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3A6H
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BU of 3a6h by Molmil
W154A mutant creatininase
Descriptor: CHLORIDE ION, Creatinine amidohydrolase, MANGANESE (II) ION, ...
Authors:Nakajima, Y, Yamashita, K, Ito, K, Yoshimoto, T.
Deposit date:2009-08-31
Release date:2010-02-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Substitution of Glu122 by glutamine revealed the function of the second water molecule as a proton donor in the binuclear metal enzyme creatininase
J.Mol.Biol., 396, 2010
4GY1
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BU of 4gy1 by Molmil
Round 18 Arylesterase Variant of Phosphotriesterase with Bound Cacodylate
Descriptor: CACODYLATE ION, ZINC ION, arylesterase variant of phosphotriesterase
Authors:Jackson, C.J, Tokuriki, N, Tawfik, D.S.
Deposit date:2012-09-05
Release date:2013-08-21
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Diminishing returns and tradeoffs constrain the laboratory optimization of an enzyme
Nat Commun, 3, 2012
4GYJ
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BU of 4gyj by Molmil
Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-N-acetyl-alpha-muramic acid, Uncharacterized lipoprotein ybbD
Authors:Bacik, J.P, Mark, B.L.
Deposit date:2012-09-05
Release date:2012-12-19
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Active Site Plasticity within the Glycoside Hydrolase NagZ Underlies a Dynamic Mechanism of Substrate Distortion.
Chem.Biol., 19, 2012
4EIR
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BU of 4eir by Molmil
Structural basis for substrate targeting and catalysis by fungal polysaccharide monooxygenases (PMO-2)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, COPPER (II) ION, GLYCEROL, ...
Authors:Li, X, Beeson, W.T, Phillips, C.M, Marletta, M.A, Cate, J.H.
Deposit date:2012-04-05
Release date:2012-05-23
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Structural basis for substrate targeting and catalysis by fungal polysaccharide monooxygenases.
Structure, 20, 2012
3APG
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BU of 3apg by Molmil
Crystal structure of hyperthermophilic beta-glucosidase from pyrococcus furiosus
Descriptor: Beta-glucosidase, GLYCEROL
Authors:Kado, Y, Inoue, T, Ishikawa, K.
Deposit date:2010-10-15
Release date:2011-10-19
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Crystal structure of hyperthermophilic beta-glucosidase from pyrococcus furiosus
TO BE PUBLISHED
1NAH
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BU of 1nah by Molmil
UDP-GALACTOSE 4-EPIMERASE FROM ESCHERICHIA COLI, REDUCED
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Thoden, J.B, Frey, P.A, Holden, H.M.
Deposit date:1995-11-22
Release date:1996-12-23
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structures of the oxidized and reduced forms of UDP-galactose 4-epimerase isolated from Escherichia coli.
Biochemistry, 35, 1996
1ZEJ
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BU of 1zej by Molmil
Crystal structure of the 3-hydroxyacyl-coa dehydrogenase (hbd-9, af2017) from archaeoglobus fulgidus dsm 4304 at 2.00 A resolution
Descriptor: 3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL, 3-hydroxyacyl-CoA dehydrogenase, CHLORIDE ION
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2005-04-18
Release date:2005-05-03
Last modified:2023-01-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of 3-hydroxyacyl-CoA dehydrogenase (HBD-9) (np_070841.1) from Archaeoglobus fulgidus at 2.00 A resolution
To be published
4EMI
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BU of 4emi by Molmil
Toluene dioxygenase reductase in reduced state in complex with NAD+
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, TodA
Authors:Lin, T.Y, Werther, T, Jeoung, J.H, Dobbek, H.
Deposit date:2012-04-12
Release date:2012-09-26
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.806 Å)
Cite:Suppression of Electron Transfer to Dioxygen by Charge Transfer and Electron Transfer Complexes in the FAD-dependent Reductase Component of Toluene Dioxygenase.
J.Biol.Chem., 287, 2012
2EF5
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BU of 2ef5 by Molmil
Crystal structure of the arginase from thermus thermophilus
Descriptor: Arginase, GUANIDINE, LYSINE, ...
Authors:Kumarevel, T.S, Karthe, P, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-02-20
Release date:2007-04-14
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the arginase from thermus thermophilus
To be Published
1NI4
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BU of 1ni4 by Molmil
HUMAN PYRUVATE DEHYDROGENASE
Descriptor: MAGNESIUM ION, POTASSIUM ION, Pyruvate dehydrogenase E1 component: Alpha subunit, ...
Authors:Ciszak, E, Korotchkina, L.G, Dominiak, P.M, Sidhu, S, Patel, M.S.
