Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

7PVI
DownloadVisualize
BU of 7pvi by Molmil
dTDP-sugar epimerase
Descriptor: CITRATE ANION, SODIUM ION, alpha-D-xylopyranose, ...
Authors:Cross, A.R, Harmer, N.J, Isupov, M.N.
Deposit date:2021-10-04
Release date:2022-04-20
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.434 Å)
Cite:Spinning sugars in antigen biosynthesis: characterization of the Coxiella burnetii and Streptomyces griseus TDP-sugar epimerases.
J.Biol.Chem., 298, 2022
7PWB
DownloadVisualize
BU of 7pwb by Molmil
dTDP-sugar epimerase from Coxiella burnetii in complex with dTDP
Descriptor: 1,2-ETHANEDIOL, CITRIC ACID, THYMIDINE-5'-DIPHOSPHATE, ...
Authors:Cross, A.R, Harmer, N.J, Isupov, M.N.
Deposit date:2021-10-06
Release date:2022-04-20
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Spinning sugars in antigen biosynthesis: characterization of the Coxiella burnetii and Streptomyces griseus TDP-sugar epimerases.
J.Biol.Chem., 298, 2022
7PWI
DownloadVisualize
BU of 7pwi by Molmil
Structure of the dTDP-sugar epimerase StrM
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, dTDP-4-keto-rhamnose 3,5-epimerase,dTDP-4-dehydrorhamnose 3,5-epimerase
Authors:Cross, A.R, Harmer, N.J, Isupov, M.N.
Deposit date:2021-10-06
Release date:2022-04-20
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.326 Å)
Cite:Spinning sugars in antigen biosynthesis: characterization of the Coxiella burnetii and Streptomyces griseus TDP-sugar epimerases.
J.Biol.Chem., 298, 2022
7PWH
DownloadVisualize
BU of 7pwh by Molmil
Structure of the dTDP-sugar epimerase StrM
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, THYMIDINE-5'-DIPHOSPHATE, ...
Authors:Cross, A.R, Harmer, N.J, Isupov, M.N.
Deposit date:2021-10-06
Release date:2022-04-20
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Spinning sugars in antigen biosynthesis: characterization of the Coxiella burnetii and Streptomyces griseus TDP-sugar epimerases.
J.Biol.Chem., 298, 2022
7AN4
DownloadVisualize
BU of 7an4 by Molmil
MlghB, GDP-mannoheptose C3,5 epimerase from Campylobacter jejuni complex with GDP-mannose
Descriptor: GUANOSINE-5'-DIPHOSPHATE, Thymidine diphospho-4-keto-rhamnose 3,5-epimerase
Authors:Naismith, J.H, Woodward, L.
Deposit date:2020-10-10
Release date:2020-10-21
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:MghlB with GDP
To Be Published
7ANJ
DownloadVisualize
BU of 7anj by Molmil
DdahB, GDP-mannoheptose C3,5 epimerase from Campylobacter jejuni complexed to GDP-mannose
Descriptor: GUANOSINE-5'-DIPHOSPHATE, GUANOSINE-5'-DIPHOSPHATE-ALPHA-D-MANNOSE, Thymidine diphospho-4-keto-rhamnose 3,5-epimerase
Authors:Naismith, J.H, Woodward, L.
Deposit date:2020-10-11
Release date:2020-10-21
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:DdhaB with GDP-mannose
To Be Published
7ANI
DownloadVisualize
BU of 7ani by Molmil
DdahB, GDP-mannoheptose C3,5 epimerase from Campylobacter jejuni
Descriptor: GLYCEROL, Thymidine diphospho-4-keto-rhamnose 3,5-epimerase
Authors:Naismith, J.H, Woodward, L.
Deposit date:2020-10-11
Release date:2020-10-21
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:DdahB
To Be Published
7ANG
DownloadVisualize
BU of 7ang by Molmil
MlghB, GDP-mannoheptose C3,5 epimerase from Campylobacter jejuni
Descriptor: Thymidine diphospho-4-keto-rhamnose 3,5-epimerase
Authors:Naismith, J.H, Woodward, L.
Deposit date:2020-10-11
Release date:2020-10-21
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:MghlB
To Be Published
1DZR
DownloadVisualize
BU of 1dzr by Molmil
RmlC from Salmonella typhimurium
Descriptor: DTDP-4-DEHYDRORHAMNOSE 3,5-EPIMERASE, GLYCEROL, SULFATE ION
Authors:Naismith, J.H, Giraud, M.F.
Deposit date:2000-03-07
Release date:2000-04-18
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Rmlc, the Third Enzyme of Dtdp-L-Rhamnose Pathway, is a New Class of Epimerase.
Nat.Struct.Biol., 7, 2000
8DAK
DownloadVisualize
BU of 8dak by Molmil
Crystal structure of the GDP-D-glycero-4-keto-d-lyxo-heptose-3-epimerase from Campylobacter jejuni, serotype HS:3
Descriptor: CHLORIDE ION, GDP-D-glycero-4-keto-d-lyxo-heptose-3-epimerase, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Thoden, J.B, Ghosh, M.K, Xiang, D.F, Raushel, F.M, Holden, H.M.
