2N5N
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![BU of 2n5n by Molmil](/molmil-images/mine/2n5n) | Structure of an N-terminal domain of CHD4 | Descriptor: | Chromodomain-helicase-DNA-binding protein 4 | Authors: | Silva, A.P.G, Mackay, J.P. | Deposit date: | 2015-07-22 | Release date: | 2015-11-18 | Last modified: | 2024-05-15 | Method: | SOLUTION NMR | Cite: | The N-terminal Region of Chromodomain Helicase DNA-binding Protein 4 (CHD4) Is Essential for Activity and Contains a High Mobility Group (HMG) Box-like-domain That Can Bind Poly(ADP-ribose). J.Biol.Chem., 291, 2016
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7PC1
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![BU of 7pc1 by Molmil](/molmil-images/mine/7pc1) | |
7CSY
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![BU of 7csy by Molmil](/molmil-images/mine/7csy) | Pseudomonas aeruginosa antitoxin HigA with higBA promoter | Descriptor: | DNA (28-MER), DNA (29-MER), HTH cro/C1-type domain-containing protein, ... | Authors: | Song, Y.J, Luo, G.H, Bao, R. | Deposit date: | 2020-08-17 | Release date: | 2021-01-13 | Last modified: | 2024-05-29 | Method: | X-RAY DIFFRACTION (2.29 Å) | Cite: | Pseudomonas aeruginosa antitoxin HigA functions as a diverse regulatory factor by recognizing specific pseudopalindromic DNA motifs. Environ.Microbiol., 23, 2021
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326D
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![BU of 326d by Molmil](/molmil-images/mine/326d) | CRYSTAL STRUCTURES OF D(CM5CGGGCCM5CGG)-ORTHOGONAL FORM | Descriptor: | DNA (5'-D(*CP*(5CM)P*GP*GP*GP*CP*CP*(5CM)P*GP*G)-3'), SPERMINE | Authors: | Tippin, D.B, Sundaralingam, M. | Deposit date: | 1997-03-17 | Release date: | 1997-05-22 | Last modified: | 2024-02-21 | Method: | X-RAY DIFFRACTION (2.15 Å) | Cite: | Nine polymorphic crystal structures of d(CCGGGCCCGG), d(CCGGGCCm5CGG), d(Cm5CGGGCCm5CGG) and d(CCGGGCC(Br)5CGG) in three different conformations: effects of spermine binding and methylation on the bending and condensation of A-DNA. J.Mol.Biol., 267, 1997
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322D
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![BU of 322d by Molmil](/molmil-images/mine/322d) | CRYSTAL STRUCTURES OF D(CCGGGCCM5CGG)-HEXAGONAL FORM | Descriptor: | DNA (5'-D(*CP*CP*GP*GP*GP*CP*CP*(5CM)P*GP*G)-3') | Authors: | Tippin, D.B, Sundaralingam, M. | Deposit date: | 1997-03-17 | Release date: | 1997-05-22 | Last modified: | 2024-02-21 | Method: | X-RAY DIFFRACTION (2.5 Å) | Cite: | Nine polymorphic crystal structures of d(CCGGGCCCGG), d(CCGGGCCm5CGG), d(Cm5CGGGCCm5CGG) and d(CCGGGCC(Br)5CGG) in three different conformations: effects of spermine binding and methylation on the bending and condensation of A-DNA. J.Mol.Biol., 267, 1997
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399D
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![BU of 399d by Molmil](/molmil-images/mine/399d) | STRUCTURE OF D(CGCCCGCGGGCG) | Descriptor: | DNA (5'-D(*CP*GP*CP*CP*CP*GP*CP*GP*GP*GP*CP*G)-3') | Authors: | Malinina, L, Fernandez, L.G, Subirana, J.A. | Deposit date: | 1998-05-11 | Release date: | 1999-01-18 | Last modified: | 2024-02-21 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Structure of the d(CGCCCGCGGGCG) dodecamer: a kinked A-DNA molecule showing some B-DNA features. J.Mol.Biol., 285, 1999
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321D
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![BU of 321d by Molmil](/molmil-images/mine/321d) | CRYSTAL STRUCTURES OF D(CCGGGCCCGG)-ORTHOGONAL FORM | Descriptor: | DNA (5'-D(*CP*CP*GP*GP*GP*CP*CP*CP*GP*G)-3'), SPERMINE | Authors: | Tippin, D.B, Sundaralingam, M. | Deposit date: | 1997-03-17 | Release date: | 1997-05-22 | Last modified: | 2024-02-21 | Method: | X-RAY DIFFRACTION (2.15 Å) | Cite: | Nine polymorphic crystal structures of d(CCGGGCCCGG), d(CCGGGCCm5CGG), d(Cm5CGGGCCm5CGG) and d(CCGGGCC(Br)5CGG) in three different conformations: effects of spermine binding and methylation on the bending and condensation of A-DNA. J.Mol.Biol., 267, 1997
