Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3EON
DownloadVisualize
BU of 3eon by Molmil
2.55A crystal structure of native glutaryl-coa dehydrogenase from Burkholderia pseudomallei in complex with a small molecule
Descriptor: (3,5-difluorophenyl)methanol, Glutaryl-CoA dehydrogenase
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2008-09-28
Release date:2008-10-21
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Probing conformational states of glutaryl-CoA dehydrogenase by fragment screening.
Acta Crystallogr.,Sect.F, 67, 2011
3EN4
DownloadVisualize
BU of 3en4 by Molmil
Targeted polypharmacology: crystal structure of the c-Src kinase domain in complex with PP121, a multitargeted kinase inhibitor
Descriptor: 1-cyclopentyl-3-(1H-pyrrolo[2,3-b]pyridin-5-yl)-1H-pyrazolo[3,4-d]pyrimidin-4-amine, Proto-oncogene tyrosine-protein kinase Src
Authors:Blair, J.A, Apsel, B, Knight, Z.A, Shokat, K.M.
Deposit date:2008-09-25
Release date:2008-10-14
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Targeted polypharmacology: discovery of dual inhibitors of tyrosine and phosphoinositide kinases.
Nat.Chem.Biol., 4, 2008
3ETI
DownloadVisualize
BU of 3eti by Molmil
Structure of a cubic crystal form of X (ADRP) domain from FCoV
Descriptor: macro domain of Non-structural protein 3
Authors:Wojdyla, J.A, Manolaridis, I, Tucker, P.A.
Deposit date:2008-10-08
Release date:2009-10-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of the X (ADRP) domain of nsp3 from feline coronavirus
Acta Crystallogr.,Sect.D, 65, 2009
3EL4
DownloadVisualize
BU of 3el4 by Molmil
Crystal structure of inhibitor saquinavir (SQV) complexed with the multidrug HIV-1 protease variant L63P/V82T/I84V
Descriptor: (2S)-N-[(2S,3R)-4-[(2S,3S,4aS,8aS)-3-(tert-butylcarbamoyl)-3,4,4a,5,6,7,8,8a-octahydro-1H-isoquinolin-2-yl]-3-hydroxy-1 -phenyl-butan-2-yl]-2-(quinolin-2-ylcarbonylamino)butanediamide, ACETATE ION, Protease
Authors:Prabu-Jeyabalan, M, King, N, Schiffer, C.
Deposit date:2008-09-19
Release date:2009-09-01
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Extreme Entropy-Enthalpy Compensation in a Drug-Resistant Variant of HIV-1 Protease.
Acs Chem.Biol., 7, 2012
3EOO
DownloadVisualize
BU of 3eoo by Molmil
2.9A crystal structure of methyl-isocitrate lyase from Burkholderia pseudomallei
Descriptor: Methylisocitrate lyase
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2008-09-28
Release date:2008-10-21
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structures of isocitrate lyase from Brucella melitensis
To be Published
3ESS
DownloadVisualize
BU of 3ess by Molmil
Catalytic fragment of Cholix toxin from Vibrio Cholerae in complex with the 1,8-Naphthalimide inhibitor
Descriptor: 1H-benzo[de]isoquinoline-1,3(2H)-dione, Cholix toxin
Authors:Merrill, A.R, Jorgensen, R.
Deposit date:2008-10-06
Release date:2009-09-15
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.191 Å)
Cite:Yeast as a tool for characterizing mono-ADP-ribosyltransferase toxins
Fems Microbiol.Lett., 300, 2009
3EVQ
DownloadVisualize
BU of 3evq by Molmil
Crystal structure of Staphylococcal nuclease variant Delta+PHS L25E at cryogenic temperature
Descriptor: CALCIUM ION, THYMIDINE-3',5'-DIPHOSPHATE, Thermonuclease
Authors:Robinson, A.C, Schlessman, J.L, Garcia-Moreno, E.B.
Deposit date:2008-10-13
Release date:2008-11-04
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of D+PHS L25E at cryogenic temperature
To be Published
3ERQ
DownloadVisualize
BU of 3erq by Molmil
Crystal structure of Staphylococcal nuclease variant L25K at cryogenic temperature
Descriptor: CALCIUM ION, THYMIDINE-3',5'-DIPHOSPHATE, Thermonuclease
Authors:Robinson, A.C, Schlessman, J.L, Garcia-Moreno, E.B.
Deposit date:2008-10-02
Release date:2008-11-04
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural consequences of the ionization of lysine residues at 25 internal positions in a protein.
To be Published
2IIU
DownloadVisualize
BU of 2iiu by Molmil
Crystal structure of a putative PhoU-like phosphate regulatory protein (NP_719307.1) from Shewanella oneidensis MR-1 at 2.28 A resolution.
