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9EQ5
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BU of 9eq5 by Molmil
CryoEM Structure of Phenylalanine Ammonia Lyase from Planctomyces brasiliencis
Descriptor: Histidine ammonia-lyase, [(1R)-1-amino-2-phenylethyl]phosphonic acid
Authors:Duhoo, Y, Buslov, I, Desmons, S.
Deposit date:2024-03-20
Release date:2024-08-07
Last modified:2024-10-09
Method:ELECTRON MICROSCOPY (2.17 Å)
Cite:Engineered Phenylalanine Ammonia-Lyases for the Enantioselective Synthesis of Aspartic Acid Derivatives.
Angew.Chem.Int.Ed.Engl., 63, 2024
9ENF
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BU of 9enf by Molmil
Human pseudouridine synthase 3 (PUS3 D118A mutant) and two pre-tRNA-Arg
Descriptor: pre-tRNA-Arg, tRNA pseudouridine(38/39) synthase
Authors:Lin, T.-Y, Jezowski, J, Glatt, S.
Deposit date:2024-03-12
Release date:2024-07-10
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (2.97 Å)
Cite:The molecular basis of tRNA selectivity by human pseudouridine synthase 3.
Mol.Cell, 84, 2024
9C0J
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BU of 9c0j by Molmil
Structure of the elongating DRT2 reverse transcriptase in complex with its non-coding RNA and dNTPs
Descriptor: DRT2 ncRNA, MAGNESIUM ION, POTASSIUM ION, ...
Authors:Wilkinson, M.E, Zhang, F.
Deposit date:2024-05-25
Release date:2024-09-04
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.17 Å)
Cite:Phage-triggered reverse transcription assembles a toxic repetitive gene from a noncoding RNA.
Science, 386, 2024
9F3Z
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BU of 9f3z by Molmil
Psychrophilic laccase (multicopper oxidase) from Oenococcus oeni 229 with Histag
Descriptor: COPPER (II) ION, Multicopper oxidase
Authors:Paredes, F, Casino, P.
Deposit date:2024-04-26
Release date:2024-08-07
Last modified:2024-08-21
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Biochemical and Structural Characterization of a Novel Psychrophilic Laccase (Multicopper Oxidase) Discovered from Oenococcus oeni 229 (ENOLAB 4002).
Int J Mol Sci, 25, 2024
9G13
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BU of 9g13 by Molmil
VHH H3-2 in complex with Tau C-terminal peptide
Descriptor: Isoform Tau-F of Microtubule-associated protein tau, VHH H3-2
Authors:Dupre, E, Landrieu, I, Danis, C, Hanoulle, X, Mortelecque, J.
Deposit date:2024-07-09
Release date:2024-07-31
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:VHH H3-2 in complex with Tau C-terminal peptide
To Be Published
9F7W
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BU of 9f7w by Molmil
Humman PPARgamma ligand binding domain in complex with co-activator 1alpha peptide and bisphenol A (BPA)
Descriptor: 4,4'-PROPANE-2,2-DIYLDIPHENOL, Peroxisome proliferator-activated receptor gamma, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha
Authors:Useini, A, Strater, N.
Deposit date:2024-05-05
Release date:2024-07-10
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Structural Studies on the Binding Mode of Bisphenols to PPAR gamma.
Biomolecules, 14, 2024
9EO6
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BU of 9eo6 by Molmil
SARS-CoV2 major protease in complex with a covalent inhibitor SLL11.
Descriptor: 3C-like proteinase nsp5, Inhibitor SLL11, POTASSIUM ION
Authors:Moche, M, Lennerstrand, J, Nyman, T, Strandback, E, Akaberi, D.
Deposit date:2024-03-14
Release date:2024-09-04
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Identification of novel and potent inhibitors of SARS-CoV-2 main protease from DNA-encoded chemical libraries.
Antimicrob.Agents Chemother., 68, 2024
9G2A
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BU of 9g2a by Molmil
Staphylococcus aureus MazF in complex with nanobody 4
Descriptor: 3[N-MORPHOLINO]PROPANE SULFONIC ACID, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Endoribonuclease MazF, ...
Authors:Prolic-Kalinsek, M, Zorzini, V, Haesaerts, S, Loris, R.
Deposit date:2024-07-10
Release date:2024-07-17
Last modified:2024-07-24
Method:X-RAY DIFFRACTION (2.046594 Å)
Cite:Staphylococcus aureus MazF in complex with nanobody 4.
