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5JMV
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BU of 5jmv by Molmil
Crystal structure of mjKae1-pfuPcc1 complex
Descriptor: ADENOSINE MONOPHOSPHATE, MAGNESIUM ION, Probable bifunctional tRNA threonylcarbamoyladenosine biosynthesis protein, ...
Authors:Wan, L, Sicheri, F.
Deposit date:2016-04-29
Release date:2016-07-06
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.3864696 Å)
Cite:Structural and functional characterization of KEOPS dimerization by Pcc1 and its role in t6A biosynthesis.
Nucleic Acids Res., 44, 2016
8ZGA
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BU of 8zga by Molmil
F-degron fused ZZ-domain of the Arabidopsis thaliana E3 ubiquitin-protein ligase PRT1
Descriptor: F-degron,E3 ubiquitin-protein ligase PRT1, MAGNESIUM ION, ZINC ION
Authors:Yang, W.S, Song, H.K.
Deposit date:2024-05-09
Release date:2025-05-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis for the recognition of type-2 N-degron by PRT1 plant N-recognin
To Be Published
8ZGO
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BU of 8zgo by Molmil
CryoEM structure of monomeric quinol dependent nitric oxide reductase from Neisseria meningitidis
Descriptor: CALCIUM ION, FE (III) ION, Nitric-oxide reductase, ...
Authors:Gopalasingam, C.C, Shiro, Y, Tosha, T.
Deposit date:2024-05-09
Release date:2025-05-14
Method:ELECTRON MICROSCOPY (2.25 Å)
Cite:CryoEM structure of monomeric quinol dependent nitric oxide reductase from Neisseria meningitidis
To Be Published
8ZD7
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BU of 8zd7 by Molmil
NMR structure of the CGG-dsDNA-sND complex
Descriptor: DNA (5'-D(*CP*AP*TP*TP*CP*GP*GP*TP*TP*AP*G)-3'), DNA (5'-D(*CP*TP*AP*AP*CP*GP*GP*AP*AP*TP*G)-3'), ~{N}-(7-methyl-1,8-naphthyridin-2-yl)-2-[[2-[(7-methyl-1,8-naphthyridin-2-yl)amino]-2-oxidanylidene-ethyl]amino]ethanamide
Authors:Sakurabayashi, S, Furuita, K, Yamada, T, Nomura, M, Nakatani, K, Kojima, C.
Deposit date:2024-05-01
Release date:2025-04-30
Method:SOLUTION NMR
Cite:NMR structure of the CGG-dsDNA-sND complex
To Be Published
8ZYM
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BU of 8zym by Molmil
Complex structure of 60 Fab bound to DS2 prefusion F trimer
Descriptor: Fusion glycoprotein F0,Expression tag, antibody light chain, antidody heavy chain
Authors:Wang, X, Ge, J, Guo, F.
Deposit date:2024-06-18
Release date:2025-04-30
Method:ELECTRON MICROSCOPY (3.23 Å)
Cite:DS2 designer pre-fusion F vaccine induces strong and protective antibody response against RSV infection.
Npj Vaccines, 9, 2024
5JD9
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BU of 5jd9 by Molmil
Bacillus cereus CotH kinase
Descriptor: 1,2-ETHANEDIOL, MAGNESIUM ION, Spore coat protein H
Authors:Tomchick, D.R, Tagliabracci, V.S, Sreelatha, A.
Deposit date:2016-04-15
Release date:2016-05-18
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Phosphorylation of spore coat proteins by a family of atypical protein kinases.
Proc.Natl.Acad.Sci.USA, 113, 2016
6LAW
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BU of 6law by Molmil
MicroED structure of proteinase K at 1.50A determained using crystal lamellas prepared by focused ion beam milling
Descriptor: Proteinase K, SULFATE ION
Authors:Zhou, H, Luo, Z, Li, X.
Deposit date:2019-11-13
Release date:2019-12-04
Last modified:2024-11-06
Method:ELECTRON CRYSTALLOGRAPHY (1.5 Å)
Cite:Using focus ion beam to prepare crystal lamella for electron diffraction.
J. Struct. Biol., 205, 2019
2HYT
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BU of 2hyt by Molmil
CRYSTAL STRUCTURE OF A TETR-FAMILY TRANSCRIPTIONAL REGULATOR (ECA1819) FROM PECTOBACTERIUM ATROSEPTICUM AT 1.64 A RESOLUTION
Descriptor: 1,2-ETHANEDIOL, TetR-family transcriptional regulator
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2006-08-07
Release date:2006-08-15
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Crystal structure of TetR-family transcriptional regulator (YP_049917.1) from Erwinia Cartovora Atroseptica SCRI1043 at 1.64 A resolution
To be published
8ZHV
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BU of 8zhv by Molmil
Structure of 3-amino-3-carboxyltransferase in complex with SAH and nocardicin G in the biosynthesis of nocardicins
Descriptor: 5'-thioadenosine, Isonocardicin synthase, Nocardicin G, ...
