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2FBB
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Crystal Structure Analysis of Hexagonal Lysozyme
Descriptor: Lysozyme C, NITRATE ION, SODIUM ION
Authors:Brinkmann, C, Weiss, M.S, Weckert, E.
Deposit date:2005-12-09
Release date:2006-03-28
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.46 Å)
Cite:The structure of the hexagonal crystal form of hen egg-white lysozyme.
Acta Crystallogr.,Sect.D, 62, 2006
2L2U
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NMR Solution Structures of +3 (5' staggered) Bistranded Abasic Site Lesions in DNA
Descriptor: DNA (5'-D(*CP*AP*GP*CP*GP*(3DR)P*GP*TP*AP*TP*AP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*TP*AP*(3DR)P*AP*CP*AP*CP*GP*CP*TP*G)-3')
Authors:Hazel, R.D, de los Santos, C.
Deposit date:2010-08-27
Release date:2010-11-03
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:NMR solution structures of clustered abasic site lesions in DNA: structural differences between 3'-staggered (-3) and 5'-staggered (+3) bistranded lesions.
Biochemistry, 49, 2010
2LT7
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BU of 2lt7 by Molmil
Solution NMR structure of Kaiso zinc finger DNA binding domain in complex with Kaiso binding site DNA
Descriptor: DNA (5'-D(*CP*GP*TP*TP*AP*TP*TP*GP*GP*CP*AP*GP*GP*AP*AP*GP*CP*AP*C)-3'), DNA (5'-D(*GP*TP*GP*CP*TP*TP*CP*CP*TP*GP*CP*CP*AP*AP*TP*AP*AP*CP*G)-3'), Transcriptional regulator Kaiso, ...
Authors:Buck-Koehntop, B.A, Stanfield, R.L, Ekiert, D.C, Martinez-Yamout, M.A, Dyson, H, Wilson, I.A, Wright, P.E.
Deposit date:2012-05-15
Release date:2012-09-05
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Molecular basis for recognition of methylated and specific DNA sequences by the zinc finger protein Kaiso.
Proc.Natl.Acad.Sci.USA, 109, 2012
1TUT
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BU of 1tut by Molmil
J4/5 Loop from the Candida albicans and Candida dubliniensis Group I Introns
Descriptor: 5'-R(*GP*AP*GP*GP*AP*AP*GP*GP*CP*GP*A)-3', 5'-R(*UP*CP*GP*UP*UP*AP*AP*UP*CP*UP*C)-3'
Authors:Znosko, B.M, Kennedy, S.D, Wille, P.C, Krugh, T.R, Turner, D.H.
Deposit date:2004-06-25
Release date:2004-12-28
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structural Features and Thermodynamics of the J4/5 Loop from the Candida albicans and Candida dubliniensis Group I Introns.
Biochemistry, 43, 2004
3TFS
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BU of 3tfs by Molmil
Ternary complex structure of DNA polymerase beta with a gapped DNA substrate and a, b dAMP(CFH)PP in the active site: Stereoselective binding of (S) isomer
Descriptor: 2'-deoxy-5'-O-[(S)-{(S)-fluoro[(S)-hydroxy(phosphonooxy)phosphoryl]methyl}(hydroxy)phosphoryl]adenosine, CHLORIDE ION, DNA (5'-D(*CP*CP*GP*AP*CP*TP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), ...
Authors:Chamberlain, B.T, Batra, V.K, Beard, W.A, Kadina, A.P, Shock, D.D, Kashemirov, B.A, McKenna, C.E, Goodman, M.F, Wilson, S.H.
Deposit date:2011-08-16
Release date:2012-03-21
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Stereospecific Formation of a Ternary Complex of (S)-alpha, beta-Fluoromethylene-dATP with DNA Pol beta.
Chembiochem, 13, 2012
2PLC
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BU of 2plc by Molmil
PHOSPHATIDYLINOSITOL-SPECIFIC PHOSPHOLIPASE C FROM LISTERIA MONOCYTOGENES
Descriptor: PHOSPHATIDYLINOSITOL-SPECIFIC PHOSPHOLIPASE C
Authors:Heinz, D.W, Moser, J.
