Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

6QE4
DownloadVisualize
BU of 6qe4 by Molmil
Re-refinement of 5OLI human IBA57-I3C
Descriptor: 5-amino-2,4,6-triiodobenzene-1,3-dicarboxylic acid, Putative transferase CAF17, mitochondrial
Authors:Calderone, V, Ciofi-Baffoni, S, Gourdoupis, S, Banci, L, Nasta, V.
Deposit date:2019-01-04
Release date:2019-03-13
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:In-house high-energy-remote SAD phasing using the magic triangle: how to tackle the P1 low symmetry using multiple orientations of the same crystal of human IBA57 to increase the multiplicity.
Acta Crystallogr D Struct Biol, 75, 2019
5YIA
DownloadVisualize
BU of 5yia by Molmil
Crystal Structure of KNI-10343 bound Plasmepsin II (PMII) from Plasmodium falciparum
Descriptor: (4R)-3-[(2S,3S)-3-[[(2R)-2-[2-(4-hydroxyphenyl)ethanoylamino]-3-methylsulfanyl-propanoyl]amino]-2-oxidanyl-4-phenyl-butanoyl]-5,5-dimethyl-N-[(1S,2R)-2-oxidanyl-2,3-dihydro-1H-inden-1-yl]-1,3-thiazolidine-4-carboxamide, 3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMONIO]-1-PROPANESULFONATE, GLYCEROL, ...
Authors:Rathore, I, Mishra, V, Bhaumik, P.
Deposit date:2017-10-03
Release date:2018-07-11
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Deciphering the mechanism of potent peptidomimetic inhibitors targeting plasmepsins - biochemical and structural insights.
Febs J., 285, 2018
5KK3
DownloadVisualize
BU of 5kk3 by Molmil
Atomic Resolution Structure of Monomorphic AB42 Amyloid Fibrils
Descriptor: Beta-amyloid protein 42
Authors:Colvin, M.T, Silvers, R, Zhe Ni, Q, Can, T.V, Sergeyev, I, Rosay, M, Donovan, K.J, Michael, B, Wall, J, Linse, S, Griffin, R.G.
Deposit date:2016-06-20
Release date:2016-07-13
Last modified:2024-05-01
Method:SOLID-STATE NMR
Cite:Atomic Resolution Structure of Monomorphic A beta 42 Amyloid Fibrils.
J.Am.Chem.Soc., 138, 2016
6DSS
DownloadVisualize
BU of 6dss by Molmil
Re-refinement of P. falciparum orotidine 5'-monophosphate decarboxylase
Descriptor: Orotidine 5'-monophosphate decarboxylase, URIDINE-5'-MONOPHOSPHATE
Authors:Brandt, G.S, Novak, W.R.P.
Deposit date:2018-06-14
Release date:2018-10-17
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.599 Å)
Cite:Re-refinement of Plasmodium falciparum orotidine 5'-monophosphate decarboxylase provides a clearer picture of an important malarial drug target.
Acta Crystallogr F Struct Biol Commun, 74, 2018
6DSQ
DownloadVisualize
BU of 6dsq by Molmil
Re-refinement of P. falciparum orotidine 5'-monophosphate decarboxylase
Descriptor: Orotidine 5'-monophosphate decarboxylase
Authors:Brandt, G.S, Novak, W.R.P.
Deposit date:2018-06-14
Release date:2018-10-17
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Re-refinement of Plasmodium falciparum orotidine 5'-monophosphate decarboxylase provides a clearer picture of an important malarial drug target.
Acta Crystallogr F Struct Biol Commun, 74, 2018
6DSR
DownloadVisualize
BU of 6dsr by Molmil
Re-refinement of P. falciparum orotidine 5'-monophosphate decarboxylase
Descriptor: Orotidine 5'-monophosphate decarboxylase, URIDINE-5'-MONOPHOSPHATE
Authors:Brandt, G.S, Novak, W.R.P.
Deposit date:2018-06-14
Release date:2018-10-17
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.597 Å)
Cite:Re-refinement of Plasmodium falciparum orotidine 5'-monophosphate decarboxylase provides a clearer picture of an important malarial drug target.
