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1TF7
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BU of 1tf7 by Molmil
Crystal Structure of Circadian Clock Protein KaiC
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, KaiC
Authors:Pattanayek, R, Wang, J, Mori, T, Xu, Y, Johnson, C.H, Egli, M.
Deposit date:2004-05-26
Release date:2004-08-24
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Visualizing a Circadian Clock Protein; Crystal Structure of KaiC and Functional Insights
Mol.Cell, 15, 2004
5JWO
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BU of 5jwo by Molmil
Crystal structure of foldswitch-stabilized KaiB in complex with the N-terminal CI domain of KaiC from Thermosynechococcus elongatus
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Circadian clock protein KaiB, Circadian clock protein kinase KaiC
Authors:Tseng, R, Goularte, N.F, Chavan, A, Luu, J, Chang, Y, Heilser, J, Tripathi, S, LiWang, A, Partch, C.L.
Deposit date:2016-05-12
Release date:2017-03-29
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis of the day-night transition in a bacterial circadian clock.
Science, 355, 2017
1WWJ
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BU of 1wwj by Molmil
crystal structure of KaiB from Synechocystis sp.
Descriptor: Circadian clock protein kaiB, D-MALATE, IMIDAZOLE, ...
Authors:Hitomi, K, Oyama, T, Han, S, Arvai, A.S, Tainer, J.A, Getzoff, E.D.
Deposit date:2005-01-06
Release date:2005-02-15
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Tetrameric architecture of the circadian clock protein KaiB. A novel interface for intermolecular interactions and its impact on the circadian rhythm.
J.Biol.Chem., 280, 2005
5JWQ
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BU of 5jwq by Molmil
Crystal structure of KaiC S431E in complex with foldswitch-stabilized KaiB from Thermosynechococcus elongatus
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Circadian clock protein KaiB, Circadian clock protein kinase KaiC
Authors:Tseng, R, Goularte, N.F, Chavan, A, Luu, J, Chang, Y, Heilser, J, Tripathi, S, LiWang, A, Partch, C.L.
Deposit date:2016-05-12
Release date:2017-03-29
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (3.871 Å)
Cite:Structural basis of the day-night transition in a bacterial circadian clock.
Science, 355, 2017
1VGL
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BU of 1vgl by Molmil
Crystal structure of tetrameric KaiB from T.elongatus BP-1
Descriptor: Circadian clock protein kaiB, MERCURY (II) ION
Authors:Iwase, R, Imada, K, Hayashi, F, Uzumaki, T, Namba, K, Ishiura, M.
Deposit date:2004-04-27
Release date:2005-08-16
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Functionally important substructures of circadian clock protein KaiB in a unique tetramer complex.
J.Biol.Chem., 280, 2005
1Q6A
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BU of 1q6a by Molmil
Solution Structure of the C-terminal Domain of Thermosynechococcus elongatus KaiA (ThKaiA180C); Averaged Minimized Structure
Descriptor: Circadian clock protein KaiA homolog
Authors:Vakonakis, I, Sun, J, Holzenburg, A, Golden, S.S, LiWang, A.C.
Deposit date:2003-08-13
Release date:2003-08-19
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:NMR structure of the KaiC-interacting C-terminal domain of KaiA, a circadian clock protein: Implications for KaiA-KaiC interaction
Proc.Natl.Acad.Sci.USA, 101, 2004
1Q6B
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BU of 1q6b by Molmil
Solution Structure of the C-terminal Domain of Thermosynechococcus elongatus KaiA (ThKaiA180C); Ensemble of 25 Structures
Descriptor: Circadian clock protein KaiA homolog
Authors:Vakonakis, I, Sun, J, Golden, S.S, Holzenburg, A, LiWang, A.C.
Deposit date:2003-08-13
Release date:2003-08-19
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:NMR structure of the KaiC-interacting C-terminal domain of KaiA, a circadian clock protein: implications for KaiA-KaiC interaction
Proc.Natl.Acad.Sci.USA, 101, 2004
2E1N
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BU of 2e1n by Molmil
Crystal structure of the Cyanobacterium circadian clock modifier Pex
Descriptor: Pex, SULFATE ION
Authors:Arita, K, Shimizu, T.
Deposit date:2006-10-26
Release date:2006-11-28
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural and Biochemical Characterization of a Cyanobacterium Circadian Clock-modifier Protein
J.Biol.Chem., 282, 2007
4TLC
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BU of 4tlc by Molmil
Crystal structure of N-terminal C1 domain of KaiC
Descriptor: CHLORIDE ION, Circadian clock protein kinase KaiC, MAGNESIUM ION, ...