To Be Published
9BDX
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BU of 9bdx by Molmil
NF-kappaB RelA homo-dimer bound to CG-centric kappaB DNA
Descriptor: DNA (5'-D(*AP*TP*CP*AP*CP*TP*GP*GP*AP*AP*GP*TP*TP*CP*CP*CP*AP*GP*T)-3'), DNA (5'-D(P*AP*CP*TP*GP*GP*GP*AP*AP*CP*TP*TP*CP*CP*AP*GP*TP*GP*AP*T)-3'), Transcription factor p65
Authors:Biswas, T, Shahabi, S, Tsodikov, O.V, Ghosh, G.
Deposit date:2024-04-12
Release date:2024-04-24
Last modified:2024-06-12
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Transient interactions modulate the affinity of NF-kappa B transcription factors for DNA.
Proc.Natl.Acad.Sci.USA, 121, 2024
9C7U
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BU of 9c7u by Molmil
Structure of the human truncated BOS complex in GDN
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, BOS complex subunit NOMO2, Nicalin, ...
Authors:Nguyen, V.N, Tomaleri, G.P, Voorhees, R.M.
Deposit date:2024-06-11
Release date:2024-08-21
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.65 Å)
Cite:Role of a holo-insertase complex in the biogenesis of biophysically diverse ER membrane proteins.
Mol.Cell, 84, 2024
9BF6
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BU of 9bf6 by Molmil
Cryo-EM structure of the HIV-1 WITO IDL Env trimer in complex with PGT122 Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein gp120, Envelope glycoprotein gp41, ...
Authors:Gorman, J, Kwong, P.D.
Deposit date:2024-04-16
Release date:2024-07-31
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Design of soluble HIV-1 envelope trimers free of covalent gp120-gp41 bonds with prevalent native-like conformation.
Cell Rep, 43, 2024
9C9R
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BU of 9c9r by Molmil
Crystal structure of Chaetomium thermophilum Gcn2 HisRS-like domain, F1090C/G1326S variant
Descriptor: non-specific serine/threonine protein kinase
Authors:Bou-Nader, C, Bahmanjah, S, Zhang, J.
Deposit date:2024-06-14
Release date:2024-08-21
Last modified:2024-09-18
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:Gcn2 structurally mimics and functionally repurposes the HisRS enzyme for the integrated stress response.
Proc.Natl.Acad.Sci.USA, 121, 2024
9DK4
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BU of 9dk4 by Molmil
ancestral hydroxynitrile lyase with fifteen substitutions
Descriptor: Fifteen-substitution variant of an ancestral hydroxynitrile lyase, SODIUM ION
Authors:Sarak, S.C, Tan, P, Evans III, R.L, Shi, K, Kazlauskas, R.J, Aihara, H, Pierce, C.T, Walsh, M.E, Greenberg, L.R.
Deposit date:2024-09-07
Release date:2024-10-02
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:To be published
To Be Published
6WTS
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BU of 6wts by Molmil
CryoEM structure of the C. sordellii lethal toxin TcsL in complex with SEMA6A
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, SEMA6A, ...
Authors:Kucharska, I, Rubinstein, J.L, Julien, J.P.
Deposit date:2020-05-03
Release date:2020-07-08
Last modified:2024-10-09
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Recognition of Semaphorin Proteins by P. sordellii Lethal Toxin Reveals Principles of Receptor Specificity in Clostridial Toxins.
Cell, 182, 2020
9CYS
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BU of 9cys by Molmil
Toxin/immunity complex for a T6SS lipase effector from E. cloacae
Descriptor: Ankyrin repeat domain-containing protein, CITRIC ACID, GLYCEROL, ...
Authors:Cuthbert, B.J, Jensen, S.J, Goulding, C.W, Hayes, C.S.
Deposit date:2024-08-02
Release date:2024-08-14
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Advanced glycation end-product crosslinking activates a type VI secretion system phospholipase effector protein.
Nat Commun, 15, 2024
9FYO
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BU of 9fyo by Molmil
Lacto-N-biosidase from Trueperella pyogenes
Descriptor: NICKEL (II) ION, TrpyGH20, beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Vuillemin, M, Siebenhaar, S, Zeuner, B, Morth, J.P.
Deposit date:2024-07-03
Release date:2024-10-09
Method:X-RAY DIFFRACTION (2.77 Å)
Cite:Discovery of Lacto-N-biosidases and a Novel N-Acetyllactosaminidase Activity in the CAZy Family GH20: Functional Diversity and Structural Insights.
Chembiochem, 2024
9DNA
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BU of 9dna by Molmil
CRYSTAL STRUCTURE ANALYSIS OF AN A-DNA FRAGMENT AT 1.8 ANGSTROMS RESOLUTION. D(GCCCGGGC)
Descriptor: DNA (5'-D(*GP*CP*CP*CP*GP*GP*GP*C)-3')
Authors:Heinemann, U.
