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8HH9
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BU of 8hh9 by Molmil
F1 domain of FoF1-ATPase from Bacillus PS3, 90 degrees, low ATP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase gamma chain, ...
Authors:Nakano, A, Kishikawa, J, Mitsuoka, K, Yokoyama, K.
Deposit date:2022-11-16
Release date:2023-07-19
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Rotation mechanism of ATP synthases driven by ATP hydrolysis
To Be Published
6VOM
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BU of 6vom by Molmil
Chloroplast ATP synthase (R2, CF1)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase delta chain, ...
Authors:Yang, J.-H, Williams, D, Kandiah, E, Fromme, P, Chiu, P.-L.
Deposit date:2020-01-30
Release date:2020-09-09
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structural basis of redox modulation on chloroplast ATP synthase.
Commun Biol, 3, 2020
7VAQ
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BU of 7vaq by Molmil
V1EG of V/A-ATPase from Thermus thermophilus, high ATP, state3-2
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Kishikawa, J, Nakanishi, A, Nakano, A, Saeki, S, Furuta, A, Kato, T, Mitsuoka, K, Yokoyama, K.
Deposit date:2021-08-30
Release date:2022-07-13
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structural snapshots of V/A-ATPase reveal the rotary catalytic mechanism of rotary ATPases.
Nat Commun, 13, 2022
7VB0
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BU of 7vb0 by Molmil
V1EG domain of V/A-ATPase from Thermus thermophilus at saturated ATP-gamma-S condition, state3
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, ...
Authors:Kishikawa, J, Nakanishi, A, Nakano, A, Saeki, S, Furuta, A, Kato, T, Mitsuoka, K, Yokoyama, K.
Deposit date:2021-08-30
Release date:2022-07-13
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structural snapshots of V/A-ATPase reveal the rotary catalytic mechanism of rotary ATPases.
Nat Commun, 13, 2022
6Q45
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BU of 6q45 by Molmil
F1-ATPase from Fusobacterium nucleatum
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase epsilon chain, ...
Authors:Petri, J, Nakatani, Y, Montgomery, M.G, Ferguson, S.A, Aragao, D, Leslie, A.G.W, Heikal, A, Walker, J.E, Cook, G.M.
Deposit date:2018-12-05
Release date:2019-07-10
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Structure of F1-ATPase from the obligate anaerobe Fusobacterium nucleatum.
Open Biology, 9, 2019
6CP6
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BU of 6cp6 by Molmil
Monomer yeast ATP synthase (F1Fo) reconstituted in nanodisc.
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase protein 8, ...
Authors:Srivastava, A.P, Luo, M, Symersky, J, Liao, M.F, Mueller, D.M.
Deposit date:2018-03-13
Release date:2018-04-11
Last modified:2020-10-14
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:High-resolution cryo-EM analysis of the yeast ATP synthase in a lipid membrane.
Science, 360, 2018
6WM4
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BU of 6wm4 by Molmil
Human V-ATPase in state 3 with SidK and ADP
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ADENOSINE-5'-DIPHOSPHATE, Renin receptor, ...
Authors:Wang, L, Wu, H, Fu, T.M.
Deposit date:2020-04-20
Release date:2020-11-11
Last modified:2020-11-18
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structures of a Complete Human V-ATPase Reveal Mechanisms of Its Assembly.
Mol.Cell, 80, 2020
7L1S
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BU of 7l1s by Molmil
PS3 F1-ATPase Pi-bound Dwell
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, ATP synthase gamma chain, ATP synthase subunit alpha, ...
Authors:Sobti, M, Ueno, H, Noji, H, Stewart, A.G.
Deposit date:2020-12-15
Release date:2021-07-21
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:The six steps of the complete F 1 -ATPase rotary catalytic cycle.
Nat Commun, 12, 2021
7KHR
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BU of 7khr by Molmil
Cryo-EM structure of bafilomycin A1-bound intact V-ATPase from bovine brain
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, (5R)-2,4-dideoxy-1-C-{(2S,3R,4S)-3-hydroxy-4-[(2R,3S,4E,6E,9R,10S,11R,12E,14Z)-10-hydroxy-3,15-dimethoxy-7,9,11,13-tetramethyl-16-oxo-1-oxacyclohexadeca-4,6,12,14-tetraen-2-yl]pentan-2-yl}-4-methyl-5-propan-2-yl-alpha-D-threo-pentopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Wang, R, Li, X.
Deposit date:2020-10-21
Release date:2021-03-17
Last modified:2021-09-29
Method:ELECTRON MICROSCOPY (3.62 Å)
Cite:Molecular basis of V-ATPase inhibition by bafilomycin A1.