Authors:Gao, Y, Mori, T, Awakawa, T, Abe, I.
Deposit date:2024-05-11
Release date:2025-05-14
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Structure of 3-amino-3-carboxyltransferase in complex with SAH and nocardicin G in the biosynthesis of nocardicins
To Be Published
5JNT
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BU of 5jnt by Molmil
Crystal structure of human low molecular weight protein tyrosine phosphatase (LMPTP) type A complexed with MES
Descriptor: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, DIMETHYL SULFOXIDE, ...
Authors:Stanford, S.M, Aleshin, A.E, Liddington, R.C, Bankston, L, Cadwell, G, Bottini, N.
Deposit date:2016-04-30
Release date:2017-03-29
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Diabetes reversal by inhibition of the low-molecular-weight tyrosine phosphatase.
Nat. Chem. Biol., 13, 2017
2VGB
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BU of 2vgb by Molmil
HUMAN ERYTHROCYTE PYRUVATE KINASE
Descriptor: 1,6-di-O-phosphono-beta-D-fructofuranose, 2-PHOSPHOGLYCOLIC ACID, MANGANESE (II) ION, ...
Authors:Valentini, G, Chiarelli, L, Fortin, R, Dolzan, M, Galizzi, A, Abraham, D.J, Wang, C, Bianchi, P, Zanella, A, Mattevi, A.
Deposit date:2007-11-12
Release date:2007-11-20
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.73 Å)
Cite:Structure and Function of Human Erythrocyte Pyruvate Kinase. Molecular Basis of Nonspherocytic Hemolytic Anemia.
J.Biol.Chem., 277, 2002
8ZD2
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BU of 8zd2 by Molmil
NMR structure of the (CGG-dsDNA:ND=) 1:2 complex
Descriptor: DNA (5'-D(*CP*AP*TP*TP*CP*GP*GP*TP*TP*AP*G)-3'), DNA (5'-D(*CP*TP*AP*AP*CP*GP*GP*AP*AP*TP*G)-3'), ~{N}-(7-methyl-1,8-naphthyridin-2-yl)-3-[[3-[(7-methyl-1,8-naphthyridin-2-yl)amino]-3-oxidanylidene-propyl]amino]propanamide
Authors:Sakurabayashi, S, Furuita, K, Yamada, T, Nomura, M, Nakatani, K, Kojima, C.
Deposit date:2024-05-01
Release date:2025-04-30
Method:SOLUTION NMR
Cite:NMR structure of the (CGG-dsDNA:ND=) 1:2 complex
To Be Published
2I0H
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BU of 2i0h by Molmil
The structure of p38alpha in complex with an arylpyridazinone
Descriptor: 2-(3-{(2-CHLORO-4-FLUOROPHENYL)[1-(2-CHLOROPHENYL)-6-OXO-1,6-DIHYDROPYRIDAZIN-3-YL]AMINO}PROPYL)-1H-ISOINDOLE-1,3(2H)-DIONE, GLYCEROL, Mitogen-activated protein kinase 14
Authors:Natarajan, S.R, Heller, S.T, Nam, K, Singh, S.B, Scapin, G, Patel, S, Thompson, J.E, Fitzgerald, C.E, O'Keefe, S.J.
Deposit date:2006-08-10
Release date:2006-10-17
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:p38 MAP Kinase Inhibitors Part 6: 2-Arylpyridazin-3-ones as templates for inhibitor design.
Bioorg.Med.Chem.Lett., 16, 2006
8ZHC
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BU of 8zhc by Molmil
pre-frameshift complex of yeast 80S ribosome with eRF1 and mRNA of WNV
Descriptor: 25S rRNA (3393-MER), 5.8S rRNA (158-MER), 5S rRNA (121-MER), ...
Authors:Wu, M, Yuan, S.
Deposit date:2024-05-10
Release date:2025-05-21
Method:ELECTRON MICROSCOPY (2.3 Å)
Cite:Flexibilities and conservations in the structural basis of viral -1 programmed ribosomal frameshifting
To Be Published
8ZRU
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BU of 8zru by Molmil
Structure of human ECHS1 in apo state
Descriptor: Enoyl-CoA hydratase, mitochondrial, MAGNESIUM ION
Authors:Su, G, Xu, Y, Chen, B, Ju, K, Sun, X, Jin, Y, Liu, D, Chen, H, Zhang, S, Luan, X.
Deposit date:2024-06-05
Release date:2025-04-30
Last modified:2025-07-02
Method:ELECTRON MICROSCOPY (2.18 Å)
Cite:Structural and biochemical mechanism of short-chain enoyl-CoA hydratase (ECHS1) substrate recognition.
Commun Biol, 8, 2025
8ZG5
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BU of 8zg5 by Molmil
Drimenyl diphosphate synthase SsDMS_Y505I&D303A from Streptomyces showdoensis (Apo)
Descriptor: Squalene cyclase C-terminal domain-containing protein
Authors:Pan, X.M, Dong, S.M, Dong, L.B.