Deposit date:1997-07-09
Release date:1998-01-14
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the phosphatidylinositol-specific phospholipase C from the human pathogen Listeria monocytogenes.
J.Mol.Biol., 273, 1997
4HYK
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BU of 4hyk by Molmil
Dbh Ternary Complex (substrates partially disordered)
Descriptor: DNA (5'-D(*GP*GP*GP*AP*AP*GP*CP*CP*GP*G)-3'), DNA (5'-D(*TP*TP*CP*CP*GP*CP*CP*CP*CP*GP*GP*CP*TP*TP*CP*CP*C)-3'), DNA polymerase IV
Authors:Pata, J.D, Wilson, R.C.
Deposit date:2012-11-13
Release date:2013-01-02
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.802 Å)
Cite:Y-family polymerase conformation is a major determinant of fidelity and translesion specificity.
Structure, 21, 2013
2L2V
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NMR Solution Structures of -3 (3' staggered) Bistranded Abasic Site Lesions in DNA
Descriptor: DNA_(5'-D(*CP*AP*GP*CP*TP*AP*TP*GP*(3DR)P*GP*AP*AP*GP*C)-3')_, DNA_(5'-D(*GP*CP*TP*TP*CP*AP*CP*AP*(3DR)P*AP*GP*CP*TP*G)-3')_
Authors:Hazel, R.D, de los Santos, C.
Deposit date:2010-08-27
Release date:2011-07-13
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:NMR solution structures of clustered abasic site lesions in DNA: structural differences between 3'-staggered (-3) and 5'-staggered (+3) bistranded lesions.
Biochemistry, 49, 2010
2LBY
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G-quadruplex structure formed at the 5'-end of NHEIII_1 element in human c-MYC promoter
Descriptor: DNA (5'-D(*TP*AP*GP*GP*GP*AP*GP*GP*GP*TP*AP*GP*GP*GP*AP*GP*GP*GP*T)-3')
Authors:Mathad, R, Hatzakis, E, Yang, D.
Deposit date:2011-04-07
Release date:2012-02-22
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:c-MYC promoter G-quadruplex formed at the 5'-end of NHE III1 element: insights into biological relevance and parallel-stranded G-quadruplex stability.
Nucleic Acids Res., 39, 2011
2FBN
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BU of 2fbn by Molmil
Plasmodium falciparum putative FK506-binding protein PFL2275c, C-terminal TPR-containing domain
Descriptor: 70 kDa peptidylprolyl isomerase, putative
Authors:Dong, A, Lew, J, Koeieradzki, I, Sundararajan, E, Melone, M, Wasney, G, Zhao, Y, Edwards, A.M, Arrowsmith, C.H, Weigelt, J, Sundstrom, M, Bochkarev, A, Hui, R, Hills, T, Structural Genomics Consortium (SGC)
Deposit date:2005-12-09
Release date:2006-01-24
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Crystallographic structure of the tetratricopeptide repeat domain of Plasmodium falciparum FKBP35 and its molecular interaction with Hsp90 C-terminal pentapeptide.
Protein Sci., 18, 2009
1TKW
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BU of 1tkw by Molmil
The transient complex of poplar plastocyanin with turnip cytochrome f determined with paramagnetic NMR
Descriptor: COPPER (II) ION, Cytochrome f, HEME C, ...
Authors:Lange, C, Cornvik, T, Diaz-Moreno, I, Ubbink, M.
Deposit date:2004-06-09
Release date:2005-05-24
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:The transient complex of poplar plastocyanin with cytochrome f: effects of ionic strength and pH
Biochim.Biophys.Acta, 1707, 2005
1M6F
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Strong Binding in the DNA Minor Groove by an Aromatic Diamidine With a Shape That Does Not Match the Curvature of the Groove
Descriptor: 3-[C-[N'-(3-CARBAMIMIDOYL-BENZYLIDENIUM)-HYDRAZINO]-[[AMINOMETHYLIDENE]AMINIUM]-IMINOMETHYL]-BENZAMIDINIUM, DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'), MAGNESIUM ION
Authors:Nguyen, B, Lee, M.P.H, Hamelberg, D, Joubert, A, Bailly, C, Brun, R, Neidle, S, Wilson, W.D.