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318D
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![BU of 318d by Molmil](/molmil-images/mine/318d) | CRYSTAL STRUCTURES OF D(CCGGGCC(BR)5CGG)-HEXAGONAL FORM | Descriptor: | DNA (5'-D(*CP*CP*GP*GP*GP*CP*CP*(CBR)P*GP*G)-3') | Authors: | Tippin, D.B, Sundaralingam, M. | Deposit date: | 1997-03-17 | Release date: | 1997-05-22 | Last modified: | 2024-02-21 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | Nine polymorphic crystal structures of d(CCGGGCCCGG), d(CCGGGCCm5CGG), d(Cm5CGGGCCm5CGG) and d(CCGGGCC(Br)5CGG) in three different conformations: effects of spermine binding and methylation on the bending and condensation of A-DNA. J.Mol.Biol., 267, 1997
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3W3C
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![BU of 3w3c by Molmil](/molmil-images/mine/3w3c) | Crystal structure of VirB core domain complexed with the cis-acting site upstream icsb promoter | Descriptor: | DNA (26-MER), Virulence regulon transcriptional activator VirB | Authors: | Gao, X.P, Waltersperger, S, Wang, M.T, Cui, S. | Deposit date: | 2012-12-19 | Release date: | 2013-09-04 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (2.431 Å) | Cite: | Structural insights into VirB-DNA complexes reveal mechanism of transcriptional activation of virulence genes Nucleic Acids Res., 41, 2013
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324D
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![BU of 324d by Molmil](/molmil-images/mine/324d) | CRYSTAL STRUCTURES OF D(CCGGGCCM5CGG)-ORTHOGONAL FORM | Descriptor: | DNA (5'-D(*CP*CP*GP*GP*GP*CP*CP*(5CM)P*GP*G)-3'), SPERMINE | Authors: | Tippin, D.B, Sundaralingam, M. | Deposit date: | 1997-03-17 | Release date: | 1997-05-22 | Last modified: | 2024-02-21 | Method: | X-RAY DIFFRACTION (2.15 Å) | Cite: | Nine polymorphic crystal structures of d(CCGGGCCCGG), d(CCGGGCCm5CGG), d(Cm5CGGGCCm5CGG) and d(CCGGGCC(Br)5CGG) in three different conformations: effects of spermine binding and methylation on the bending and condensation of A-DNA. J.Mol.Biol., 267, 1997
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325D
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![BU of 325d by Molmil](/molmil-images/mine/325d) | CRYSTAL STRUCTURES OF D(CM5CGGGCCM5CGG)-HEXAGONAL FORM | Descriptor: | DNA (5'-D(*CP*(5CM)P*GP*GP*GP*CP*CP*(5CM)P*GP*G)-3') | Authors: | Tippin, D.B, Sundaralingam, M. | Deposit date: | 1997-03-17 | Release date: | 1997-05-22 | Last modified: | 2024-02-21 | Method: | X-RAY DIFFRACTION (2.5 Å) | Cite: | Nine polymorphic crystal structures of d(CCGGGCCCGG), d(CCGGGCCm5CGG), d(Cm5CGGGCCm5CGG) and d(CCGGGCC(Br)5CGG) in three different conformations: effects of spermine binding and methylation on the bending and condensation of A-DNA. J.Mol.Biol., 267, 1997
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320D
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![BU of 320d by Molmil](/molmil-images/mine/320d) | CRYSTAL STRUCTURES OF D(CCGGGCCCGG)-ORTHOGONAL FORM | Descriptor: | DNA (5'-D(*CP*CP*GP*GP*GP*CP*CP*CP*GP*G)-3'), SPERMINE | Authors: | Tippin, D.B, Sundaralingam, M. | Deposit date: | 1997-03-17 | Release date: | 1997-05-22 | Last modified: | 2024-02-21 | Method: | X-RAY DIFFRACTION (2.15 Å) | Cite: | Nine polymorphic crystal structures of d(CCGGGCCCGG), d(CCGGGCCm5CGG), d(Cm5CGGGCCm5CGG) and d(CCGGGCC(Br)5CGG) in three different conformations: effects of spermine binding and methylation on the bending and condensation of A-DNA. J.Mol.Biol., 267, 1997
