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3ZK2
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BU of 3zk2 by Molmil
Crystal structure of the sodium binding rotor ring at pH 8.7
Descriptor: ATP SYNTHASE SUBUNIT C, DECYL-BETA-D-MALTOPYRANOSIDE, SODIUM ION
Authors:Schulz, S, Meier, T, Yildiz, O.
Deposit date:2013-01-21
Release date:2013-05-29
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.63 Å)
Cite:A new type of Na(+)-driven ATP synthase membrane rotor with a two-carboxylate ion-coupling motif.
PLoS Biol., 11, 2013
4BEM
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BU of 4bem by Molmil
Crystal structure of the F-type ATP synthase c-ring from Acetobacterium woodii.
Descriptor: ACETATE ION, F1FO ATPASE C1 SUBUNIT, F1FO ATPASE C2 SUBUNIT, ...
Authors:Matthies, D, Meier, T, Yildiz, O.
Deposit date:2013-03-11
Release date:2014-03-26
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:High-Resolution Structure and Mechanism of an F/V-Hybrid Rotor Ring in a Na+-Coupled ATP Synthase
Nat.Commun., 5, 2014
3ZK1
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BU of 3zk1 by Molmil
Crystal structure of the sodium binding rotor ring at pH 5.3
Descriptor: ATP SYNTHASE SUBUNIT C, DECYL-BETA-D-MALTOPYRANOSIDE, DODECYL-BETA-D-MALTOSIDE, ...
Authors:Schulz, S, Meier, T, Yildiz, O.
Deposit date:2013-01-21
Release date:2013-05-29
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:A New Type of Na(+)-Driven ATP Synthase Membrane Rotor with a Two-Carboxylate Ion-Coupling Motif.
Plos Biol., 11, 2013
5BQ6
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BU of 5bq6 by Molmil
Structure of the yeast F1FO ATPase C10 ring with oligomycin B
Descriptor: ATP synthase subunit 9, mitochondrial, oligomycin B
Authors:Symersky, J, Xu, T, Mueller, D.M.
Deposit date:2015-05-28
Release date:2015-08-26
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of the yeast F1FO ATPase C10 ring with oligomycin B
To be Published
5BQJ
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BU of 5bqj by Molmil
Structure of the yeast F1FO ATPase C10 ring with 21-hydroxy-oligomycin
Descriptor: 21-hydroxy-oligomycin, ATP synthase subunit 9, mitochondrial
Authors:Symersky, J, Xu, T, Mueller, D.M.
Deposit date:2015-05-29
Release date:2015-08-26
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of the yeast F1FO ATPase C10 ring with 21-hydroxy-oligomycin
To be Published
3ZO6
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BU of 3zo6 by Molmil
Crystal structure of Bacillus pseudofirmus OF4 mutant ATP synthase c12 ring.
Descriptor: ATP synthase subunit c
Authors:Preiss, L, Yildiz, O, Meier, T.
Deposit date:2013-02-20
Release date:2013-05-01
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (4.104 Å)
Cite:The c-ring stoichiometry of ATP synthase is adapted to cell physiological requirements of alkaliphilic Bacillus pseudofirmus OF4.
Proc. Natl. Acad. Sci. U.S.A., 110, 2013
5BQA
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BU of 5bqa by Molmil
Structure of the yeast F1FO ATPase C10 ring with oligomycin C
Descriptor: ATP synthase subunit 9, mitochondrial, oligomycin C
Authors:Symersky, J, Xu, T, Mueller, D.M.
Deposit date:2015-05-28
Release date:2015-08-26
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of the yeast F1FO ATPase C10 ring with oligomycin C
To be Published
5BPS
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BU of 5bps by Molmil
Structure of the yeast F1FO ATPase C10 ring with oligomycin A
Descriptor: ATP synthase subunit 9, mitochondrial, Oligomycin A
Authors:Symersky, J, Xu, T, Mueller, D.M.
Deposit date:2015-05-28
Release date:2015-08-26
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of the yeast F1FO ATPase C10 ring with oligomycin A
To be Published
4CBK
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BU of 4cbk by Molmil
The c-ring ion binding site of the ATP synthase from Bacillus pseudofirmus OF4 is adapted to alkaliphilic cell physiology
Descriptor: ATP SYNTHASE SUBUNIT C, DODECYL-BETA-D-MALTOSIDE, SODIUM ION, ...
Authors:Preiss, L, Yildiz, O, Meier, T.
Deposit date:2013-10-14
Release date:2014-04-23
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.42 Å)
Cite:The C-Ring Ion-Binding Site of the ATP Synthase from Bacillus Pseudofirmus of4 is Adapted to Alkaliphilic Lifestyle.
