1OVF
| NMR Structure of ActD/5'-CCGTTTTGTGG-3' Complex | Descriptor: | (5'-D(*CP*CP*GP*TP*TP*TP*TP*GP*TP*GP*G)-3'), ACTINOMYCIN D | Authors: | Chin, K.-H, Chou, S.-H, Chen, F.-M. | Deposit date: | 2003-03-26 | Release date: | 2003-05-27 | Last modified: | 2024-07-10 | Method: | SOLUTION NMR | Cite: | Solution Structure of the Actd-5'-Ccgtt(3)Gtgg-3' Complex: Drug Interaction with Tandem G.T Mismatches and Hairpin Loop Backbone. Nucleic Acids Res., 31, 2003
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1FKZ
| NMR STUDY OF B-DNA CONTAINING A MISMATCHED BASE PAIR IN THE 29-39 K-RAS GENE SEQUENCE: CC CT C+C C+T, 2 STRUCTURES | Descriptor: | DNA (5'-D(*GP*AP*GP*CP*TP*CP*GP*TP*GP*GP*C)-3'), DNA (5'-D(*GP*CP*CP*AP*CP*CP*AP*GP*CP*TP*C)-3') | Authors: | Boulard, Y, Cognet, J.A.H, Fazakerley, G.V. | Deposit date: | 1996-10-09 | Release date: | 1997-03-12 | Last modified: | 2024-05-22 | Method: | SOLUTION NMR | Cite: | Solution structure as a function of pH of two central mismatches, C . T and C . C, in the 29 to 39 K-ras gene sequence, by nuclear magnetic resonance and molecular dynamics. J.Mol.Biol., 268, 1997
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1P4Z
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1OSR
| Structural study of dna duplex containaing a n-(2-deoxy-beta-erytho-pentofuranosyl) formamide frameshift by nmr and restrained molecular dynamics | Descriptor: | 5'-D(*AP*GP*GP*AP*CP*CP*AP*CP*G)-3', 5'-D(*CP*GP*TP*GP*GP*(2DF)P*TP*CP*CP*T)-3' | Authors: | Maufrais, C, Fazakerley, G.V, Cadet, J, Boulard, Y. | Deposit date: | 2003-03-20 | Release date: | 2003-10-14 | Last modified: | 2024-05-22 | Method: | SOLUTION NMR | Cite: | Structural study of DNA duplex containing an N-(2-deoxy-beta-D-erythro-pentofuranosyl) formamide
frameshift by NMR and restrained molecular dynamics. Nucleic Acids Res., 31, 2003
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1S37
| Accomodation of Mispair-Aligned N3T-Ethyl-N3T DNA Interstrand Crosslink | Descriptor: | DNA (5'-D(*CP*GP*AP*AP*AP*(TTM)P*TP*TP*TP*CP*G)-3'), DNA (5'-D(*CP*GP*AP*AP*AP*TP*TP*TP*TP*CP*G)-3') | Authors: | da Silva, M.W, Noronha, A.M, Noll, D.M, Miller, P.S, Colvin, O.M, Gamcsik, M.P. | Deposit date: | 2004-01-12 | Release date: | 2005-01-25 | Last modified: | 2024-05-01 | Method: | SOLUTION NMR | Cite: | Accommodation of mispair aligned N3T-ethyl-N3T DNA interstrand cross link. Biochemistry, 43, 2004
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298D
| TARGETING THE MINOR GROOVE OF DNA: CRYSTAL STRUCTURES OF TWO COMPLEXES BETWEEN FURAN DERIVATIVES OF BERENIL AND THE DNA DODECAMER D(CGCGAATTCGCG)2 | Descriptor: | 2,5-BIS{[4-(N-ISOPROPYL)DIAMINOMETHYL]PHENYL}FURAN, DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3') | Authors: | Trent, J.O, Clark, G.R, Kumar, A, Wilson, W.D, Boykin, D.W, Hall, J.E, Tidwell, R.R, Blagburn, B.L, Neidle, S. | Deposit date: | 1996-10-10 | Release date: | 1996-12-17 | Last modified: | 2024-04-03 | Method: | X-RAY DIFFRACTION (2.2 Å) | Cite: | Targeting the minor groove of DNA: crystal structures of two complexes between furan derivatives of berenil and the DNA dodecamer d(CGCGAATTCGCG)2. J.Med.Chem., 39, 1996
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289D
| TARGETING THE MINOR GROOVE OF DNA: CRYSTAL STRUCTURES OF TWO COMPLEXES BETWEEN FURAN DERIVATIVES OF BERENIL AND THE DNA DODECAMER D(CGCGAATTCGCG)2 | Descriptor: | 2,5-BIS{[4-(N-CYCLOPROPYLDIAMINOMETHYL)PHENYL]}FURAN, DNA (5'-R(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3') | Authors: | Trent, J.O, Clark, G.R, Kumar, A, Wilson, W.D, Boykin, D.W, Hall, J.E, Tidwell, R.R, Blagburn, B.L, Neidle, S. | Deposit date: | 1996-10-10 | Release date: | 1996-12-17 | Last modified: | 2024-04-03 | Method: | X-RAY DIFFRACTION (2.2 Å) | Cite: | Targeting the minor groove of DNA: crystal structures of two complexes between furan derivatives of berenil and the DNA dodecamer d(CGCGAATTCGCG)2. J.Med.Chem., 39, 1996