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319D
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![BU of 319d by Molmil](/molmil-images/mine/319d) | CRYSTAL STRUCTURES OF D(CCGGG(BR)5CCCGG)-ORTHOGONAL FORM | Descriptor: | DNA (5'-D(*CP*CP*GP*GP*GP*(CBR)P*CP*CP*GP*G)-3'), THERMINE | Authors: | Tippin, D.B, Sundaralingam, M. | Deposit date: | 1997-03-17 | Release date: | 1997-05-22 | Last modified: | 2024-02-21 | Method: | X-RAY DIFFRACTION (2.2 Å) | Cite: | Nine polymorphic crystal structures of d(CCGGGCCCGG), d(CCGGGCCm5CGG), d(Cm5CGGGCCm5CGG) and d(CCGGGCC(Br)5CGG) in three different conformations: effects of spermine binding and methylation on the bending and condensation of A-DNA. J.Mol.Biol., 267, 1997
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323D
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![BU of 323d by Molmil](/molmil-images/mine/323d) | CRYSTAL STRUCTURES OF D(CCGGGCCM5CGG)-ORTHOGONAL FORM | Descriptor: | DNA (5'-D(*CP*CP*GP*GP*GP*CP*CP*(5CM)P*GP*G)-3'), SPERMINE | Authors: | Tippin, D.B, Sundaralingam, M. | Deposit date: | 1997-03-17 | Release date: | 1997-05-22 | Last modified: | 2024-02-21 | Method: | X-RAY DIFFRACTION (2.15 Å) | Cite: | Nine polymorphic crystal structures of d(CCGGGCCCGG), d(CCGGGCCm5CGG), d(Cm5CGGGCCm5CGG) and d(CCGGGCC(Br)5CGG) in three different conformations: effects of spermine binding and methylation on the bending and condensation of A-DNA. J.Mol.Biol., 267, 1997
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3F23
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![BU of 3f23 by Molmil](/molmil-images/mine/3f23) | Crystal structure of Zalpha in complex with d(CGGCCG) | Descriptor: | DNA (5'-D(*DTP*DCP*DGP*DGP*DCP*DCP*DG)-3'), Double-stranded RNA-specific adenosine deaminase | Authors: | Ha, S.C, Choi, J, Kim, K.K. | Deposit date: | 2008-10-28 | Release date: | 2008-12-30 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (2.7 Å) | Cite: | The structures of non-CG-repeat Z-DNAs co-crystallized with the Z-DNA-binding domain, hZ{alpha}ADAR1 Nucleic Acids Res., 37, 2009
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3F22
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![BU of 3f22 by Molmil](/molmil-images/mine/3f22) | Crystal structure of Zalpha in complex with d(CGTACG) | Descriptor: | DNA (5'-D(*DTP*DCP*DGP*DTP*DAP*DCP*DG)-3'), Double-stranded RNA-specific adenosine deaminase | Authors: | Ha, S.C, Choi, J, Kim, K.K. | Deposit date: | 2008-10-28 | Release date: | 2008-12-30 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (2.5 Å) | Cite: | The structures of non-CG-repeat Z-DNAs co-crystallized with the Z-DNA-binding domain, hZ{alpha}ADAR1 Nucleic Acids Res., 37, 2009
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8WHB
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![BU of 8whb by Molmil](/molmil-images/mine/8whb) | Structure of nucleosome core particle of Arabidopsis thaliana | Descriptor: | DNA (antisense strand), DNA (sense strand), Histone H2A.6, ... | Authors: | Liu, Y, Zhang, Z, Du, J. | Deposit date: | 2023-09-23 | Release date: | 2024-04-17 | Method: | ELECTRON MICROSCOPY (3.17 Å) | Cite: | Molecular basis of chromatin remodelling by DDM1 involved in plant DNA methylation. Nat.Plants, 10, 2024
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8J71
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![BU of 8j71 by Molmil](/molmil-images/mine/8j71) | |
4ESV
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![BU of 4esv by Molmil](/molmil-images/mine/4esv) | A New Twist on the Translocation Mechanism of Helicases from the Structure of DnaB with its Substrates | Descriptor: | 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 5'-D(P*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3', 5'-D(P*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3', ... | Authors: | Itsathitphaisarn, O, Wing, R.A, Eliason, W.K, Wang, J, Steitz, T.A. | Deposit date: | 2012-04-23 | Release date: | 2012-10-24 | Last modified: | 2024-02-28 | Method: | X-RAY DIFFRACTION (3.2 Å) | Cite: | The Hexameric Helicase DnaB Adopts a Nonplanar Conformation during Translocation. Cell(Cambridge,Mass.), 151, 2012