Deposit date:2022-06-13
Release date:2022-06-22
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:C3- and C3/C5-Epimerases Required for the Biosynthesis of the Capsular Polysaccharides from Campylobacter jejuni .
Biochemistry, 61, 2022
8DB5
DownloadVisualize
BU of 8db5 by Molmil
Crystal structure of the GDP-D-glycero-4-keto-d-lyxo-heptose-3,5-epimerase from Campylobacter jejuni, serotype HS:15
Descriptor: CHLORIDE ION, GDP-D-glycero-4-keto-d-lyxo-heptose-3,5-epimerase, GUANOSINE-5'-DIPHOSPHATE
Authors:Thoden, J.B, Ghosh, M.K, Xiang, D.F, Raushel, F.M, Holden, H.M.
Deposit date:2022-06-14
Release date:2022-06-22
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:C3- and C3/C5-Epimerases Required for the Biosynthesis of the Capsular Polysaccharides from Campylobacter jejuni .
Biochemistry, 61, 2022
8DCO
DownloadVisualize
BU of 8dco by Molmil
Crystal structure of the GDP-D-glycero-4-keto-D-lyxo-heptose-3,5-epimerase from Campylobacter jejuni, serotype HS:42
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, GDP-D-glycero-4-keto-D-lyxo-heptose-3,5-epimerase, ...
Authors:Thoden, J.B, Xiang, D.F, Ghosh, M.K, Raushel, F.M, Holden, H.M.
Deposit date:2022-06-17
Release date:2022-06-29
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:C3- and C3/C5-Epimerases Required for the Biosynthesis of the Capsular Polysaccharides from Campylobacter jejuni .
Biochemistry, 61, 2022
8DCL
DownloadVisualize
BU of 8dcl by Molmil
Crystal structure of the GDP-D-glycero-4-keto-D-lyxo-heptose-3-epimerase from campylobacter jejuni, serotype HS:23/36
Descriptor: 1,2-ETHANEDIOL, GDP-D-glycero-4-keto-D-lyxo-heptose-3-epimerase, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Thoden, J.B, Ghosh, M.K, Xiang, D.F, Raushel, F.M, Holden, H.M.
Deposit date:2022-06-16
Release date:2022-06-29
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:C3- and C3/C5-Epimerases Required for the Biosynthesis of the Capsular Polysaccharides from Campylobacter jejuni .
Biochemistry, 61, 2022
1EP0
DownloadVisualize
BU of 1ep0 by Molmil
HIGH RESOLUTION CRYSTAL STRUCTURE OF DTDP-6-DEOXY-D-XYLO-4-HEXULOSE 3,5-EPIMERASE FROM METHANOBACTERIUM THERMOAUTOTROPHICUM
Descriptor: DTDP-6-DEOXY-D-XYLO-4-HEXULOSE 3,5-EPIMERASE
Authors:Christendat, D, Saridakis, V, Bochkarev, A, Pai, E.F, Arrowsmith, C.H, Edwards, A.M, Northeast Structural Genomics Consortium (NESG)
Deposit date:2000-03-24
Release date:2000-12-13
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of dTDP-4-keto-6-deoxy-D-hexulose 3,5-epimerase from Methanobacterium thermoautotrophicum complexed with dTDP.
J.Biol.Chem., 275, 2000
1EPZ
DownloadVisualize
BU of 1epz by Molmil
CRYSTAL STRUCTURE OF DTDP-6-DEOXY-D-XYLO-4-HEXULOASE 3,5-EPIMERASE FROM METHANOBACTERIUM THERMOAUTOTROPHICUM WITH BOUND LIGAND.
Descriptor: DTDP-6-DEOXY-D-XYLO-4-HEXULOSE 3,5-EPIMERASE, THYMIDINE-5'-DIPHOSPHATE
Authors:Christendat, D, Saridakis, V, Bochkarev, A, Pai, E.F, Arrowsmith, C, Edwards, A.M.
Deposit date:2000-03-30
Release date:2000-12-13
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structure of dTDP-4-keto-6-deoxy-D-hexulose 3,5-epimerase from Methanobacterium thermoautotrophicum complexed with dTDP.
J.Biol.Chem., 275, 2000
1NYW
DownloadVisualize
BU of 1nyw by Molmil
The high resolution structures of RmlC from Streptoccus suis in complex with dTDP-D-glucose
Descriptor: 2'DEOXY-THYMIDINE-5'-DIPHOSPHO-ALPHA-D-GLUCOSE, dTDP-6-deoxy-D-xylo-4-hexulose 3,5-epimerase
Authors:Dong, C, Major, L.L, Allen, A, Blankenfeldt, W, Maskell, D, Naismith, J.H.