Acta Crystallogr F Struct Biol Commun, 74, 2018
4EW9
DownloadVisualize
BU of 4ew9 by Molmil
The liganded structure of C. bescii family 3 pectate lyase
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 4-deoxy-beta-L-threo-hex-4-enopyranuronic acid-(1-4)-alpha-D-galactopyranuronic acid, ACETATE ION, ...
Authors:Alahuhta, P.M, Lunin, V.V.
Deposit date:2012-04-26
Release date:2013-03-20
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The structure and mode of action of Caldicellulosiruptor bescii family 3 pectate lyase in biomass deconstruction.
Acta Crystallogr. D Biol. Crystallogr., 69, 2013
6G7Z
DownloadVisualize
BU of 6g7z by Molmil
Lariat-capping ribozyme with a shortened DP2 stem loop
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Lariat-capping ribozyme, MAGNESIUM ION
Authors:Masquida, B, Meyer, M, Olieric, V.
Deposit date:2018-04-06
Release date:2018-12-05
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.33595 Å)
Cite:Conformational adaptation of UNCG loops upon crowding.
Rna, 25, 2019
9NXG
DownloadVisualize
BU of 9nxg by Molmil
An alpha-l-arabinofuranosidase (AtAbf43C) from Acetivibrio thermocellus DSM1313
Descriptor: GLYCEROL, Glycoside hydrolase family 43, MAGNESIUM ION
Authors:Galindo, J.L, Jeffrey, P.D, Conway, J.M.
Deposit date:2025-03-25
Release date:2025-08-20
Last modified:2025-10-15
Method:X-RAY DIFFRACTION (1.32 Å)
Cite:Functional and structural characterization of AtAbf43C: an exo-1,5-alpha-L-arabinofuranosidase from Acetivibrio thermocellus DSM1313.
Biochem.J., 482, 2025
9NXI
DownloadVisualize
BU of 9nxi by Molmil
CBM42 domain of alpha-l-arabinofuranosidase (AtAbf43C) from Acetivibrio thermocellus DSM1313
Descriptor: GLYCEROL, Glycoside hydrolase family 43
Authors:Galindo, J.L, Jeffrey, P.D, Conway, J.M.
Deposit date:2025-03-25
Release date:2025-08-20
Last modified:2025-10-15
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Functional and structural characterization of AtAbf43C: an exo-1,5-alpha-L-arabinofuranosidase from Acetivibrio thermocellus DSM1313.
Biochem.J., 482, 2025
6G30
DownloadVisualize
BU of 6g30 by Molmil
Crystal structure of the p97 D2 domain in a helical split-washer conformation
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, ADENOSINE-5'-DIPHOSPHATE, DIMETHYL SULFOXIDE, ...
Authors:Stach, L, Morgan, R.M.L, Freemont, P.S.
Deposit date:2018-03-23
Release date:2019-04-10
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.418 Å)
Cite:Crystal structure of the catalytic D2 domain of the AAA+ ATPase p97 reveals a putative helical split-washer-type mechanism for substrate unfolding.
Febs Lett., 594, 2020
8HIT
DownloadVisualize
BU of 8hit by Molmil
Crystal structure of anti-CTLA-4 humanized IgG1 MAb--JS007 in complex with human CTLA-4
Descriptor: Cytotoxic T-lymphocyte protein 4, JS007-VH, JS007-VL
Authors:Tan, S, Shi, Y, Wang, Q, Gao, G.F, Guan, J, Chai, Y, Qi, J.
Deposit date:2022-11-21
Release date:2023-02-01
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Characterization of the high-affinity anti-CTLA-4 monoclonal antibody JS007 for immune checkpoint therapy of cancer.
Mabs, 15, 2023
6PBR
DownloadVisualize
BU of 6pbr by Molmil
Catalytic domain of E.coli dihydrolipoamide succinyltransferase in I4 space group
Descriptor: Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, SODIUM ION
Authors:Andi, B, Soares, A.S, Shi, W, Fuchs, M.R, McSweeney, S, Liu, Q.