Deposit date:2002-12-20
Release date:2003-06-17
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural Basis for Flip-Flop Action of Thiamin Pyrophosphate-Dependent Enzymes Revealed by Human Pyruvate Dehydrogenase
J.Biol.Chem., 278, 2003
4EOD
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BU of 4eod by Molmil
Crystal structure of H74E synechocystis sp. pcya sp. PCYA
Descriptor: BILIVERDINE IX ALPHA, CHLORIDE ION, Phycocyanobilin:ferredoxin oxidoreductase
Authors:Kabasakal, B.V, Gae, D.D.
Deposit date:2012-04-13
Release date:2012-08-29
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Crystal structure of H74E synechocystis sp. pcya sp. PCYA
To be Published
3ZQD
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BU of 3zqd by Molmil
B. subtilis L,D-transpeptidase
Descriptor: L, D-TRANSPEPTIDASE YKUD
Authors:Lecoq, L, Simorre, J.-P, Bougault, C, Arthur, M, Hugonnet, J.-E, Veckerle, C, Pessey, O.
Deposit date:2011-06-09
Release date:2012-05-23
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Dynamics Induced by Beta-Lactam Antibiotics in the Active Site of Bacillus subtilis L,D-Transpeptidase.
Structure, 20, 2012
1N03
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BU of 1n03 by Molmil
Model for Active RecA Filament
Descriptor: ADENOSINE-5'-DIPHOSPHATE, RecA protein
Authors:VanLoock, M.S, Yu, X, Yang, S, Lai, A.L, Low, C, Campbell, M.J, Egelman, E.H.
Deposit date:2002-10-10
Release date:2003-02-25
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (20 Å)
Cite:ATP-Mediated Conformational Changes in the RecA Filament
Structure, 11, 2003
4J0L
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BU of 4j0l by Molmil
Crystal Structure of a Family GH19 Chitinase (W72A/E67Q mutant) from rye seeds in complex with two (GlcNAc)4 molecules
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Basic endochitinase C, ...
Authors:Umemoto, N, Numata, T, Ohnuma, T, Fukamizo, T.
Deposit date:2013-01-31
Release date:2013-10-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Complete subsite mapping of a "loopful" GH19 chitinase from rye seeds based on its crystal structure
Febs Lett., 587, 2013
1ZEM
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BU of 1zem by Molmil
Crystal Structure of NAD+-Bound Xylitol Dehydrogenase
Descriptor: MAGNESIUM ION, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, xylitol dehydrogenase
Authors:Ehrensberger, A.H, Elling, R.A, Wilson, D.K.
Deposit date:2005-04-19
Release date:2006-03-28
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure-guided engineering of xylitol dehydrogenase cosubstrate specificity.
Structure, 14, 2006
2EI2
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BU of 2ei2 by Molmil
Crystal Structure Analysis of the 1,2-dihydroxynaphthalene dioxygenase from Pseudomonas sp. stain C18
Descriptor: 1,2-dihydroxynaphthalene dioxygenase, FE (II) ION, GLYCEROL, ...
Authors:Neau, D.B, Kelker, M.S, Colbert, C.L, Bolin, J.T.
Deposit date:2007-03-10
Release date:2008-02-19
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Structural explanation for success and failure in the enzymatic ring-cleavage of 3,4 dihydroxybiphenyl and related PCB metabolites
To be Published
1N1E
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BU of 1n1e by Molmil
Crystal structure of Leishmania mexicana Glycerol-3-phosphate dehydrogenase complexed with DHAP and NAD
Descriptor: ADENOSINE 5'-(TRIHYDROGEN DIPHOSPHATE) P'-5'-ESTER WITH 3-(AMINOCARBONYL)-4-(1-HYDROXYL-2-OXO-3-PHOSPHONOOXY-PROPYL)-1-BETA-D-RIBOFURANOSYLPYRIDINIUM INNER SALT, glycerol-3-phosphate dehydrogenase
Authors:Choe, J, Hol, W.G.J.
Deposit date:2002-10-17
Release date:2003-05-27
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Leishmania mexicana Glycerol-3-phosphate Dehydrogenase Showed Conformational Changes Upon Binding a Bi-substrate Adduct
J.Mol.Biol., 320, 2003
1ZHS
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BU of 1zhs by Molmil
Crystal structure of MVL bound to Man3GlcNAc2
Descriptor: 1,2-ETHANEDIOL, PHOSPHATE ION, alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Williams, D.C, Lee, J.Y, Cai, M, Bewley, C.A, Clore, G.M.
Deposit date:2005-04-26
Release date:2005-06-07
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structures of the HIV-1 Inhibitory Cyanobacterial Protein MVL Free and Bound to Man3GlcNAc2: STRUCTURAL BASIS FOR SPECIFICITY AND HIGH-AFFINITY BINDING TO THE CORE PENTASACCHARIDE FROM N-LINKED OLIGOMANNOSIDE.