Deposit date:2002-07-16
Release date:2002-11-15
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Strong Binding in the DNA Minor Groove by an Aromatic Diamidine With a Shape That Does Not Match the Curvature of the Groove
J.Am.Chem.Soc., 124, 2002
107D
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BU of 107d by Molmil
SOLUTION STRUCTURE OF THE COVALENT DUOCARMYCIN A-DNA DUPLEX COMPLEX
Descriptor: 4-HYDROXY-2,8-DIMETHYL-1-OXO-6-(4,5,6-TRIMETHOXY-1H-INDOLE-2-CARBONYL)-1,2,3,6,7,8-HEXAHYDRO-3,6-DIAZA-AS-INDACENE-2-CARBOXYLIC ACID METHYL ESTER, DNA (5'-D(*CP*CP*TP*TP*TP*TP*C)-3'), DNA (5'-D(*GP*AP*AP*AP*AP*GP*G)-3')
Authors:Lin, C.H, Patel, D.J.
Deposit date:1995-01-17
Release date:1995-05-08
Last modified:2024-03-13
Method:SOLUTION NMR
Cite:Solution structure of the covalent duocarmycin A-DNA duplex complex.
J.Mol.Biol., 248, 1995
1AP4
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BU of 1ap4 by Molmil
REGULATORY DOMAIN OF HUMAN CARDIAC TROPONIN C IN THE CALCIUM-SATURATED STATE, NMR, 40 STRUCTURES
Descriptor: CALCIUM ION, CARDIAC N-TROPONIN C
Authors:Li, M.X, Spyracopoulos, L, Sia, S.K, Gagne, S.M, Chandra, M, Solaro, R.J, Sykes, B.D.
Deposit date:1997-07-24
Release date:1998-07-15
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Calcium-induced structural transition in the regulatory domain of human cardiac troponin C.
Biochemistry, 36, 1997
1KBM
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BU of 1kbm by Molmil
SOLUTION STRUCTURE OF AN 11-MER DNA DUPLEX CONTAINING 6-THIOGUANINE OPPOSITE THYMINE
Descriptor: 5'-D(*CP*GP*TP*AP*CP*(S6G)P*CP*AP*TP*GP*C)-3', 5'-D(*GP*CP*AP*TP*GP*TP*GP*TP*AP*CP*G)-3'
Authors:Bohon, J, De Los Santos, C.R.
Deposit date:2001-11-06
Release date:2001-11-28
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structural effect of the anticancer agent 6-thioguanine on duplex DNA.
Nucleic Acids Res., 31, 2003
1KB1
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BU of 1kb1 by Molmil
SOLUTION STRUCTURE OF AN 11-MER DNA DUPLEX CONTAINING 6-THIOGUANINE OPPOSITE CYTOSINE
Descriptor: 5'-D(*CP*GP*TP*AP*CP*(S6G)P*CP*AP*TP*GP*C)-3', 5'-D(*GP*CP*AP*TP*GP*CP*GP*TP*AP*CP*G)-3'
Authors:Bohon, J, De Los Santos, C.R.
Deposit date:2001-11-05
Release date:2001-11-28
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structural effect of the anticancer agent 6-thioguanine on duplex DNA.
Nucleic Acids Res., 31, 2003
2MYY
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BU of 2myy by Molmil
Solution structure of an MbtH-like protein from Mycobacterium marinum, Seattle Structural Genomics Center for Infectious Disease target MymaA.01649.c
Descriptor: Conserved hypothetical MbtH-like protein
Authors:Buchko, G.W, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2015-02-02
Release date:2015-04-01
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution structure of an MbtH-like protein from Mycobacterium marinum, Seattle Structural Genomics Center for Infectious Disease target MymaA.01649.c
To be Published
2BLL
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BU of 2bll by Molmil
Apo-structure of the C-terminal decarboxylase domain of ArnA
Descriptor: PROTEIN YFBG
Authors:Williams, G.J, Breazeale, S.D, Raetz, C.R.H, Naismith, J.H.
Deposit date:2005-03-07
Release date:2005-04-08
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure and Function of Both Domains of Arna, a Dual Function Decarboxylase and a Formyltransferase, Involved in 4-Amino-4-Deoxy-L- Arabinose Biosynthesis.