Deposit date:2019-06-14
Release date:2019-06-26
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of the dihydrolipoamide succinyltransferase catalytic domain from Escherichia coli in a novel crystal form: a tale of a common protein crystallization contaminant.
Acta Crystallogr.,Sect.F, 75, 2019
7A5U
DownloadVisualize
BU of 7a5u by Molmil
Structure of E37A BlaC from Mycobacterium tuberculosis
Descriptor: Beta-lactamase
Authors:Chikunova, A, Ahmad, M.U, Perrakis, A, Ubbink, M.
Deposit date:2020-08-21
Release date:2021-04-14
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Conserved residues Glu37 and Trp229 play an essential role in protein folding of beta-lactamase.
Febs J., 288, 2021
6S5V
DownloadVisualize
BU of 6s5v by Molmil
Crystal structure of the Cap-Midlink region of the H5N1 Influenza A virus polymerase in complex with a Cap-domain binding analogue
Descriptor: (1~{S},2~{S},3~{S},6~{R})-2-[[2-[5,7-bis(fluoranyl)-1~{H}-indol-3-yl]-5-fluoranyl-pyrimidin-4-yl]amino]-3,6-dimethyl-cyclohexane-1-carboxylic acid, GLYCEROL, POTASSIUM ION, ...
Authors:Keown, J.R, Fodor, E, Grimes, J.M.
Deposit date:2019-07-02
Release date:2019-11-06
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Design, Synthesis, and Biological Evaluation of Novel Indoles Targeting the Influenza PB2 Cap Binding Region.
J.Med.Chem., 62, 2019
6GDX
DownloadVisualize
BU of 6gdx by Molmil
Structure of CutA from Synechococcus elongatus PCC7942 complexed with 3 molecules of Bis-Tris
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Periplasmic divalent cation tolerance protein
Authors:Tremino, L, Rubio, V.
Deposit date:2018-04-24
Release date:2019-05-08
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.17 Å)
Cite:Functional and structural characterization of PII-like protein CutA does not support involvement in heavy metal tolerance and hints at a small-molecule carrying/signaling role.
Febs J., 2020
6G2V
DownloadVisualize
BU of 6g2v by Molmil
Crystal structure of the p97 D2 domain in a helical split-washer conformation
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, ADENOSINE-5'-DIPHOSPHATE, DIMETHYL SULFOXIDE, ...
Authors:Stach, L, Morgan, R.M.L, Freemont, P.S.
Deposit date:2018-03-23
Release date:2019-04-10
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.903 Å)
Cite:Crystal structure of the catalytic D2 domain of the AAA+ ATPase p97 reveals a putative helical split-washer-type mechanism for substrate unfolding.
Febs Lett., 594, 2020
6G4B
DownloadVisualize
BU of 6g4b by Molmil
Crystal structure of the omega transaminase from Pseudomonas jessenii in the apo form, crystallized from succinate
Descriptor: Aspartate aminotransferase family protein, GLYCEROL, SUCCINIC ACID
Authors:Rozeboom, H.J, Janssen, D.B.
Deposit date:2018-03-27
Release date:2019-04-10
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Biochemical properties of a Pseudomonas aminotransferase involved in caprolactam metabolism.
Febs J., 286, 2019
6G2W
DownloadVisualize
BU of 6g2w by Molmil
Crystal structure of the p97 D2 domain in a helical split-washer conformation
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, ADENOSINE-5'-DIPHOSPHATE, DIMETHYL SULFOXIDE, ...
Authors:Stach, L, Morgan, R.M.L, Freemont, P.S.
Deposit date:2018-03-23
Release date:2019-04-10
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.678 Å)
Cite:Crystal structure of the catalytic D2 domain of the AAA+ ATPase p97 reveals a putative helical split-washer-type mechanism for substrate unfolding.
