Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8VIW
DownloadVisualize
BU of 8viw by Molmil
Cryo-EM structure of heparosan synthase 2 from Pasteurella multocida with polysaccharide in the GlcNAc-T active site
Descriptor: Heparosan synthase B, MANGANESE (II) ION, URIDINE-5'-DIPHOSPHATE, ...
Authors:Krahn, J.M, Pedersen, L.C, Liu, J, Stancanelli, E, Borgnia, M, Vivarette, E.
Deposit date:2024-01-05
Release date:2024-07-24
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural and Functional Analysis of Heparosan Synthase 2 from Pasteurella multocida to Improve the Synthesis of Heparin
Acs Catalysis, 14, 2024
8VIU
DownloadVisualize
BU of 8viu by Molmil
The DNA 16-mer sequence 5'-GCTGCGTTAACGCAGC-3' bound by a DB1992 stacked dimer
Descriptor: (2M)-2-[(5P)-5-(5-carbamimidoylthiophen-2-yl)furan-2-yl]-1H-benzimidazole-6-carboximidamide, CALCIUM ION, DNA (5'-D(*GP*CP*TP*GP*CP*GP*TP*TP*AP*AP*CP*GP*CP*AP*GP*C)-3')
Authors:Terrell, J.R, Wilson, W.D.
Deposit date:2024-01-05
Release date:2024-10-02
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Structural Examination of DNA Minor Groove Binding by Diamidine Stacked Dimers
To Be Published
8VIS
DownloadVisualize
BU of 8vis by Molmil
Human TMPRSS11D complexed with a disulfide-linked autoinhibitory DDDDK peptide
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, MAGNESIUM ION, ...
Authors:Fraser, B.J, Dong, A, Ilyassov, O, Kenney, T, Li, Y.Y, Seitova, A, Li, Y, Hejazi, Z, Edwards, A, Benard, F, Arrowsmith, C.
Deposit date:2024-01-05
Release date:2024-01-31
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Structural basis of TMPRSS11D specificity and autocleavage activation
Biorxiv, 2024
8VIL
DownloadVisualize
BU of 8vil by Molmil
EgtB-IV from Crocosphaera subtropica, an ergothioneine-biosynthetic type IV sulfoxide synthase in complex with N,N-dimethyl-histidine
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, FE (III) ION, ...
Authors:Ireland, K.A, Davis, K.M.
Deposit date:2024-01-04
Release date:2024-08-07
Last modified:2024-09-11
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural insights into the convergent evolution of sulfoxide synthase EgtB-IV, an ergothioneine-biosynthetic homolog of ovothiol synthase OvoA.
Structure, 2024
8VIK
DownloadVisualize
BU of 8vik by Molmil
EgtB-IV from Crocosphaera subtropica, a type IV sulfoxide synthase involved in ergothioneine biosynthesis
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, FE (III) ION, ...
Authors:Ireland, K.A, Davis, K.M.
Deposit date:2024-01-04
Release date:2024-08-07
Last modified:2024-09-11
Method:X-RAY DIFFRACTION (1.961 Å)
Cite:Structural insights into the convergent evolution of sulfoxide synthase EgtB-IV, an ergothioneine-biosynthetic homolog of ovothiol synthase OvoA.
Structure, 2024
8VIJ
DownloadVisualize
BU of 8vij by Molmil
Crystal structure of Shewanella benthica Group 1 truncated hemoglobin Y34F C51S C71S variant (cyanomet)
Descriptor: CYANIDE ION, Group 1 truncated hemoglobin, PROTOPORPHYRIN IX CONTAINING FE
Authors:Lecomte, J.T.J, Schlessman, J.L, Martinez, J.E, Schultz, T.D, Siegler, M.A, DelCampo, M, Le Magueres, P.