Authors:Abe, J, Hiyama, T.B, Mukaiyama, A, Son, S, Akiyama, S.
Deposit date:2014-05-29
Release date:2015-07-01
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Atomic-scale origins of slowness in the cyanobacterial circadian clock
Science, 349, 2015
4TL8
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BU of 4tl8 by Molmil
Crystal structure of N-terminal C1 domain of KaiC
Descriptor: CHLORIDE ION, Circadian clock protein kinase KaiC, MAGNESIUM ION, ...
Authors:Abe, J, Hiyama, T.B, Mukaiyama, A, Son, S, Akiyama, S.
Deposit date:2014-05-29
Release date:2015-07-01
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.859 Å)
Cite:Atomic-scale origins of slowness in the cyanobacterial circadian clock
Science, 349, 2015
4TLD
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BU of 4tld by Molmil
Crystal structure of N-terminal C1 domain of KaiC
Descriptor: CHLORIDE ION, Circadian clock protein kinase KaiC, MAGNESIUM ION, ...
Authors:Abe, J, Hiyama, T.B, Mukaiyama, A, Son, S, Akiyama, S.
Deposit date:2014-05-29
Release date:2015-07-01
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.949 Å)
Cite:Atomic-scale origins of slowness in the cyanobacterial circadian clock
Science, 349, 2015
4IJM
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BU of 4ijm by Molmil
Crystal structure of circadian clock protein KaiC A422V mutant
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Circadian clock protein kinase KaiC, MAGNESIUM ION, ...
Authors:Egli, M, Pattanayek, R.
Deposit date:2012-12-21
Release date:2013-02-13
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.352 Å)
Cite:Loop-Loop Interactions Regulate KaiA-Stimulated KaiC Phosphorylation in the Cyanobacterial KaiABC Circadian Clock.
Biochemistry, 52, 2013
5C5E
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BU of 5c5e by Molmil
Structure of KaiA dimer in complex with C-terminal KaiC peptide at 2.8 A resolution
Descriptor: 2-(6-hydroxy-3-oxo-3H-xanthen-9-yl)-5-[(sulfanylcarbonyl)amino]benzoic acid, Circadian clock protein KaiA, KaiC C-terminal peptide
Authors:Pattanayek, R, Egli, M.
Deposit date:2015-06-19
Release date:2015-08-05
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.82 Å)
Cite:Protein-Protein Interactions in the Cyanobacterial Circadian Clock: Structure of KaiA Dimer in Complex with C-Terminal KaiC Peptides at 2.8 angstrom Resolution.
Biochemistry, 54, 2015
3S1A
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BU of 3s1a by Molmil
Crystal structure of the phosphorylation-site double mutant S431E/T432E of the KaiC circadian clock protein
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Circadian clock protein kinase kaiC, MAGNESIUM ION
Authors:Pattanayek, R, Williams, D.W, Rossi, G, Weigand, S, Mori, T, Johnson, C.H, Stewart, P.L, Egli, M.
Deposit date:2011-05-14
Release date:2011-09-21
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Combined SAXS/EM Based Models of the S. elongatus Post-Translational Circadian Oscillator and its Interactions with the Output His-Kinase SasA.
Plos One, 6, 2011
1U9I
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BU of 1u9i by Molmil
Crystal Structure of Circadian Clock Protein KaiC with Phosphorylation Sites
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, KaiC, MAGNESIUM ION
Authors:Xu, Y, Mori, T, Pattanayek, R, Pattanayek, S, Egli, M, Johnson, C.H.
Deposit date:2004-08-09
Release date:2005-04-19
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Identification of key phosphorylation sites in the circadian clock protein KaiC by crystallographic and mutagenetic analyses
PROC.NATL.ACAD.SCI.USA, 101, 2004
4XGT
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BU of 4xgt by Molmil
Structure of RNA Helicase FRH a Critical Component of the Neurospora Crassa Circadian Clock
Descriptor: FRQ-interacting RNA helicase
Authors:Conrad, K.S, Crane, B.C.
Deposit date:2015-01-02
Release date:2016-07-06
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.09 Å)
Cite:Structure of the frequency-interacting RNA helicase: a protein interaction hub for the circadian clock.
Embo J., 35, 2016
5E02
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BU of 5e02 by Molmil
Structure of RNA Helicase FRH a Critical Component of the Neurospora Crassa Circadian Clock
Descriptor: ADENOSINE-5'-DIPHOSPHATE, FRQ-interacting RNA helicase, RNA (5'-R(*AP*AP*AP*A)-3')
Authors:Conrad, K.S, Crane, B.C.