J.Biol.Chem., 280, 2005
2MZ9
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BU of 2mz9 by Molmil
Solution structure of oxidized triheme cytochrome PpcA from Geobacter sulfurreducens
Descriptor: HEME C, PpcA
Authors:Morgado, L, Bruix, M, Pokkuluri, R, Salgueiro, C.A, Turner, D.L.
Deposit date:2015-02-08
Release date:2016-02-10
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Redox- and pH-linked conformational changes in triheme cytochrome PpcA from Geobacter sulfurreducens.
Biochem. J., 474, 2017
1C7W
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BU of 1c7w by Molmil
NMR SOLUTION STRUCTURE OF THE CALCIUM-BOUND C-TERMINAL DOMAIN (W81-S161) OF CALCIUM VECTOR PROTEIN FROM AMPHIOXUS
Descriptor: CALCIUM VECTOR PROTEIN
Authors:Theret, I, Baladi, S, Cox, J.A, Sakamoto, H, Craescu, C.T.
Deposit date:2000-03-27
Release date:2000-04-12
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Sequential calcium binding to the regulatory domain of calcium vector protein reveals functional asymmetry and a novel mode of structural rearrangement.
Biochemistry, 39, 2000
1C7V
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NMR SOLUTION STRUCTURE OF THE CALCIUM-BOUND C-TERMINAL DOMAIN (W81-S161) OF CALCIUM VECTOR PROTEIN FROM AMPHIOXUS
Descriptor: CALCIUM VECTOR PROTEIN
Authors:Theret, I, Baladi, S, Cox, J.A, Sakamoto, H, Craescu, C.T.
Deposit date:2000-03-27
Release date:2000-04-12
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Sequential calcium binding to the regulatory domain of calcium vector protein reveals functional asymmetry and a novel mode of structural rearrangement.
Biochemistry, 39, 2000
2NBQ
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BU of 2nbq by Molmil
NMR Structure of the C-Terminal Domain of human APOBEC3B
Descriptor: DNA dC->dU-editing enzyme APOBEC-3B, ZINC ION
Authors:Byeon, I.L, Byeon, C, Gronenborn, A.M.
Deposit date:2016-03-09
Release date:2016-06-01
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Nuclear Magnetic Resonance Structure of the APOBEC3B Catalytic Domain: Structural Basis for Substrate Binding and DNA Deaminase Activity.
Biochemistry, 55, 2016
2JT8
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BU of 2jt8 by Molmil
Solution structure of the F153-to-5-flurotryptophan mutant of human cardiac troponin C
Descriptor: Troponin C, slow skeletal and cardiac muscles
Authors:Wang, X, Mercier, P, Letourneau, P, Sykes, B.D.
Deposit date:2007-07-20
Release date:2007-08-07
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Effects of Phe-to-Trp mutation and fluorotryptophan incorporation on the solution structure of cardiac troponin C, and analysis of its suitability as a potential probe for in situ NMR studies
Protein Sci., 14, 2005
3S7W
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BU of 3s7w by Molmil
Structure of the TvNiRb form of Thioalkalivibrio nitratireducens cytochrome c nitrite reductase with an oxidized Gln360 in a complex with hydroxylamine
Descriptor: AZIDE ION, CALCIUM ION, Eight-heme nitrite reductase, ...
Authors:Trofimov, A.A, Polyakov, K.M, Tikhonova, T.V, Popov, V.O.
Deposit date:2011-05-27
Release date:2011-07-27
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Structure of the TvNiRb form of Thioalkalivibrio nitratireducens cytochrome c nitrite reductase with an oxidized Gln360 in a complex with hydroxylamine
To be Published
1KOA
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BU of 1koa by Molmil
TWITCHIN KINASE FRAGMENT (C.ELEGANS), AUTOREGULATED PROTEIN KINASE AND IMMUNOGLOBULIN DOMAINS
Descriptor: TWITCHIN
Authors:Kobe, B, Heierhorst, J, Feil, S.C, Parker, M.W, Benian, G.M, Weiss, K.R, Kemp, B.E.
Deposit date:1996-06-28
Release date:1997-03-12
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Giant protein kinases: domain interactions and structural basis of autoregulation.
EMBO J., 15, 1996

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