Deposit date:2003-02-14
Release date:2003-06-24
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:High-Resolution Structures of RmlC from Streptococcus suis in Complex with Substrate Analogs Locate the Active Site of This Class of Enzyme
Structure, 11, 2003
1NZC
DownloadVisualize
BU of 1nzc by Molmil
The high resolution structures of RmlC from Streptococcus suis in complex with dTDP-D-xylose
Descriptor: NICKEL (II) ION, THYMIDINE-5'-DIPHOSPHO-BETA-D-XYLOSE, dTDP-6-deoxy-D-xylo-4-hexulose 3,5-epimerase
Authors:Dong, C, Major, L.L, Allen, A, Blankenfeldt, W, Maskell, D, Naismith, J.H.
Deposit date:2003-02-17
Release date:2003-06-24
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:High-Resolution Structures of RmlC from Streptococcus suis in Complex with Substrate Analogs Locate the Active Site of This Class of Enzyme
Structure, 11, 2003
1NXM
DownloadVisualize
BU of 1nxm by Molmil
The high resolution structures of RmlC from Streptococcus suis
Descriptor: dTDP-6-deoxy-D-xylo-4-hexulose 3,5-epimerase
Authors:Dong, C, Major, L.L, Allen, A, Blankenfeldt, W, Maskell, D, Naismith, J.H.
Deposit date:2003-02-11
Release date:2003-06-24
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:High-Resolution Structures of RmlC from Streptococcus suis in Complex with Substrate Analogs Locate the Active Site of This Class of Enzyme
Structure, 11, 2003
1OFN
DownloadVisualize
BU of 1ofn by Molmil
Purification, crystallisation and preliminary structural studies of dTDP-4-keto-6-deoxy-glucose-5-epimerase (EvaD) from Amycolatopsis orientalis; the fourth enzyme in the dTDP-L-epivancosamine biosynthetic pathway.
Descriptor: GLYCEROL, PCZA361.16
Authors:Merkel, A.B, Naismith, J.H.
Deposit date:2003-04-17
Release date:2004-04-15
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Purification, Crystallization and Preliminary Structural Studies of Dtdp-4-Keto-6-Deoxy-Glucose-5-Epimerase (Evad) from Amycolatopsis Orientalis, the Fourth Enzyme in the Dtdp-L-Epivancosamine Biosynthetic Pathway.
Acta Crystallogr.,Sect.D, 58, 2002
1OI6
DownloadVisualize
BU of 1oi6 by Molmil
Structure determination of the TMP-complex of EvaD
Descriptor: GLYCEROL, PCZA361.16, THYMIDINE-5'-PHOSPHATE
Authors:Merkel, A.B, Naismith, J.H.
Deposit date:2003-06-09
Release date:2004-06-03
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:The Position of a Key Tyrosine in Dtdp-4-Keto-6-Deoxy-D-Glucose-5-Epimerase (Evad) Alters the Substrate Profile for This Rmlc-Like Enzyme
J.Biol.Chem., 279, 2004
9KYN
DownloadVisualize
BU of 9kyn by Molmil
artificial dinuclear Cu-bound metalloprotein 3 (D3:Cu)
Descriptor: COPPER (II) ION, dTDP-4-dehydrorhamnose 3,5-epimerase
Authors:Jeong, W.J, Song, W.J.
Deposit date:2024-12-09
Release date:2025-07-02
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Metal-Installer: A protein designer tool to create metal-binding sites
To Be Published
9JA4
DownloadVisualize
BU of 9ja4 by Molmil
artificial dinuclear Zn-bound metalloprotein 2 (D2:Zn)
Descriptor: ZINC ION, dTDP-4-dehydrorhamnose 3,5-epimerase
Authors:Jeong, W.J, Song, W.J.
Deposit date:2024-08-24
Release date:2025-07-02
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Metal-Installer: A protein designer tool to create metal-binding sites
To Be Published
9J9Q
DownloadVisualize
BU of 9j9q by Molmil
artificial mononuclear Cu-bound metalloprotein 6 (M6:Cu)
Descriptor: COPPER (II) ION, dTDP-4-dehydrorhamnose 3,5-epimerase
Authors:Jeong, W.J, Song, W.J.
Deposit date:2024-08-23
Release date:2025-07-02
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Metal-Installer: A protein designer tool to create metal-binding sites
To Be Published
9J9V
DownloadVisualize
BU of 9j9v by Molmil
artificial dinuclear Fe-bound metalloprotein 2 (D2:Fe)
Descriptor: FE (III) ION, dTDP-4-dehydrorhamnose 3,5-epimerase
Authors:Jeong, W.J, Song, W.J.
Deposit date:2024-08-23
Release date:2025-07-02
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Metal-Installer: A protein designer tool to create metal-binding sites
To Be Published
9J9R
DownloadVisualize
BU of 9j9r by Molmil
artificial mononuclear Zn-bound metalloprotein 6 (M6:Zn)
Descriptor: ZINC ION, dTDP-4-dehydrorhamnose 3,5-epimerase
Authors:Jeong, W.J, Song, W.J.
Deposit date:2024-08-23
Release date:2025-07-02
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Metal-Installer: A protein designer tool to create metal-binding sites
To Be Published

238582

PDB entries from 2025-07-09

PDB statisticsPDBj update infoContact PDBjnumon