Deposit date:2024-01-04
Release date:2024-04-03
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Crystal structure of Shewanella benthica Group 1 truncated hemoglobin Y34F C51S C71S variant in the cyanomet state
To be published
8VII
DownloadVisualize
BU of 8vii by Molmil
EgtB-IV from Crocosphaera subtropica, an ergothioneine-biosynthetic type IV sulfoxide synthase in complex with cysteine and hercynine
Descriptor: 1,2-ETHANEDIOL, CYSTEINE, MANGANESE (II) ION, ...
Authors:Ireland, K.A, Davis, K.M.
Deposit date:2024-01-04
Release date:2024-08-07
Last modified:2024-09-11
Method:X-RAY DIFFRACTION (1.621 Å)
Cite:Structural insights into the convergent evolution of sulfoxide synthase EgtB-IV, an ergothioneine-biosynthetic homolog of ovothiol synthase OvoA.
Structure, 2024
8VIH
DownloadVisualize
BU of 8vih by Molmil
EgtB-IV from Crocosphaera subtropica, an ergothioneine-biosynthetic type IV sulfoxide synthase in complex with hercynine
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, FE (III) ION, ...
Authors:Ireland, K.A, Davis, K.M.
Deposit date:2024-01-04
Release date:2024-08-07
Last modified:2024-09-11
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structural insights into the convergent evolution of sulfoxide synthase EgtB-IV, an ergothioneine-biosynthetic homolog of ovothiol synthase OvoA.
Structure, 2024
8VIG
DownloadVisualize
BU of 8vig by Molmil
EgtB-IV from Geminocystis sp. isolate SKYG4, an ergothioneine-biosynthetic type IV sulfoxide synthase in complex with hercynine
Descriptor: 1,2-ETHANEDIOL, FE (III) ION, N,N,N-trimethyl-histidine, ...
Authors:Ireland, K.A, Davis, K.M.
Deposit date:2024-01-04
Release date:2024-08-07
Last modified:2024-09-11
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural insights into the convergent evolution of sulfoxide synthase EgtB-IV, an ergothioneine-biosynthetic homolog of ovothiol synthase OvoA.
Structure, 2024
8VIF
DownloadVisualize
BU of 8vif by Molmil
SARS-CoV-2 spike omicron (BA.1) ectodomain trimer in complex with SC27 Fab, local refinement
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, SC27 Fab heavy chain, SC27 Fab light chain, ...
Authors:Byrne, P.O, McLellan, J.S.
Deposit date:2024-01-04
Release date:2024-07-24
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:SARS-CoV-2 spike omicron (BA.1) ectodomain trimer in complex with SC27 Fab, global refinement
To Be Published
8VIE
DownloadVisualize
BU of 8vie by Molmil
2-PPA bound human TMEM175
Descriptor: 2-phenylpyridin-4-amine, Endosomal/lysosomal potassium channel TMEM175
Authors:Oh, S, Hite, R.K.
Deposit date:2024-01-04
Release date:2024-08-14
Method:ELECTRON MICROSCOPY (3.52 Å)
Cite:Structure of human TMEM175 in an inhibitor-bound state
To Be Published
8VID
DownloadVisualize
BU of 8vid by Molmil
CW Flagellar Switch Complex with extra density - FliF, FliG, FliM, and FliN forming single subunit of the C-ring from Salmonella
Descriptor: Flagellar M-ring protein, Flagellar motor switch protein FliG, Flagellar motor switch protein FliM, ...
Authors:Singh, P.K, Iverson, T.M.
Deposit date:2024-01-03
Release date:2024-02-28
Last modified:2024-08-21
Method:ELECTRON MICROSCOPY (5.9 Å)
Cite:CryoEM structures reveal how the bacterial flagellum rotates and switches direction.
Nat Microbiol, 9, 2024
8VIC
DownloadVisualize
BU of 8vic by Molmil
AP-6 bound human TMEM175
Descriptor: (2P,2'P)-2,2'-(1,3-phenylene)di(pyridin-4-amine), Endosomal/lysosomal potassium channel TMEM175
Authors:Oh, S, Hite, R.K.