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1DNS
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7U8B
| Product of 14mer primer with activated asymmetric GA dimer diastereomer 1 | Descriptor: | 5'-O-[(S)-(2-amino-1H-imidazol-1-yl)(hydroxy)phosphoryl]adenosine, RNA (5'-R(*(TLN)P*(LCC)P*(LCC)P*(LCG)P*AP*CP*UP*UP*AP*AP*GP*UP*CP*GP*(G46))-3'), SULFATE ION | Authors: | Fang, Z, Szostak, J.W. | Deposit date: | 2022-03-08 | Release date: | 2023-03-15 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (1.73 Å) | Cite: | Understanding the metal ion function in the RNA non-enzymatic extesion with phosphorothioates To Be Published
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3I2O
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3I49
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3I3M
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1JS7
| Solution Structure of dAAUAA DNA Bulge | Descriptor: | 5'-D(*CP*GP*TP*AP*GP*CP*CP*GP*AP*TP*GP*C)-3', 5'-D(*GP*CP*AP*TP*CP*GP*AP*AP*UP*AP*AP*GP*CP*TP*AP*CP*G)-3' | Authors: | Gollmick, F.A, Lorenz, M, Dornberger, U, von Langen, J, Diekmann, S, Fritzsche, H. | Deposit date: | 2001-08-16 | Release date: | 2002-06-19 | Last modified: | 2024-05-22 | Method: | SOLUTION NMR | Cite: | Solution structure of dAATAA and dAAUAA DNA bulges. Nucleic Acids Res., 30, 2002
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1JRV
| SOLUTION STRUCTURE OF DAATAA DNA BULGE | Descriptor: | 5'-D(*CP*GP*TP*AP*GP*CP*CP*GP*AP*TP*GP*C)-3', 5'-D(*GP*CP*AP*TP*CP*GP*AP*AP*TP*AP*AP*GP*CP*TP*AP*CP*G)-3' | Authors: | Gollmick, F.A, Lorenz, M, Dornberger, U, von Langen, J, Diekmann, S, Fritzsche, H. | Deposit date: | 2001-08-15 | Release date: | 2002-06-19 | Last modified: | 2024-05-22 | Method: | SOLUTION NMR | Cite: | Solution structure of dAATAA and dAAUAA DNA bulges. Nucleic Acids Res., 30, 2002
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1JRW
| Solution Structure of dAATAA DNA Bulge | Descriptor: | 5'-D(*CP*GP*TP*AP*GP*CP*CP*GP*AP*TP*GP*C)-3', 5'-D(*GP*CP*AP*TP*CP*GP*AP*AP*TP*AP*AP*GP*CP*TP*AP*CP*G)-3' | Authors: | Gollmick, F.A, Lorenz, M, Dornberger, U, von Langen, J, Diekmann, S, Fritzsche, H. | Deposit date: | 2001-08-15 | Release date: | 2002-08-28 | Last modified: | 2024-05-22 | Method: | SOLUTION NMR | Cite: | Solution structure of dAATAA and dAAUAA DNA bulges. Nucleic Acids Res., 30, 2002
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7Z1L
| Structure of yeast RNA Polymerase III Pre-Termination Complex (PTC) | Descriptor: | (3R,5S,7R,8R,9S,10S,12S,13R,14S,17R)-10,13-dimethyl-17-[(2R)-pentan-2-yl]-2,3,4,5,6,7,8,9,11,12,14,15,16,17-tetradecahydro-1H-cyclopenta[a]phenanthrene-3,7,12-triol, DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerase III subunit RPC10, ... | Authors: | Girbig, M, Mueller, C.W. | Deposit date: | 2022-02-24 | Release date: | 2022-08-31 | Last modified: | 2024-07-17 | Method: | ELECTRON MICROSCOPY (2.8 Å) | Cite: | Architecture of the yeast Pol III pre-termination complex and pausing mechanism on poly(dT) termination signals. Cell Rep, 40, 2022
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7Z1N