Mol.Microbiol., 92, 2014
4CBJ
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BU of 4cbj by Molmil
The c-ring ion binding site of the ATP synthase from Bacillus pseudofirmus OF4 is adapted to alkaliphilic cell physiology
Descriptor: ATP SYNTHASE SUBUNIT C, DODECYL-BETA-D-MALTOSIDE, TRIS(HYDROXYETHYL)AMINOMETHANE, ...
Authors:Preiss, L, Yildiz, O, Meier, T.
Deposit date:2013-10-14
Release date:2014-05-28
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The C-Ring Ion-Binding Site of the ATP Synthase from Bacillus Pseudofirmus of4 is Adapted to Alkaliphilic Lifestyle.
Mol.Microbiol., 92, 2014
6N2D
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BU of 6n2d by Molmil
Bacillus PS3 ATP synthase membrane region
Descriptor: ATP synthase subunit a, ATP synthase subunit b, ATP synthase subunit c
Authors:Guo, H, Rubinstein, J.L.
Deposit date:2018-11-12
Release date:2019-02-20
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structure of a bacterial ATP synthase.
Elife, 8, 2019
4UTQ
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A structural model of the active ribosome-bound membrane protein insertase YidC
Descriptor: ATP SYNTHASE SUBUNIT C, MEMBRANE PROTEIN INSERTASE YIDC
Authors:Wickles, S, Singharoy, A, Andreani, J, Seemayer, S, Bischoff, L, Berninghausen, O, Soeding, J, Schulten, K, vanderSluis, E.O, Beckmann, R.
Deposit date:2014-07-22
Release date:2014-07-30
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (8 Å)
Cite:A Structural Model of the Active Ribosome-Bound Membrane Protein Insertase Yidc.
Elife, 3, 2014
6PE4
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BU of 6pe4 by Molmil
Yeast Vo motor in complex with 1 VopQ molecule
Descriptor: Cation transporter, Uncharacterized protein YPR170W-B, V-type proton ATPase subunit a, ...
Authors:Peng, W, Li, Y, Tomchick, D.R, Orth, K.
Deposit date:2019-06-20
Release date:2020-05-20
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:A distinct inhibitory mechanism of the V-ATPase by Vibrio VopQ revealed by cryo-EM.
Nat.Struct.Mol.Biol., 27, 2020
6PE5
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BU of 6pe5 by Molmil
Yeast Vo motor in complex with 2 VopQ molecules
Descriptor: Cation transporter, Uncharacterized protein YPR170W-B, V-type proton ATPase subunit a, ...
Authors:Peng, W, Li, Y, Tomchick, D.R, Orth, K.
Deposit date:2019-06-20
Release date:2020-05-20
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:A distinct inhibitory mechanism of the V-ATPase by Vibrio VopQ revealed by cryo-EM.
Nat.Struct.Mol.Biol., 27, 2020
6C6L
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BU of 6c6l by Molmil
Yeast Vacuolar ATPase Vo in lipid nanodisc
Descriptor: V-type proton ATPase subunit a, vacuolar isoform, V-type proton ATPase subunit c, ...
Authors:Roh, S, Stam, N.J, Hryc, C, Couoh-Cardel, S, Pintilie, G, Chiu, W, Wilkens, S.
Deposit date:2018-01-19
Release date:2018-03-21
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:The 3.5- angstrom CryoEM Structure of Nanodisc-Reconstituted Yeast Vacuolar ATPase VoProton Channel.
Mol. Cell, 69, 2018
5TJ5
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BU of 5tj5 by Molmil
Atomic model for the membrane-embedded motor of a eukaryotic V-ATPase
Descriptor: V-type proton ATPase subunit a, V-type proton ATPase subunit c, V-type proton ATPase subunit c', ...
Authors:Mazhab-Jafari, M.T, Rohou, A, Schmidt, C, Bueler, S.A, Benlekbir, S, Robinson, C.V, Rubinstein, J.L.
Deposit date:2016-10-03
Release date:2016-10-26
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Atomic model for the membrane-embedded VO motor of a eukaryotic V-ATPase.
Nature, 539, 2016
6TMJ
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BU of 6tmj by Molmil
Cryo-EM structure of Toxoplasma gondii mitochondrial ATP synthase dimer, rotor-stator model
Descriptor: ATP synthase subunit delta, ATP synthase subunit epsilon, ATP synthase subunit gamma, ...
Authors:Muhleip, A, Kock Flygaard, R, Amunts, A.
Deposit date:2019-12-04
Release date:2020-12-16
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:ATP synthase hexamer assemblies shape cristae of Toxoplasma mitochondria.
Nat Commun, 12, 2021
6M0S
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BU of 6m0s by Molmil
3.6A Yeast Vo state3 prime
Descriptor: Uncharacterized protein YPR170W-B, V-type proton ATPase subunit a, vacuolar isoform, ...