Descriptor: 1,2-ETHANEDIOL, Hypothetical protein
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2006-09-28
Release date:2006-10-17
Last modified:2023-01-25
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Crystal structure of conserved hypothetical protein (NP_719307.1) from Shewanella Oneidensis MR-1 at 2.28 A resolution
To be published
2IFU
DownloadVisualize
BU of 2ifu by Molmil
Crystal Structure of a Gamma-SNAP from Danio rerio
Descriptor: SULFATE ION, gamma-snap
Authors:Bitto, E, Wesenberg, G.E, Phillips Jr, G.N, Mccoy, J.G, Bingman, C.A, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2006-09-21
Release date:2006-10-10
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure and dynamics of gamma-SNAP: insight into flexibility of proteins from the SNAP family.
Proteins, 70, 2008
3EVN
DownloadVisualize
BU of 3evn by Molmil
CRYSTAL STRUCTURE OF putative oxidoreductase from Streptococcus agalactiae 2603V/r
Descriptor: Oxidoreductase, Gfo/Idh/MocA family
Authors:Malashkevich, V.N, Toro, R, Meyer, A.J, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-10-13
Release date:2008-10-21
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:CRYSTAL STRUCTURE OF putative Gfo/Idh/MocA family oxidoreductase from Streptococcus agalactiae 2603V/r
To be Published
3ETZ
DownloadVisualize
BU of 3etz by Molmil
Crystal structure of bacterial adhesin FadA L76A mutant
Descriptor: Adhesin A
Authors:Nithianantham, S, Xu, M, Wu, N, Shoham, M, Han, Y.W.
Deposit date:2008-10-08
Release date:2008-12-02
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of FadA Adhesin from Fusobacterium nucleatum Reveals a Novel Oligomerization Motif, the Leucine Chain.
J.Biol.Chem., 284, 2009
3EXT
DownloadVisualize
BU of 3ext by Molmil
Crystal structure of KGPDC from Streptococcus mutans
Descriptor: MAGNESIUM ION, RmpD (Hexulose-6-phosphate synthase)
Authors:Liu, X, Li, G.L, Li, L.F, Su, X.D.
Deposit date:2008-10-17
Release date:2009-08-25
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Open-closed conformational change revealed by the crystal structures of 3-keto-L-gulonate 6-phosphate decarboxylase from Streptococcus mutans
Biochem.Biophys.Res.Commun., 381, 2009
3F10
DownloadVisualize
BU of 3f10 by Molmil
Crystal structure of Clostridium Acetobutylicum 8-oxoguanine DNA glycosylase in complex with 8-oxoguanosine
Descriptor: 1,2-ETHANEDIOL, 2'-DEOXY-8-OXOGUANOSINE, 8-oxoguanine-DNA-glycosylase
Authors:Faucher, F, Doublie, S.
Deposit date:2008-10-27
Release date:2009-04-07
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural characterization of Clostridium acetobutylicum 8-oxoguanine DNA glycosylase in its apo form and in complex with 8-oxodeoxyguanosine.
J.Mol.Biol., 387, 2009
3F3T
DownloadVisualize
BU of 3f3t by Molmil
Kinase domain of cSrc in complex with inhibitor RL38 (Type III)
Descriptor: 1-[1-(3-aminophenyl)-3-tert-butyl-1H-pyrazol-5-yl]-3-naphthalen-1-ylurea, Proto-oncogene tyrosine-protein kinase Src
Authors:Gruetter, C, Klueter, S, Getlik, M, Rauh, D.
Deposit date:2008-10-31
Release date:2009-03-03
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A new screening assay for allosteric inhibitors of cSrc
Nat.Chem.Biol., 5, 2009
3EXX
DownloadVisualize
BU of 3exx by Molmil
Structure of the T6 human insulin derivative with nickel at 1.35 A resolution
Descriptor: Insulin A chain, Insulin B chain, NICKEL (II) ION, ...
Authors:Prugovecki, B, Matkovic-Calogovic, D.
Deposit date:2008-10-17
Release date:2009-05-19
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structure of the T6 Human Nickel Insulin Derivative at 1.35 A Resolution.
CROATICA CHEMICA ACTA, 82, 2009
3EY4
DownloadVisualize
BU of 3ey4 by Molmil
Further studies with the 2-amino-1,3-thiazol-4(5H)-one class of 11-hydroxysteroid dehydrogenase type 1 (11-HSD1) inhibitors: Reducing pregnane X receptor (PXR) activity and exploring activity in a monkey pharmacodynamic model
Descriptor: (5S)-2-{[(1S)-1-(4-fluorophenyl)ethyl]amino}-5-(1-hydroxy-1-methylethyl)-5-methyl-1,3-thiazol-4(5H)-one, 11-beta-Hydroxysteroid Dehydrogenase 1, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Zhang, J.D, Jordan, S.R, Li, V.