Nat Commun, 12, 2021
7NKL
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BU of 7nkl by Molmil
Mycobacterium smegmatis ATP synthase b-delta state 2
Descriptor: ATP synthase subunit alpha, ATP synthase subunit b, ATP synthase subunit b-delta, ...
Authors:Montgomery, M.G, Petri, J, Spikes, T.E, Walker, J.E.
Deposit date:2021-02-18
Release date:2021-11-03
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (3.67 Å)
Cite:Structure of the ATP synthase from Mycobacterium smegmatis provides targets for treating tuberculosis.
Proc.Natl.Acad.Sci.USA, 118, 2021
6RDK
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BU of 6rdk by Molmil
Cryo-EM structure of Polytomella F-ATP synthase, Rotary substate 1B, composite map
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ASA-10: Polytomella F-ATP synthase associated subunit 10, ...
Authors:Murphy, B.J, Klusch, N, Yildiz, O, Kuhlbrandt, W.
Deposit date:2019-04-12
Release date:2019-07-03
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Rotary substates of mitochondrial ATP synthase reveal the basis of flexible F 1 -F o coupling.
Science, 364, 2019
8DBV
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BU of 8dbv by Molmil
E. coli ATP synthase imaged in 10mM MgATP State3 "down
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase epsilon chain, ...
Authors:Sobti, M, Stewart, A.G.
Deposit date:2022-06-14
Release date:2023-01-25
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Changes within the central stalk of E. coli F 1 F o ATP synthase observed after addition of ATP.
Commun Biol, 6, 2023
8APD
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BU of 8apd by Molmil
rotational state 1d of the Trypanosoma brucei mitochondrial ATP synthase dimer
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, 2-{[(4-O-alpha-D-glucopyranosyl-alpha-D-glucopyranosyl)oxy]methyl}-4-{[(3beta,9beta,14beta,17beta,25R)-spirost-5-en-3-yl]oxy}butyl 4-O-alpha-D-glucopyranosyl-alpha-D-glucopyranoside, ...
Authors:Muehleip, A, Gahura, O, Zikova, A, Amunts, A.
Deposit date:2022-08-09
Release date:2022-10-26
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:An ancestral interaction module promotes oligomerization in divergent mitochondrial ATP synthases.
Nat Commun, 13, 2022
8APE
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BU of 8ape by Molmil
rotational state 1e of the Trypanosoma brucei mitochondrial ATP synthase dimer
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, 2-{[(4-O-alpha-D-glucopyranosyl-alpha-D-glucopyranosyl)oxy]methyl}-4-{[(3beta,9beta,14beta,17beta,25R)-spirost-5-en-3-yl]oxy}butyl 4-O-alpha-D-glucopyranosyl-alpha-D-glucopyranoside, ...
Authors:Muehleip, A, Gahura, O, Zikova, A, Amunts, A.
Deposit date:2022-08-09
Release date:2022-10-26
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:An ancestral interaction module promotes oligomerization in divergent mitochondrial ATP synthases.
Nat Commun, 13, 2022
8APA
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BU of 8apa by Molmil
rotational state 1a of the Trypanosoma brucei mitochondrial ATP synthase dimer
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, 2-{[(4-O-alpha-D-glucopyranosyl-alpha-D-glucopyranosyl)oxy]methyl}-4-{[(3beta,9beta,14beta,17beta,25R)-spirost-5-en-3-yl]oxy}butyl 4-O-alpha-D-glucopyranosyl-alpha-D-glucopyranoside, ...
Authors:Muehleip, A, Gahura, O, Zikova, A, Amunts, A.
Deposit date:2022-08-09
Release date:2022-10-26
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:An ancestral interaction module promotes oligomerization in divergent mitochondrial ATP synthases.
Nat Commun, 13, 2022
8APK
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BU of 8apk by Molmil
rotational state 3 of the Trypanosoma brucei mitochondrial ATP synthase dimer
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, 2-{[(4-O-alpha-D-glucopyranosyl-alpha-D-glucopyranosyl)oxy]methyl}-4-{[(3beta,9beta,14beta,17beta,25R)-spirost-5-en-3-yl]oxy}butyl 4-O-alpha-D-glucopyranosyl-alpha-D-glucopyranoside, ...
Authors:Muehleip, A, Gahura, O, Zikova, A, Amunts, A.
Deposit date:2022-08-09
Release date:2022-10-26
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:An ancestral interaction module promotes oligomerization in divergent mitochondrial ATP synthases.