Deposit date:2015-09-28
Release date:2016-07-06
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:Structure of the frequency-interacting RNA helicase: a protein interaction hub for the circadian clock.
Embo J., 35, 2016
5DZR
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BU of 5dzr by Molmil
Structure of RNA Helicase FRH a Critical Component of the Neurospora Crassa Circadian Clock
Descriptor: FRQ-interacting RNA helicase
Authors:Conrad, K.S, Crane, B.C.
Deposit date:2015-09-26
Release date:2016-07-06
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.161 Å)
Cite:Structure of the frequency-interacting RNA helicase: a protein interaction hub for the circadian clock.
Embo J., 35, 2016
1R8J
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BU of 1r8j by Molmil
Crystal Structure of Circadian Clock Protein KaiA from Synechococcus elongatus
Descriptor: KaiA
Authors:Ye, S, Vakonakis, I, Sacchettini, J.C, LiWang, A.C.
Deposit date:2003-10-26
Release date:2004-06-01
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Crystal structure of circadian clock protein KaiA from Synechococcus elongatus
J.Biol.Chem., 279, 2004
6QPJ
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BU of 6qpj by Molmil
Human CLOCK PAS-A domain
Descriptor: Circadian locomoter output cycles protein kaput
Authors:Kwon, H, Freeman, S.L, Moody, P.C.E, Raven, E.L, Basran, J.
Deposit date:2019-02-14
Release date:2019-09-25
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.315 Å)
Cite:Heme binding to human CLOCK affects interactions with the E-box.
Proc.Natl.Acad.Sci.USA, 116, 2019
3DVL
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BU of 3dvl by Molmil
Crystal Structure of Full Length Circadian Clock Protein KaiC with Correct Geometry at Phosphorylation Sites
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Circadian clock protein kinase kaiC, MAGNESIUM ION
Authors:Pattanayek, R, Egli, M.
Deposit date:2008-07-18
Release date:2009-07-28
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal Structure of Full Length Circadian Clock Protein KaiC with Correct Geometry at Phosphorylation Sites
To be Published
4DUG
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BU of 4dug by Molmil
Crystal Structure of Circadian Clock Protein KaiC E318A Mutant
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Circadian clock protein kinase kaiC, MAGNESIUM ION, ...
Authors:Egli, M, Mori, T, Pattanayek, R, Xu, Y, Qin, X, Johnson, C.H.
Deposit date:2012-02-21
Release date:2012-03-14
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.292 Å)
Cite:Dephosphorylation of the Core Clock Protein KaiC in the Cyanobacterial KaiABC Circadian Oscillator Proceeds via an ATP Synthase Mechanism.
Biochemistry, 51, 2012
7X1Z
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BU of 7x1z by Molmil
Structure of the phosphorylation-site double mutant S431E/T432E of the KaiC circadian clock protein
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Circadian clock oscillator protein KaiC, MAGNESIUM ION
Authors:Han, X, Zhang, D.L, Hong, L, Yu, D.Q, Wu, Z.L, Yang, T, Rust, M.J, Tu, Y.H, Ouyang, Q.
Deposit date:2022-02-25
Release date:2023-04-19
Last modified:2023-11-08
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Determining subunit-subunit interaction from statistics of cryo-EM images: observation of nearest-neighbor coupling in a circadian clock protein complex
Nat Commun, 14, 2023
7X1Y
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BU of 7x1y by Molmil
Structure of the phosphorylation-site double mutant S431A/T432A of the KaiC circadian clock protein
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Circadian clock oscillator protein KaiC, MAGNESIUM ION
Authors:Han, X, Zhang, D.L, Hong, L, Yu, D.Q, Wu, Z.L, Yang, T, Rust, M.J, Tu, Y.H, Ouyang, Q.
Deposit date:2022-02-25
Release date:2023-04-26
Last modified:2023-11-08
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Determining subunit-subunit interaction from statistics of cryo-EM images: observation of nearest-neighbor coupling in a circadian clock protein complex
Nat Commun, 14, 2023
5N8Y
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BU of 5n8y by Molmil
KaiCBA circadian clock backbone model based on a Cryo-EM density
Descriptor: Circadian clock protein KaiA, Circadian clock protein KaiB, Circadian clock protein kinase KaiC
Authors:Schuller, J.M, Snijder, J, Loessl, P, Heck, A.J.R, Foerster, F.
Deposit date:2017-02-24
Release date:2017-03-29
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (4.7 Å)
Cite:Structures of the cyanobacterial circadian oscillator frozen in a fully assembled state.
Science, 355, 2017

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