Deposit date:2008-10-17
Release date:2008-11-11
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (3 Å)
Cite:Further studies with the 2-amino-1,3-thiazol-4(5H)-one class of 11-hydroxysteroid dehydrogenase type 1 (11-HSD1) inhibitors: Reducing pregnane X receptor (PXR) activity and exploring activity in a monkey pharmacodynamic model
To be Published, 2008
3EZ4
DownloadVisualize
BU of 3ez4 by Molmil
Crystal structure of 3-methyl-2-oxobutanoate hydroxymethyltransferase from Burkholderia pseudomallei
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 3-methyl-2-oxobutanoate hydroxymethyltransferase
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2008-10-22
Release date:2008-11-04
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of 3-methyl-2-oxobutanoate hydroxymethyltransferase from Burkholderia pseudomallei
To be Published
3F8L
DownloadVisualize
BU of 3f8l by Molmil
Crystal Structure of the Effector Domain of PhnF from Mycobacterium smegmatis
Descriptor: GLYCEROL, HTH-type transcriptional repressor phnF, SULFATE ION
Authors:Busby, J.N, Gebhard, S, Cook, G.M, Baker, E.N, Lott, S.J, Money, V.A.
Deposit date:2008-11-12
Release date:2009-11-17
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of PhnF, a GntR-family transcription regulator in Mycobacterium smegmatis
To be Published
2IG6
DownloadVisualize
BU of 2ig6 by Molmil
Crystal structure of a nimc/nima family protein (ca_c2569) from clostridium acetobutylicum at 1.80 A resolution
Descriptor: 1,2-ETHANEDIOL, FLAVIN MONONUCLEOTIDE, NimC/NimA family protein, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2006-09-22
Release date:2006-10-10
Last modified:2023-01-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of NimC/NimA family protein (NP_349178.1) from Clostridium Acetobutylicum at 1.80 A resolution
To be published
3F99
DownloadVisualize
BU of 3f99 by Molmil
W354F Yersinia enterocolitica PTPase apo form
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Tyrosine-protein phosphatase yopH
Authors:Brandao, T.A.S, Robinson, H, Johnson, S.J, Hengge, A.C.
Deposit date:2008-11-13
Release date:2009-01-20
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Impaired acid catalysis by mutation of a protein loop hinge residue in a YopH mutant revealed by crystal structures.
J.Am.Chem.Soc., 131, 2009
3FB1
DownloadVisualize
BU of 3fb1 by Molmil
Crystal Structure of Purine Nucleoside Phosphorylase in Complex with Ribose-1-Phosphate
Descriptor: 1-O-phosphono-alpha-D-ribofuranose, ACETATE ION, Purine-nucleoside phosphorylase
Authors:Pereira, H.M, Garratt, R.C, Oliva, G.
Deposit date:2008-11-18
Release date:2009-11-24
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.002 Å)
Cite:Purine nucleoside phosphorylase from Schistosoma mansoni in complex with ribose-1-phosphate.
J.Synchrotron Radiat., 18, 2011
3FCK
DownloadVisualize
BU of 3fck by Molmil
Complex of UNG2 and a fragment-based design inhibitor
Descriptor: 3-({[3-({[(1E)-(2,6-dioxo-1,2,3,6-tetrahydropyrimidin-4-yl)methylidene]amino}oxy)propyl]amino}methyl)benzoic acid, Uracil-DNA glycosylase
Authors:Bianchet, M.A, Chung, S, Parker, J.B, Amzel, L.M, Stivers, J.T.
Deposit date:2008-11-21
Release date:2009-04-28
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Impact of linker strain and flexibility in the design of a fragment-based inhibitor
Nat.Chem.Biol., 5, 2009
3FEH
DownloadVisualize
BU of 3feh by Molmil
Crystal structure of full length centaurin alpha-1
Descriptor: Centaurin-alpha-1, UNKNOWN ATOM OR ION, ZINC ION
Authors:Shen, L, Tong, Y, Tempel, W, MacKenzie, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Weigelt, J, Bochkarev, A, Park, H, Structural Genomics Consortium (SGC)
Deposit date:2008-11-29
Release date:2008-12-23
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Phosphorylation-independent dual-site binding of the FHA domain of KIF13 mediates phosphoinositide transport via centaurin {alpha}1.
Proc.Natl.Acad.Sci.USA, 107, 2010
3F0Z
DownloadVisualize
BU of 3f0z by Molmil
Crystal structure of Clostridium acetobutylicum 8-oxoguanine glycosylase/lyase in its apo-form
Descriptor: 8-oxoguanine-DNA-glycosylase, GLYCEROL
Authors:Faucher, F, Doublie, S.
Deposit date:2008-10-27
Release date:2009-04-07
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural characterization of Clostridium acetobutylicum 8-oxoguanine DNA glycosylase in its apo form and in complex with 8-oxodeoxyguanosine.
J.Mol.Biol., 387, 2009

224931

PDB entries from 2024-09-11

PDB statisticsPDBj update infoContact PDBjnumon