| Structure of yeast RNA Polymerase III Delta C53-C37-C11 | Descriptor: | CHAPSO, DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerase III subunit RPC2, ... | Authors: | Girbig, M, Mueller, C.W. | Deposit date: | 2022-02-24 | Release date: | 2022-08-31 | Last modified: | 2024-07-17 | Method: | ELECTRON MICROSCOPY (3.9 Å) | Cite: | Architecture of the yeast Pol III pre-termination complex and pausing mechanism on poly(dT) termination signals. Cell Rep, 40, 2022
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7Z1O
| Structure of yeast RNA Polymerase III PTC + NTPs | Descriptor: | CHAPSO, DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerase III subunit RPC10, ... | Authors: | Girbig, M, Mueller, C.W. | Deposit date: | 2022-02-24 | Release date: | 2022-08-31 | Last modified: | 2024-07-17 | Method: | ELECTRON MICROSCOPY (2.7 Å) | Cite: | Architecture of the yeast Pol III pre-termination complex and pausing mechanism on poly(dT) termination signals. Cell Rep, 40, 2022
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7Z1M
| Structure of yeast RNA Polymerase III Elongation Complex (EC) | Descriptor: | (3R,5S,7R,8R,9S,10S,12S,13R,14S,17R)-10,13-dimethyl-17-[(2R)-pentan-2-yl]-2,3,4,5,6,7,8,9,11,12,14,15,16,17-tetradecahydro-1H-cyclopenta[a]phenanthrene-3,7,12-triol, DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerase III subunit RPC10, ... | Authors: | Girbig, M, Mueller, C.W. | Deposit date: | 2022-02-24 | Release date: | 2022-08-31 | Last modified: | 2022-09-21 | Method: | ELECTRON MICROSCOPY (3.4 Å) | Cite: | Architecture of the yeast Pol III pre-termination complex and pausing mechanism on poly(dT) termination signals. Cell Rep, 40, 2022
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2D7D
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1JS5
| Solution Structure of dAAUAA DNA Bulge | Descriptor: | 5'-D(*CP*GP*TP*AP*GP*CP*CP*GP*AP*TP*GP*C)-3', 5'-D(*GP*CP*AP*TP*CP*GP*AP*AP*UP*AP*AP*GP*CP*TP*AP*CP*G)-3' | Authors: | Gollmick, F.A, Lorenz, M, Dornberger, U, von Langen, J, Diekmann, S, Fritzsche, H. | Deposit date: | 2001-08-16 | Release date: | 2002-08-28 | Last modified: | 2024-05-22 | Method: | SOLUTION NMR | Cite: | Solution structure of dAATAA and dAAUAA DNA bulges. Nucleic Acids Res., 30, 2002
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2VHI
| Crystal structure of a pyrimidine degrading enzyme from Drosophila melanogaster | Descriptor: | CG3027-PA | Authors: | Lundgren, S, Lohkamp, B, Andersen, B, Piskur, J, Dobritzsch, D. | Deposit date: | 2007-11-21 | Release date: | 2008-03-25 | Last modified: | 2024-05-08 | Method: | X-RAY DIFFRACTION (3.3 Å) | Cite: | The Crystal Structure of Beta-Alanine Synthase from Drosophila Melanogaster Reveals a Homooctameric Helical Turn-Like Assembly. J.Mol.Biol., 377, 2008
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4TRA
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1TEZ
| COMPLEX BETWEEN DNA AND THE DNA PHOTOLYASE FROM ANACYSTIS NIDULANS | Descriptor: | 5'-D(*AP*TP*CP*GP*GP*CP*T*(TCP)P*CP*GP*C)-3', 5'-D(*TP*CP*GP*C)-3', 5'-D(P*CP*GP*AP*AP*GP*CP*CP*GP*A)-3', ... | Authors: | Essen, L.-O, Carell, T, Mees, A, Klar, T. | Deposit date: | 2004-05-26 | Release date: | 2004-12-14 | Last modified: | 2024-07-03 | Method: | X-RAY DIFFRACTION (1.8 Å) | Cite: | Crystal structure of a photolyase bound to a CPD-like DNA lesion after in situ repair Science, 306, 2004
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1NYD
| Solution structure of DNA quadruplex GCGGTGGAT | Descriptor: | 5'-D(*GP*CP*GP*GP*TP*GP*GP*AP*T)-3' | Authors: | Webba da Silva, M. | Deposit date: | 2003-02-12 | Release date: | 2004-02-24 | Last modified: | 2024-05-22 | Method: | SOLUTION NMR | Cite: | Association of DNA quadruplexes through G:C:G:C tetrads. Solution structure of d(GCGGTGGAT). Biochemistry, 42, 2003
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