J.Biol.Chem., 280, 2005
1NFP
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BU of 1nfp by Molmil
STRUCTURAL REFINEMENT OF THE NON-FLUORESCENT FLAVOPROTEIN FROM PHOTOBACTERIUM LEIOGNATHI AT 1.60 ANGSTROMS RESOLUTION
Descriptor: FLAVIN MONONUCLEOTIDE, LUXF GENE PRODUCT, MYRISTIC ACID, ...
Authors:Moore, S.A, Njames, M.N.G.
Deposit date:1995-02-27
Release date:1995-06-03
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural refinement of the non-fluorescent flavoprotein from Photobacterium leiognathi at 1.60 A resolution.
J.Mol.Biol., 249, 1995
3ZF6
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BU of 3zf6 by Molmil
Phage dUTPases control transfer of virulence genes by a proto-oncogenic G protein-like mechanism. (Staphylococcus bacteriophage 80alpha dUTPase D81A D110C S168C mutant with dUpNHpp).
Descriptor: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, DUTPASE, NICKEL (II) ION
Authors:Tormo-Mas, M.A, Donderis, J, Garcia-Caballer, M, Alt, A, Mir-Sanchis, I, Marina, A, Penades, J.R.
Deposit date:2012-12-10
Release date:2013-01-30
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Phage Dutpases Control Transfer of Virulence Genes by a Proto-Oncogenic G Protein-Like Mechanism.
Mol.Cell, 49, 2013
4J1W
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BU of 4j1w by Molmil
Crystal Structure of Fe(II)-HppE with alternative substrate (R)-1-HPP
Descriptor: Epoxidase, FE (II) ION, GLYCEROL, ...
Authors:Drennan, C.L, Dey, M.
Deposit date:2013-02-03
Release date:2013-04-03
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.72 Å)
Cite:Mechanistic studies of an unprecedented enzyme-catalysed 1,2-phosphono-migration reaction.
Nature, 496, 2013
1ZJZ
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BU of 1zjz by Molmil
Structure of R-specific alcohol dehydrogenase (mutant G37D) from Lactobacillus brevis in complex with phenylethanol and NAD
Descriptor: (1R)-1-PHENYLETHANOL, MAGNESIUM ION, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Schlieben, N.H, Niefind, K, Muller, J, Riebel, B, Hummel, W, Schomburg, D.
Deposit date:2005-05-02
Release date:2005-06-21
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Atomic Resolution Structures of R-specific Alcohol Dehydrogenase from Lactobacillus brevis Provide the Structural Bases of its Substrate and Cosubstrate Specificity
J.Mol.Biol., 349, 2005
3ZF1
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BU of 3zf1 by Molmil
Phage dUTPases control transfer of virulence genes by a proto- oncogenic G protein-like mechanism. (Staphylococcus bacteriophage 80alpha dUTPase D81N mutant with dUpNHpp).
Descriptor: 2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE, DUTPASE, NICKEL (II) ION
Authors:Tormo-Mas, M.A, Donderis, J, Garcia-Caballer, M, Alt, A, Mir-Sanchis, I, Marina, A, Penades, J.R.
Deposit date:2012-12-10
Release date:2013-01-30
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3 Å)
Cite:Phage Dutpases Control Transfer of Virulence Genes by a Proto-Oncogenic G Protein-Like Mechanism.
Mol.Cell, 49, 2013
4EP6
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BU of 4ep6 by Molmil
Crystal structure of the XplA heme domain in complex with imidazole and PEG
Descriptor: Cytochrome P450-like protein XplA, IMIDAZOLE, PENTAETHYLENE GLYCOL, ...
Authors:Bui, S.H, McLean, K.J, Cheesman, M.R, Bradley, J.M, Rigby, S.E.J, Leys, D, Munro, A.W.
Deposit date:2012-04-17
Release date:2012-05-09
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Unusual Spectroscopic and Ligand Binding Properties of the Cytochrome P450-Flavodoxin Fusion Enzyme XplA.
J.Biol.Chem., 287, 2012
4IRN
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BU of 4irn by Molmil
Crystal Structure of the Prolyl Acyl Carrier Protein Oxidase AnaB
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Prolyl-ACP dehydrogenase
Authors:Moncoq, K, Mann, S, Regad, L, Mejean, A, Ploux, O.
Deposit date:2013-01-15
Release date:2013-11-27
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of the prolyl-acyl carrier protein oxidase involved in the biosynthesis of the cyanotoxin anatoxin-a.
Acta Crystallogr.,Sect.D, 69, 2013

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