Authors:Roh, S.H, Shekhar, M, Pintilie, G, Chipot, C, Wilkens, S, SIngharoy, A, Chiu, W.
Deposit date:2020-02-22
Release date:2020-11-04
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Cryo-EM and MD infer water-mediated proton transport and autoinhibition mechanisms of V o complex.
Sci Adv, 6, 2020
6LY9
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BU of 6ly9 by Molmil
The membrane-embedded Vo domain of V/A-ATPase from Thermus thermophilus
Descriptor: V-type ATP synthase subunit C, V-type ATP synthase subunit E, V-type ATP synthase subunit I, ...
Authors:Kishikawa, J, Nakanishi, A, Furuta, A, Kato, T, Namba, K, Tamakoshi, M, Mitsuoka, K, Yokoyama, K.
Deposit date:2020-02-13
Release date:2020-09-09
Last modified:2020-09-30
Method:ELECTRON MICROSCOPY (3.93 Å)
Cite:Mechanical inhibition of isolated V o from V/A-ATPase for proton conductance.
Elife, 9, 2020
6M0R
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BU of 6m0r by Molmil
2.7A Yeast Vo state3
Descriptor: (6~{E},10~{E},14~{E},18~{E},22~{E},26~{E},30~{R})-2,6,10,14,18,22,26,30-octamethyldotriaconta-2,6,10,14,18,22,26-heptaene, 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, PYROPHOSPHATE, ...
Authors:Roh, S.H, Shekhar, M, Pintilie, G, Chipot, C, Wilkens, S, Singharoy, A, Chiu, W.
Deposit date:2020-02-22
Release date:2020-11-04
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Cryo-EM and MD infer water-mediated proton transport and autoinhibition mechanisms of V o complex.
Sci Adv, 6, 2020
8EAT
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BU of 8eat by Molmil
Yeast VO missing subunits a, e, and f in complex with Vma12-22p
Descriptor: V-type proton ATPase subunit F, V-type proton ATPase subunit c, V-type proton ATPase subunit c', ...
Authors:Wang, H, Bueler, S.A, Rubinstein, J.L.
Deposit date:2022-08-29
Release date:2022-11-02
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural basis of V-ATPase V O region assembly by Vma12p, 21p, and 22p.
Proc.Natl.Acad.Sci.USA, 120, 2023
8EAS
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BU of 8eas by Molmil
Yeast VO in complex with Vma12-22p
Descriptor: V-type proton ATPase assembly factor Vma12p, V-type proton ATPase subunit F, V-type proton ATPase subunit a, ...
Authors:Wang, H, Bueler, S.A, Rubinstein, J.L.
Deposit date:2022-08-29
Release date:2022-11-02
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Structural basis of V-ATPase V O region assembly by Vma12p, 21p, and 22p.
Proc.Natl.Acad.Sci.USA, 120, 2023
8EAU
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BU of 8eau by Molmil
Yeast VO in complex with Vma21p
Descriptor: V-type proton ATPase subunit a, vacuolar isoform, V-type proton ATPase subunit c, ...
Authors:Wang, H, Bueler, S.A, Rubinstein, J.L.
Deposit date:2022-08-29
Release date:2022-11-02
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural basis of V-ATPase V O region assembly by Vma12p, 21p, and 22p.
Proc.Natl.Acad.Sci.USA, 120, 2023
6WLW
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BU of 6wlw by Molmil
The Vo region of human V-ATPase in state 1 (focused refinement)
Descriptor: (2~{S})-2-$l^{4}-azanyl-3-[[(2~{R})-3-octadecanoyloxy-2-oxidanyl-propoxy]-oxidanyl-oxidanylidene-$l^{6}-phosphanyl]oxy-propanoic acid, 1,2-DICAPROYL-SN-PHOSPHATIDYL-L-SERINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Wang, L, Wu, H, Fu, T.-M.
Deposit date:2020-04-20
Release date:2020-11-11
Last modified:2020-11-25
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structures of a Complete Human V-ATPase Reveal Mechanisms of Its Assembly.
Mol.Cell, 80, 2020
8AP9
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rotor of the Trypanosoma brucei mitochondrial ATP synthase dimer
Descriptor: ATP synthase gamma subunit, ATP synthase subunit epsilon, mitochondrial, ...
Authors:Muehleip, A, Gahura, O, Zikova, A, Amunts, A.
Deposit date:2022-08-09
Release date:2022-10-26
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:An ancestral interaction module promotes oligomerization in divergent mitochondrial ATP synthases.
Nat Commun, 13, 2022

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PDB entries from 2024-09-18

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