Deposit date:2024-05-09
Release date:2025-05-21
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Catalytic bases in class II terpene cyclases
To Be Published
8ZGV
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BU of 8zgv by Molmil
Drimenyl diphosphate synthase SsDMS_F248A&D303E from Streptomyces showdoensis in complex with farnesyl diphosphate (FPP) and Mg2+
Descriptor: FARNESYL DIPHOSPHATE, MAGNESIUM ION, Squalene cyclase C-terminal domain-containing protein
Authors:Pan, X.M, Dong, S.M, Dong, L.B.
Deposit date:2024-05-09
Release date:2025-05-21
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Catalytic bases in class II terpene cyclases
To Be Published
9B11
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BU of 9b11 by Molmil
In situ human unrotated hibernating without CCDC124 state 80S ribosome
Descriptor: 18S rRNA, 28S rRNA, 40S ribosomal protein S10, ...
Authors:Wei, Z, Yong, X.
Deposit date:2024-03-12
Release date:2025-04-30
Method:ELECTRON MICROSCOPY (2.77 Å)
Cite:In situ human unrotated hibernating without CCDC124 state 80S ribosome
To Be Published
8ZGW
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BU of 8zgw by Molmil
Drimenyl diphosphate synthase SsDMS_F248Y&D303E from Streptomyces showdoensis in complex with farnesyl diphosphate (FPP) and Mg2+
Descriptor: FARNESYL DIPHOSPHATE, MAGNESIUM ION, Squalene cyclase C-terminal domain-containing protein
Authors:Pan, X.M, Dong, S.M, Dong, L.B.
Deposit date:2024-05-09
Release date:2025-05-21
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:Catalytic bases in class II terpene cyclases
To Be Published
2I13
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BU of 2i13 by Molmil
Aart, a six finger zinc finger designed to recognize ANN triplets
Descriptor: 5'-D(*CP*AP*GP*AP*TP*GP*TP*AP*GP*GP*GP*AP*AP*AP*AP*GP*CP*CP*CP*GP*GP*G)-3', 5'-D(*GP*CP*CP*CP*GP*GP*GP*CP*TP*TP*TP*TP*CP*CP*CP*TP*AP*CP*AP*TP*CP*T)-3', Aart, ...
Authors:Horton, N.C, Segal, D.J, Bhakta, M, Crotty, J.W, Barbas III, C.F.
Deposit date:2006-08-12
Release date:2006-10-03
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Structure of Aart, a Designed Six-finger Zinc Finger Peptide, Bound to DNA.
J.Mol.Biol., 363, 2006
8ZKP
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BU of 8zkp by Molmil
Cryo-EM structure of the efflux transporter MmpL5/MmpS5 from Mycobacterium tuberculosis, C3 symmetry
Descriptor: (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, CARDIOLIPIN, Meromycolate extension acyl carrier protein, ...
Authors:Zhang, B, Xiong, Z, Rao, Z.
Deposit date:2024-05-17
Release date:2025-05-21
Method:ELECTRON MICROSCOPY (2.64 Å)
Cite:membrane transporter
To Be Published
5JI5
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BU of 5ji5 by Molmil
Crystal Structure of a Histone Deacetylase superfamily protein from Burkholderia phymatumphymatum
Descriptor: 1,2-ETHANEDIOL, BuphA.10154.a.B1, SODIUM ION, ...
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2016-04-21
Release date:2016-05-04
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structure of a Histone Deacetylase superfamily protein from Burkholderia phymatumphymatum
to be published
8ZM0
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BU of 8zm0 by Molmil
A self-assembled nanofiber
Descriptor: TYR-ALA-TRP-PHE
Authors:Shi, J.H, Fang, Y, Ma, D, Wang, H.M.
Deposit date:2024-05-21
Release date:2025-05-21
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Water-regulated viscosity-plasticity phase transitions in a peptide self-assembled muscle-like hydrogel
To Be Published
5JIB
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BU of 5jib by Molmil
Crystal structure of the Thermotoga maritima acetyl esterase (TM0077) complex with a substrate analog
Descriptor: Cephalosporin-C deacetylase, [(3S)-2-oxo-2,3-dihydro-1H-indol-3-yl]acetic acid
Authors:Manoj, N.
Deposit date:2016-04-22
Release date:2017-03-01
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Crystal structure of Thermotoga maritima acetyl esterase complex with a substrate analog: Insights into the distinctive substrate specificity in the CE7 carbohydrate esterase family
Biochem. Biophys. Res. Commun., 476, 2016
8ZNL
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BU of 8znl by Molmil
PD-L1 de novo designed binder with picomolar binding affinity
Descriptor: BROMIDE ION, PD-L1 de novo binder, Programmed cell death 1 ligand 1
Authors:Zhao, L.
Deposit date:2024-05-27
Release date:2025-06-04
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:PD-L1 de novo binder
To Be Published

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PDB entries from 2025-07-09

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