of GFP Variant Q183E in Chromophore Maturation
Descriptor: 1,2-ETHANEDIOL, Green fluorescent protein
Authors:Wood, T.I, Barondeau, D.P, Hitomi, C, Tainer, J.A, Getzoff, E.D.
Deposit date:2007-07-31
Release date:2009-04-21
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.31 Å)
Cite:Kinetically Isolated Reaction Intermediates Provide Structural Characterization of the Green Fluorescence Protein Fluorophore Biosynthesis Pathway
To be Published
2QZ0
DownloadVisualize
BU of 2qz0 by Molmil
Mature Q183E variant of Green Fluorescent Protein Chromophore
Descriptor: Green fluorescent protein, MAGNESIUM ION
Authors:Wood, T.I, Barondeau, D.P, Hitomi, C, Tainer, J.A, Getzoff, E.D.
Deposit date:2007-08-15
Release date:2009-04-21
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Kinetically Isolated Reaction Intermediates Provide Structural Characterization of the GFP Fluorophore Biosynthesis Pathway
To be Published
2QRF
DownloadVisualize
BU of 2qrf by Molmil
Green Fluorescent Protein: Cyclized-only Intermediate of Chromophore Maturation in the Q183E variant
Descriptor: 1,2-ETHANEDIOL, Green fluorescent protein, MAGNESIUM ION
Authors:Wood, T.I, Barondeau, D.P, Hitomi, C, Tainer, J.A, Getzoff, E.D.
Deposit date:2007-07-28
Release date:2009-04-21
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Green Fluorescent Protein Chromophore - Cyclized Intermediate
To be Published

227344

PDB entries from 2024-11-13

PDB statisticsPDBj update infoContact PDBjnumon