PDB: 659 resultsInfo pagesStatus searchChemie searchBIRD

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7P72	The PDZ domain of SNX27 complexed with the PDZ-binding motif of MERS-E Descriptor: CALCIUM ION, Envelope small membrane protein, GLYCEROL, ... Authors: Gogl, G, Cousido-Siah, A, Trave, G. Deposit date: 2021-07-19 Release date: 2022-07-27 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (2.15 Å) Cite: Quantitative fragmentomics allow affinity mapping of interactomes. Nat Commun, 13, 2022
7P73	The PDZ domain of SYNJ2BP complexed with the PDZ-binding motif of HTLV1-TAX1 Descriptor: CALCIUM ION, GLYCEROL, Protein Tax-1, ... Authors: Gogl, G, Cousido-Siah, A, Trave, G. Deposit date: 2021-07-19 Release date: 2022-07-27 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.85 Å) Cite: Quantitative fragmentomics allow affinity mapping of interactomes. Nat Commun, 13, 2022
7P71	The PDZ domain of MAGI1_2 complexed with the PDZ-binding motif of HPV35-E6 Descriptor: CALCIUM ION, CITRIC ACID, GLYCEROL, ... Authors: Gogl, G, Cousido-Siah, A, Trave, G. Deposit date: 2021-07-19 Release date: 2022-07-27 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (2.6 Å) Cite: Quantitative fragmentomics allow affinity mapping of interactomes. Nat Commun, 13, 2022
7P70	The PDZ-domain of SNTB1 complexed with the PDZ-binding motif of HPV35-E6 Descriptor: Beta-1-syntrophin,Annexin A2, CALCIUM ION, GLYCEROL, ... Authors: Gogl, G, Cousido-Siah, A, Trave, G. Deposit date: 2021-07-19 Release date: 2022-07-27 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (2 Å) Cite: Quantitative fragmentomics allow affinity mapping of interactomes. Nat Commun, 13, 2022
7P74	The PDZ domain of SYNJ2BP complexed with the phosphorylated PDZ-binding motif of RSK1 Descriptor: CALCIUM ION, GLYCEROL, Ribosomal protein S6 kinase alpha-1, ... Authors: Gogl, G, Cousido-Siah, A, Trave, G. Deposit date: 2021-07-19 Release date: 2022-07-27 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Quantitative fragmentomics allow affinity mapping of interactomes. Nat Commun, 13, 2022
7PCB	The PDZ domain of SNX27 fused with ANXA2 Descriptor: CALCIUM ION, GLYCEROL, Sorting nexin-27,Annexin A2 Authors: Cousido-Siah, A, Trave, G, Gogl, G. Deposit date: 2021-08-03 Release date: 2022-04-20 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (2 Å) Cite: A scalable strategy to solve structures of PDZ domains and their complexes. Acta Crystallogr D Struct Biol, 78, 2022
7PC9	The PDZ domain of SYNJ2BP complexed with the PDZ-binding motif of HTLV1-TAX1 Descriptor: CALCIUM ION, Protein Tax-1, Synaptojanin-2-binding protein,Annexin A2 Authors: Cousido-Siah, A, Trave, G, Gogl, G. Deposit date: 2021-08-03 Release date: 2022-04-20 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (2.4 Å) Cite: A scalable strategy to solve structures of PDZ domains and their complexes. Acta Crystallogr D Struct Biol, 78, 2022
7PC3	The second PDZ domain of DLG1 complexed with the PDZ-binding motif of HTLV1-TAX1 Descriptor: CALCIUM ION, Disks large homolog 1,Annexin A2, GLYCEROL, ... Authors: Cousido-Siah, A, Trave, G, Gogl, G. Deposit date: 2021-08-03 Release date: 2022-04-20 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (1.95 Å) Cite: A scalable strategy to solve structures of PDZ domains and their complexes. Acta Crystallogr D Struct Biol, 78, 2022
7PC5	The third PDZ domain of PDZD7 complexed with the PDZ-binding motif of EXOC4 Descriptor: CALCIUM ION, Exocyst complex component 4, GLYCEROL, ... Authors: Cousido-Siah, A, Trave, G, Gogl, G. Deposit date: 2021-08-03 Release date: 2022-04-20 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (1.7 Å) Cite: A scalable strategy to solve structures of PDZ domains and their complexes. Acta Crystallogr D Struct Biol, 78, 2022