Deposit date:2024-01-03
Release date:2024-08-14
Method:ELECTRON MICROSCOPY (3.48 Å)
Cite:Structure of human TMEM175 in an inhibitor-bound state
To Be Published
8VIB
DownloadVisualize
BU of 8vib by Molmil
CW Flagellar Switch Complex - FliF, FliG, FliM, and FliN forming single subunit of the C-ring from Salmonella
Descriptor: Flagellar M-ring protein, Flagellar motor switch protein FliG, Flagellar motor switch protein FliM, ...
Authors:Singh, P.K, Iverson, T.M.
Deposit date:2024-01-03
Release date:2024-02-28
Last modified:2024-08-21
Method:ELECTRON MICROSCOPY (4.6 Å)
Cite:CryoEM structures reveal how the bacterial flagellum rotates and switches direction.
Nat Microbiol, 9, 2024
8VIA
DownloadVisualize
BU of 8via by Molmil
Protective effect of human non-neutralizing cross-reactive spike antibodies elicited by SARS-CoV-2 mRNA vaccination
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, PVI.V5-4 heavy chain, ...
Authors:Bajic, G.
Deposit date:2024-01-03
Release date:2024-10-23
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Protective effect and molecular mechanisms of human non-neutralizing cross-reactive spike antibodies elicited by SARS-CoV-2 mRNA vaccination.
Biorxiv, 2024
8VI8
DownloadVisualize
BU of 8vi8 by Molmil
Engineered glutamine binding protein and a cobaloxime ligand - no GLN bound
Descriptor: AZIDOBIS (DIMETHYLGLYOXIMATO) PYRIDINECOBALT, Amino acid ABC transporter substrate-binding protein, SODIUM ION, ...
Authors:Boggs, D.G, Fatima, S, Olshansky, L, Bridwell-Rabb, J.
Deposit date:2024-01-03
Release date:2024-09-04
Method:X-RAY DIFFRACTION (3.21 Å)
Cite:Conformation-Dependent Hydrogen-Bonding Interactions in a Switchable Artificial Metalloprotein.
Biochemistry, 63, 2024
8VI5
DownloadVisualize
BU of 8vi5 by Molmil
TehA from Haemophilus influenzae purified in OG
Descriptor: Tellurite resistance protein TehA homolog
Authors:Catalano, C, Senko, S, Tran, N.L, Lucier, K.W, Farwell, A.C, Silva, M.S, Dip, P.V, Poweleit, N, Scapin, G.
Deposit date:2024-01-03
Release date:2024-05-08
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:High-Resolution Cryo-Electron Microscopy Structure Determination of Haemophilus influenzae Tellurite-Resistance Protein A via 200 kV Transmission Electron Microscopy.
Int J Mol Sci, 25, 2024
8VI4
DownloadVisualize
BU of 8vi4 by Molmil
TehA from Haemophilus influenzae purified in LMNG
Descriptor: Tellurite resistance protein TehA homolog
Authors:Catalano, C, Senko, S, Tran, N.L, Lucier, K.W, Farwell, A.C, Silva, M.S, Dip, P.V, Poweleit, N, Scapin, G.
Deposit date:2024-01-03
Release date:2024-05-08
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:High-Resolution Cryo-Electron Microscopy Structure Determination of Haemophilus influenzae Tellurite-Resistance Protein A via 200 kV Transmission Electron Microscopy.
Int J Mol Sci, 25, 2024
8VI3
DownloadVisualize
BU of 8vi3 by Molmil
TehA from Haemophilus influenzae purified in GDN
Descriptor: Tellurite resistance protein TehA homolog
Authors:Catalano, C, Senko, S, Tran, N.L, Lucier, K.W, Farwell, A.C, Silva, M.S, Dip, P.V, Poweleit, N, Scapin, G.
Deposit date:2024-01-03
Release date:2024-05-08
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:High-Resolution Cryo-Electron Microscopy Structure Determination of Haemophilus influenzae Tellurite-Resistance Protein A via 200 kV Transmission Electron Microscopy.