Deposit date:1987-07-10
Release date:1988-01-16
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure analysis of an A-DNA fragment at 1.8 A resolution: d(GCCCGGGC).
Nucleic Acids Res., 15, 1987
9CJ8
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BU of 9cj8 by Molmil
Lineage IV Lassa virus glycoprotein (Josiah) in complex with rabbit polyclonal antibody (LAVA01-like epitope)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Brouwer, P.J.M, Perrett, H.R, Ward, A.B.
Deposit date:2024-07-05
Release date:2024-09-25
Last modified:2024-10-09
Method:ELECTRON MICROSCOPY (3.74 Å)
Cite:Defining bottlenecks and opportunities for Lassa virus neutralization by structural profiling of vaccine-induced polyclonal antibody responses.
Cell Rep, 43, 2024
9F44
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BU of 9f44 by Molmil
cryo-EM structure of LST2 TOS peptide bound to human mTOR complex 1
Descriptor: INOSITOL HEXAKISPHOSPHATE, Lateral signaling target protein 2 homolog, Regulatory-associated protein of mTOR, ...
Authors:Craigie, L.M, Maier, T.
Deposit date:2024-04-26
Release date:2024-08-14
Last modified:2024-08-28
Method:ELECTRON MICROSCOPY (3.68 Å)
Cite:mTORC1 phosphorylates and stabilizes LST2 to negatively regulate EGFR.
Proc.Natl.Acad.Sci.USA, 121, 2024
9G7K
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BU of 9g7k by Molmil
Staphylococcus aureus MazF in complex with Nanobody 12
Descriptor: CHLORIDE ION, Endoribonuclease MazF, Nanobody 12, ...
Authors:Zorzini, V, Haesaerts, S, Loris, R.
Deposit date:2024-07-21
Release date:2024-07-31
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.086874 Å)
Cite:Nanobody-mediated activation and inhibition of Staphylococcus aureus MazF
To Be Published
9C4O
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BU of 9c4o by Molmil
Cryo-EM structure of PqqU with ligand PQQ
Descriptor: CALCIUM ION, PYRROLOQUINOLINE QUINONE, Pyrroloquinoline quinone transporter
Authors:Munder, F, Venugopal, H, Grinter, R.
Deposit date:2024-06-04
Release date:2024-06-19
Method:ELECTRON MICROSCOPY (1.99 Å)
Cite:High-affinity PQQ import is widespread in Gram-negative bacteria.
To Be Published
9EOX
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BU of 9eox by Molmil
SARS-CoV2 major protease in covalent complex with a soluble inhibitor.
Descriptor: 3C-like proteinase nsp5, POTASSIUM ION, Soluble inhibitor
Authors:Moche, M, Lennerstrand, J, Nyman, T, Strandback, E, Akaberi, D.
Deposit date:2024-03-15
Release date:2024-09-04
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.54 Å)
Cite:Identification of novel and potent inhibitors of SARS-CoV-2 main protease from DNA-encoded chemical libraries.
Antimicrob.Agents Chemother., 68, 2024
9GAC
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BU of 9gac by Molmil
PRECURSOR OF THE T152C MUTANT GLYCOSYLASPARAGINASE FROM FLAVOBACTERIUM MENINGOSEPTICUM
Descriptor: GLYCINE, PROTEIN (GLYCOSYLASPARAGINASE)
Authors:Guo, H.-C, Xu, Q.
Deposit date:1999-06-15
Release date:2000-06-16
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural insights into the mechanism of intramolecular proteolysis.
Cell(Cambridge,Mass.), 98, 1999
3BYN
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BU of 3byn by Molmil
Crystal structure of B. subtilis levansucrase mutant E342A bound to raffinose
Descriptor: CALCIUM ION, Levansucrase, alpha-D-galactopyranose-(1-6)-alpha-D-glucopyranose-(1-2)-beta-D-fructofuranose
Authors:Futterer, K, Meng, G.
Deposit date:2008-01-16
Release date:2008-02-12
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Donor substrate recognition in the raffinose-bound E342A mutant of fructosyltransferase Bacillus subtilis levansucrase
To be Published
9BDL
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BU of 9bdl by Molmil
80S ribosome with angiogenin
Descriptor: 18S rRNA, 28S rRNA, 40S ribosomal protein S10, ...
Authors:Loveland, A.B, Korostelev, A.A.
Deposit date:2024-04-12
Release date:2024-07-24
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Structural mechanism of angiogenin activation by the ribosome.
Nature, 630, 2024

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PDB entries from 2024-10-30

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