7PC7	The PDZ domain of SNTG1 complexed with the acetylated PDZ-binding motif of PTEN Descriptor: CALCIUM ION, GLYCEROL, Gamma-1-syntrophin,Annexin A2, ... Authors: Cousido-Siah, A, Trave, G, Gogl, G. Deposit date: 2021-08-03 Release date: 2022-04-20 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (2.1 Å) Cite: A scalable strategy to solve structures of PDZ domains and their complexes. Acta Crystallogr D Struct Biol, 78, 2022
7PC8	The PDZ domain of SNTG1 complexed with the phosphomimetic mutant PDZ-binding motif of RSK1 Descriptor: CALCIUM ION, GLYCEROL, Gamma-1-syntrophin,Annexin A2, ... Authors: Cousido-Siah, A, Trave, G, Gogl, G. Deposit date: 2021-08-03 Release date: 2022-04-20 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (2.5 Å) Cite: A scalable strategy to solve structures of PDZ domains and their complexes. Acta Crystallogr D Struct Biol, 78, 2022
7PC4	The PDZ domain of SNTB1 complexed with the PDZ-binding motif of HTLV1-TAX1 Descriptor: 1,2-ETHANEDIOL, Beta-1-syntrophin,Annexin A2, CALCIUM ION, ... Authors: Cousido-Siah, A, Trave, G, Gogl, G. Deposit date: 2021-08-03 Release date: 2022-04-20 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (2.3 Å) Cite: A scalable strategy to solve structures of PDZ domains and their complexes. Acta Crystallogr D Struct Biol, 78, 2022
8AEL	SYNJ2BP complex with a synthetic Vangl2 peptide (3mer). Descriptor: CALCIUM ION, GLY-GLY-GLY-THR-SER-VAL, GLYCEROL, ... Authors: Carrasco, K, Cousido Siah, A, Gogl, G, Betzi, S, McEwen, A, Kostmann, C, Trave, G. Deposit date: 2022-07-13 Release date: 2023-08-16 Method: X-RAY DIFFRACTION (2.2 Å) Cite: SYNJ2BP PDZ domain in complex with a synthetic Vangl2 peptide. To Be Published
3K1R	Structure of harmonin NPDZ1 in complex with the SAM-PBM of Sans Descriptor: Harmonin, Usher syndrome type-1G protein Authors: Pan, L, Yan, J, Zhang, M. Deposit date: 2009-09-28 Release date: 2010-01-26 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2.3 Å) Cite: The structure of the harmonin/sans complex reveals an unexpected interaction mode of the two Usher syndrome proteins Proc.Natl.Acad.Sci.USA, 107, 2010
3OTP	Crystal structure of the DegP dodecamer with a model substrate Descriptor: Lysozyme C, Protease do Authors: Kim, S, Grant, R.A, Sauer, R.T. Deposit date: 2010-09-13 Release date: 2011-01-19 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (3.76 Å) Cite: Covalent Linkage of Distinct Substrate Degrons Controls Assembly and Disassembly of DegP Proteolytic Cages. Cell(Cambridge,Mass.), 145, 2011
3HVQ	Crystal structure of a complex between Protein Phosphatase 1 alpha (PP1) and the PP1 binding and PDZ domains of Neurabin Descriptor: GLYCEROL, MANGANESE (II) ION, Neurabin-1, ... Authors: Critton, D.A, Ragusa, M.J, Page, R, Peti, W. Deposit date: 2009-06-16 Release date: 2010-03-23 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Spinophilin directs protein phosphatase 1 specificity by blocking substrate binding sites. Nat.Struct.Mol.Biol., 17, 2010
3EGG	Crystal structure of a complex between Protein Phosphatase 1 alpha (PP1) and the PP1 binding and PDZ domains of Spinophilin Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLYCEROL, MANGANESE (II) ION, ... Authors: Ragusa, M.J, Page, R, Peti, W. Deposit date: 2008-09-10 Release date: 2010-03-23 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.85 Å) Cite: Spinophilin directs protein phosphatase 1 specificity by blocking substrate binding sites. Nat.Struct.Mol.Biol., 17, 2010