Int J Mol Sci, 25, 2024
8VI2
DownloadVisualize
BU of 8vi2 by Molmil
TehA from Haemophilus influenzae purified in DDM
Descriptor: Tellurite resistance protein TehA homolog
Authors:Catalano, C, Senko, S, Tran, N.L, Lucier, K.W, Farwell, A.C, Silva, M.S, Dip, P.V, Poweleit, N, Scapin, G.
Deposit date:2024-01-03
Release date:2024-05-08
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:High-Resolution Cryo-Electron Microscopy Structure Determination of Haemophilus influenzae Tellurite-Resistance Protein A via 200 kV Transmission Electron Microscopy.
Int J Mol Sci, 25, 2024
8VHY
DownloadVisualize
BU of 8vhy by Molmil
Neutron Structure of Reduced Trp161Phe MnSOD
Descriptor: MANGANESE (II) ION, Superoxide dismutase [Mn], mitochondrial
Authors:Azadmanesh, J, Slobodnik, K, Struble, L.R, Lutz, W.E, Coates, L, Weiss, K.L, Myles, D.A.A, Kroll, T, Borgstahl, G.E.O.
Deposit date:2024-01-02
Release date:2024-07-31
Last modified:2024-10-16
Method:NEUTRON DIFFRACTION (2.3 Å)
Cite:Revealing the atomic and electronic mechanism of human manganese superoxide dismutase product inhibition.
Nat Commun, 15, 2024
8VHX
DownloadVisualize
BU of 8vhx by Molmil
Cryo-EM of neck of bacteriophage Chi
Descriptor: Neck 1, Neck 2, Portal, ...
Authors:Sonani, R.R, Esteves, N.C, Scharf, B.E, Egelman, E.H.
Deposit date:2024-01-02
Release date:2024-10-02
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Cryo-EM structure of flagellotropic bacteriophage Chi.
Structure, 32, 2024
8VHW
DownloadVisualize
BU of 8vhw by Molmil
Neutron Structure of Peroxide-Soaked Trp161Phe MnSOD
Descriptor: HYDROGEN PEROXIDE, MANGANESE (II) ION, Superoxide dismutase [Mn], ...
Authors:Azadmanesh, J, Slobodnik, K, Struble, L.R, Lutz, W.E, Coates, L, Weiss, K.L, Myles, D.A.A, Kroll, T, Borgstahl, G.E.O.
Deposit date:2024-01-02
Release date:2024-07-31
Last modified:2024-10-16
Method:NEUTRON DIFFRACTION (2.3 Å)
Cite:Revealing the atomic and electronic mechanism of human manganese superoxide dismutase product inhibition.
Nat Commun, 15, 2024
8VHU
DownloadVisualize
BU of 8vhu by Molmil
Crystal structure of dATP bound E. coli class Ia ribonucleotide reductase alpha construct fused with the C-terminal tail of E. coli class Ia beta subunit
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, CHLORIDE ION, Fusion protein of Ribonucleoside-diphosphate reductase 1 subunits alpha and beta, ...
Authors:Funk, M.A, Zimanyi, C.M, Drennan, C.L.
Deposit date:2024-01-02
Release date:2024-09-04
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:How ATP and dATP Act as Molecular Switches to Regulate Enzymatic Activity in the Prototypical Bacterial Class Ia Ribonucleotide Reductase.
Biochemistry, 63, 2024
8VHR
DownloadVisualize
BU of 8vhr by Molmil
Crystal structure of E. coli class Ia ribonucleotide reductase alpha subunit W28A variant bound to dATP and GTP
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Funk, M.A, Zimanyi, C.M, Drennan, C.L.
Deposit date:2024-01-02
Release date:2024-09-04
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (3.55 Å)
Cite:How ATP and dATP Act as Molecular Switches to Regulate Enzymatic Activity in the Prototypical Bacterial Class Ia Ribonucleotide Reductase.
Biochemistry, 63, 2024

226707

PDB entries from 2024-10-30

PDB statisticsPDBj update infoContact PDBjnumon