Febs Lett., 594, 2020
2WTM
DownloadVisualize
BU of 2wtm by Molmil
Est1E from Butyrivibrio proteoclasticus
Descriptor: EST1E, GLYCEROL, PHOSPHATE ION
Authors:Goldstone, D.C, Arcus, V.L.
Deposit date:2009-09-17
Release date:2010-01-19
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural and Functional Characterization of a Promiscuous Feruloyl Esterase (Est1E) from the Rumen Bacterium Butyrivibrio Proteoclasticus.
Proteins, 78, 2010
7PRC
DownloadVisualize
BU of 7prc by Molmil
PHOTOSYNTHETIC REACTION CENTER FROM RHODOPSEUDOMONAS VIRIDIS (DG-420315 (TRIAZINE) COMPLEX)
Descriptor: 15-cis-1,2-dihydroneurosporene, 2-CHLORO-4-ETHYLAMINO-6-(R(+)-2'-CYANO-4-BUTYLAMINO)-1,3,5-TRIAZINE, BACTERIOCHLOROPHYLL B, ...
Authors:Lancaster, C.R.D, Michel, H.
Deposit date:1997-08-01
Release date:1999-04-06
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Refined crystal structures of reaction centres from Rhodopseudomonas viridis in complexes with the herbicide atrazine and two chiral atrazine derivatives also lead to a new model of the bound carotenoid.
J.Mol.Biol., 286, 1999
6G2Y
DownloadVisualize
BU of 6g2y by Molmil
Crystal structure of the p97 D2 domain in a helical split-washer conformation
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, ADENOSINE-5'-DIPHOSPHATE, DIMETHYL SULFOXIDE, ...
Authors:Stach, L, Morgan, R.M.L, Freemont, P.S.
Deposit date:2018-03-23
Release date:2019-04-10
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.153 Å)
Cite:Crystal structure of the catalytic D2 domain of the AAA+ ATPase p97 reveals a putative helical split-washer-type mechanism for substrate unfolding.
Febs Lett., 594, 2020
6G4D
DownloadVisualize
BU of 6g4d by Molmil
Crystal structure of the omega TRANSAMINASE FROM PSEUDOMONAS Jessenii in complex with PLP
Descriptor: Aspartate aminotransferase family protein, GLYCEROL, PYRIDOXAL-5'-PHOSPHATE
Authors:Rozeboom, H.J, Janssen, D.B.
Deposit date:2018-03-27
Release date:2019-04-10
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Biochemical properties of a Pseudomonas aminotransferase involved in caprolactam metabolism.
Febs J., 286, 2019
8HFD
DownloadVisualize
BU of 8hfd by Molmil
Crystal structure of allantoinase from E. coli BL21
Descriptor: Allantoinase, DI(HYDROXYETHYL)ETHER, ZINC ION
Authors:Lin, E.S, Huang, H.Y, Yang, P.C, Liu, H.W, Huang, C.Y.
Deposit date:2022-11-10
Release date:2023-10-18
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Crystal Structure of Allantoinase from Escherichia coli BL21: A Molecular Insight into a Role of the Active Site Loops in Catalysis.
Molecules, 28, 2023
5LIT
DownloadVisualize
BU of 5lit by Molmil
Structure of the DNA duplex d(AAATTT)2 with the potential antiparasitic drug 6XV at 1.25 A resolution
Descriptor: 4-((4,5-dihydro-1H-imidazol-2-yl)amino)-N-(4-((4,5-dihydro-1H-imidazol-2-yl)amino)phenyl)benzamide dihydrochloride, DNA (5'-D(*AP*AP*AP*TP*TP*T)-3'), MAGNESIUM ION
Authors:Millan, C.R, Dardonville, C, de Koning, H.P, Saperas, N, Lourdes Campos, J.
Deposit date:2016-07-15
Release date:2017-06-14
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Functional and structural analysis of AT-specific minor groove binders that disrupt DNA-protein interactions and cause disintegration of the Trypanosoma brucei kinetoplast.
Nucleic Acids Res., 45, 2017

245663

PDB entries from 2025-12-03

PDB statisticsPDBj update infoContact PDBjnumon