3GCO	Crystal structure of DegS H198P/D320A mutant modified by DFP in complex with DNRDGNVYQF OMP peptide Descriptor: DNRDGNVYQF peptide, Protease degS Authors: Sohn, J, Grant, R.A, Sauer, R.T. Deposit date: 2009-02-22 Release date: 2009-03-31 Last modified: 2021-10-20 Method: X-RAY DIFFRACTION (2.798 Å) Cite: OMP peptides activate the DegS stress-sensor protease by a relief of inhibition mechanism. Structure, 17, 2009
3GDS	Crystal structure of DegS H198P/D320A mutant modified by DFP in complex with DNRDGNVYYF peptide Descriptor: DNRDGNVYYF peptide, Protease degS Authors: Sohn, J, Grant, R.A, Sauer, R.T. Deposit date: 2009-02-24 Release date: 2009-03-31 Last modified: 2021-10-20 Method: X-RAY DIFFRACTION (2.85 Å) Cite: OMP peptides activate the DegS stress-sensor protease by a relief of inhibition mechanism. Structure, 17, 2009
3EGH	Crystal structure of a complex between Protein Phosphatase 1 alpha (PP1), the PP1 binding and PDZ domains of Spinophilin and the small natural molecular toxin Nodularin-R Descriptor: GLYCEROL, MANGANESE (II) ION, Serine/threonine-protein phosphatase PP1-alpha catalytic subunit, ... Authors: Ragusa, M.J, Page, R, Peti, W. Deposit date: 2008-09-10 Release date: 2010-03-23 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (2 Å) Cite: Spinophilin directs protein phosphatase 1 specificity by blocking substrate binding sites. Nat.Struct.Mol.Biol., 17, 2010
5F3X	Crystal structure of Harmonin NPDZ1 in complex with ANKS4B SAM-PBM Descriptor: Ankyrin repeat and SAM domain-containing protein 4B, CHLORIDE ION, Harmonin Authors: Li, J, He, Y, Lu, Q, Zhang, M. Deposit date: 2015-12-03 Release date: 2016-03-16 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (2.649 Å) Cite: Mechanistic Basis of Organization of the Harmonin/USH1C-Mediated Brush Border Microvilli Tip-Link Complex Dev.Cell, 36, 2016
3GDU	Crystal structure of DegS H198P/D320A mutant modified by DFP and in complex with YRF peptide Descriptor: DegS protease, YRF peptide Authors: Sohn, J, Grant, R.A, Sauer, R.T. Deposit date: 2009-02-24 Release date: 2009-03-31 Last modified: 2021-10-20 Method: X-RAY DIFFRACTION (3 Å) Cite: OMP peptides activate the DegS stress-sensor protease by a relief of inhibition mechanism. Structure, 17, 2009
3GCN	Crystal structure of DegS H198P/D320A mutant modified by DFP in complex with OMP peptide (YQF) Descriptor: Protease degS, YQF peptide Authors: Sohn, J, Sauer, R.T, Grant, R.A. Deposit date: 2009-02-22 Release date: 2009-03-31 Last modified: 2021-10-20 Method: X-RAY DIFFRACTION (3.002 Å) Cite: Mechanisms of allosteric activation of the DegS protease by OMP-peptide binding and protein-substrate binding To be Published
3GDV	Crystal structure of DegS H198P/D320A mutant modified by DFP and in complex with YQF peptide Descriptor: DegS protease, YQF peptide Authors: Sohn, J, Grant, R.A, Sauer, R.T. Deposit date: 2009-02-24 Release date: 2009-03-31 Last modified: 2021-10-20 Method: X-RAY DIFFRACTION (2.489 Å) Cite: OMP peptides activate the DegS stress-sensor protease by a relief of inhibition mechanism. Structure, 17, 2009
1NF3	Structure of Cdc42 in a complex with the GTPase-binding domain of the cell polarity protein, Par6 Descriptor: G25K GTP-binding protein, placental isoform, MAGNESIUM ION, ... Authors: Garrard, S.M, Capaldo, C.T, Gao, L, Rosen, M.K, Macara, I.G, Tomchick, D.R. Deposit date: 2002-12-12 Release date: 2003-03-04 Last modified: 2023-08-16 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Structure of Cdc42 in a complex with the GTPase-binding domain of the cell polarity protein, Par6 Embo J., 22, 2003

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