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3B0Y
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![BU of 3b0y by Molmil](/molmil-images/mine/3b0y) | K263D mutant of PolX from Thermus thermophilus HB8 complexed with Ca-dGTP | Descriptor: | 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, CALCIUM ION, CHLORIDE ION, ... | Authors: | Nakane, S, Nakagawa, N, Masui, R, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2011-06-17 | Release date: | 2012-05-02 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (1.45 Å) | Cite: | The structural basis of the kinetic mechanism of a gap-filling X-family DNA polymerase that binds Mg(2+)-dNTP before binding to DNA. J.Mol.Biol., 417, 2012
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4JCV
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![BU of 4jcv by Molmil](/molmil-images/mine/4jcv) | |
2BBY
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![BU of 2bby by Molmil](/molmil-images/mine/2bby) | DNA-BINDING DOMAIN FROM HUMAN RAP30, NMR, 30 STRUCTURES | Descriptor: | RAP30 | Authors: | Groft, C.M, Uljon, S.N, Wang, R, Werner, M.H. | Deposit date: | 1998-04-27 | Release date: | 1998-11-25 | Last modified: | 2024-05-22 | Method: | SOLUTION NMR | Cite: | Structural homology between the Rap30 DNA-binding domain and linker histone H5: implications for preinitiation complex assembly. Proc.Natl.Acad.Sci.USA, 95, 1998
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3B0X
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![BU of 3b0x by Molmil](/molmil-images/mine/3b0x) | K263A mutant of PolX from Thermus thermophilus HB8 complexed with Ca-dGTP | Descriptor: | 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, CALCIUM ION, CHLORIDE ION, ... | Authors: | Nakane, S, Nakagawa, N, Masui, R, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | Deposit date: | 2011-06-17 | Release date: | 2012-05-02 | Last modified: | 2023-11-01 | Method: | X-RAY DIFFRACTION (1.36 Å) | Cite: | The structural basis of the kinetic mechanism of a gap-filling X-family DNA polymerase that binds Mg(2+)-dNTP before binding to DNA. J.Mol.Biol., 417, 2012
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3F21
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![BU of 3f21 by Molmil](/molmil-images/mine/3f21) | Crystal structure of Zalpha in complex with d(CACGTG) | Descriptor: | DNA (5'-D(*DTP*DCP*DAP*DCP*DGP*DTP*DG)-3'), Double-stranded RNA-specific adenosine deaminase | Authors: | Ha, S.C, Choi, J, Kim, K.K. | Deposit date: | 2008-10-28 | Release date: | 2008-12-30 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (2.2 Å) | Cite: | The structures of non-CG-repeat Z-DNAs co-crystallized with the Z-DNA-binding domain, hZ{alpha}ADAR1 Nucleic Acids Res., 37, 2009
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1EXJ
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![BU of 1exj by Molmil](/molmil-images/mine/1exj) | CRYSTAL STRUCTURE OF TRANSCRIPTION ACTIVATOR BMRR, FROM B. SUBTILIS, BOUND TO 21 BASE PAIR BMR OPERATOR AND TPP | Descriptor: | DNA (5'-D(*AP*CP*CP*CP*TP*CP*CP*CP*CP*TP*TP*AP*GP*GP*GP*GP*AP*GP*GP*GP*T)-3'), MULTIDRUG-EFFLUX TRANSPORTER REGULATOR, SODIUM ION, ... | Authors: | Zheleznova-Heldwein, E.E, Brennan, R.G. | Deposit date: | 2000-05-02 | Release date: | 2001-01-24 | Last modified: | 2024-02-07 | Method: | X-RAY DIFFRACTION (3 Å) | Cite: | Crystal structure of the transcription activator BmrR bound to DNA and a drug. Nature, 409, 2001
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