Nat Commun, 13, 2022
6RDL
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BU of 6rdl by Molmil
Cryo-EM structure of Polytomella F-ATP synthase, Rotary substate 1B, monomer-masked refinement
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ASA-10: Polytomella F-ATP synthase associated subunit 10, ...
Authors:Murphy, B.J, Klusch, N, Yildiz, O, Kuhlbrandt, W.
Deposit date:2019-04-12
Release date:2019-07-03
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Rotary substates of mitochondrial ATP synthase reveal the basis of flexible F 1 -F o coupling.
Science, 364, 2019
7UZG
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BU of 7uzg by Molmil
Rat Kidney V-ATPase lacking subunit H, with SidK and NCOA7B, State 1
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATPase H+-transporting V1 subunit A, ATPase H+-transporting V1 subunit D, ...
Authors:Rubinstein, J.L, Abbas, Y.M.
Deposit date:2022-05-09
Release date:2023-11-22
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structure of V-ATPase with NCOA7B
To Be Published
7JG6
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BU of 7jg6 by Molmil
Cryo-EM structure of bedaquiline-free Mycobacterium smegmatis ATP synthase rotational state 2 (backbone model)
Descriptor: ATP synthase epsilon chain, ATP synthase gamma chain, ATP synthase subunit a, ...
Authors:Guo, H, Courbon, G.M, Rubinstein, J.L.
Deposit date:2020-07-18
Release date:2020-08-19
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structure of mycobacterial ATP synthase bound to the tuberculosis drug bedaquiline.
Nature, 589, 2021
7U8P
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BU of 7u8p by Molmil
Structure of porcine kidney V-ATPase with SidK, Rotary State 1
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATPase H(+)-transporting lysosomal accessory protein 2, ATPase H+ transporting accessory protein 1, ...
Authors:Tan, Y.Z, Keon, K.A.
Deposit date:2022-03-09
Release date:2022-07-06
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:CryoEM of endogenous mammalian V-ATPase interacting with the TLDc protein mEAK-7.
Life Sci Alliance, 5, 2022
6VQA
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BU of 6vqa by Molmil
Mammalian V-ATPase from rat brain soluble V1 region rotational state 2 with SidK and ADP (from focused refinement)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATPase H+-transporting V1 subunit A, ATPase H+-transporting V1 subunit D, ...
Authors:Abbas, Y.M, Rubinstein, J.L.
Deposit date:2020-02-04
Release date:2020-03-18
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structure of V-ATPase from the mammalian brain.
Science, 367, 2020
7UNE
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BU of 7une by Molmil
The V1 region of bovine V-ATPase in complex with human mEAK7 (focused refinement)
Descriptor: KIAA1609 protein, isoform CRA_a, V-type proton ATPase catalytic subunit A, ...
Authors:Wang, R, Li, X.
Deposit date:2022-04-10
Release date:2022-06-15
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (3.73 Å)
Cite:Molecular basis of mEAK7-mediated human V-ATPase regulation.
Nat Commun, 13, 2022
6XBY
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BU of 6xby by Molmil
Cryo-EM structure of V-ATPase from bovine brain, state 2
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, 2-acetamido-2-deoxy-beta-D-glucopyranose, ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Wang, R, Li, X.
Deposit date:2020-06-07
Release date:2020-08-19
Method:ELECTRON MICROSCOPY (3.79 Å)
Cite:Cryo-EM structures of intact V-ATPase from bovine brain.
Nat Commun, 11, 2020
6CP3
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BU of 6cp3 by Molmil
Monomer yeast ATP synthase (F1Fo) reconstituted in nanodisc with inhibitor of oligomycin bound.
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase protein 8, ...
Authors:Srivastava, A.P, Luo, M, Symersky, J, Liao, M.F, Mueller, D.M.
Deposit date:2018-03-13
Release date:2018-04-11
Last modified:2020-10-14
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:High-resolution cryo-EM analysis of the yeast ATP synthase in a lipid membrane.
Science, 360, 2018
7TMT
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BU of 7tmt by Molmil
V-ATPase from Saccharomyces cerevisiae, State 3
Descriptor: ADENOSINE-5'-DIPHOSPHATE, H(+)-transporting two-sector ATPase, V-ATPase subunit E, ...
Authors:Vasanthakumar, T, Keon, K.A, Bueler, S.A, Jaskolka, M.C, Rubinstein, J.L.
Deposit date:2022-01-20
Release date:2022-04-20
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Coordinated conformational changes in the V 1 complex during V-ATPase reversible dissociation.
Nat.Struct.Mol.Biol., 29, 2022

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PDB entries from 2024-09-11

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