Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 122 results

5AVH
DownloadVisualize
BU of 5avh by Molmil
The 0.90 angstrom structure (I222) of glucose isomerase crystallized in high-strength agarose hydrogel
Descriptor: Xylose isomerase
Authors:Sugiyama, S, Shimizu, N, Maruyama, N, Sazaki, G, Adachi, H, Takano, K, Murakami, S, Inoue, T, Mori, Y, Matsumura, H.
Deposit date:2015-06-16
Release date:2015-07-08
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (0.9 Å)
Cite:Growth of protein crystals in hydrogels prevents osmotic shock
J.Am.Chem.Soc., 134, 2012
2GLK
DownloadVisualize
BU of 2glk by Molmil
High-resolution study of D-Xylose isomerase, 0.94A resolution.
Descriptor: GLYCEROL, MANGANESE (II) ION, Xylose isomerase
Authors:Katz, A.K, Carrell, H.L, Hanson, B.L, Harp, J.M, Glusker, J.P, Bunick, G.J.
Deposit date:2006-04-05
Release date:2006-05-16
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (0.94 Å)
Cite:Locating active-site hydrogen atoms in D-xylose isomerase: Time-of-flight neutron diffraction.
Proc.Natl.Acad.Sci.Usa, 103, 2006
4A8I
DownloadVisualize
BU of 4a8i by Molmil
Protein crystallization and microgravity: glucose isomerase crystals grown during the PCDF-PROTEIN mission
Descriptor: 1,2-ETHANEDIOL, COBALT (II) ION, XYLOSE ISOMERASE
Authors:Decanniere, K, Patino-Lopez, L.-D, Sleutel, M, Evrard, C, Van De Weerdt, C, Haumont, E, Gavira, J.A, Otalora, F, Maes, D.
Deposit date:2011-11-21
Release date:2011-11-30
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (0.95 Å)
Cite:Protein Crystallization and Microgravity: Glucose Isomerase Crystals Grown During the Pcdf-Protein Mission
To be Published
3U3H
DownloadVisualize
BU of 3u3h by Molmil
X-Ray Crystallographic Analysis of D-Xylose Isomerase-Catalyzed Isomerization of (R)-Glyceraldehyde
Descriptor: (2R)-propane-1,1,2,3-tetrol, (4R)-2-METHYLPENTANE-2,4-DIOL, FORMIC ACID, ...
Authors:Allen, K.N, Silvaggi, N.R, Toteva, M.M, Richard, J.P.
Deposit date:2011-10-05
Release date:2011-10-26
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (0.97 Å)
Cite:Binding Energy and Catalysis by d-Xylose Isomerase: Kinetic, Product, and X-ray Crystallographic Analysis of Enzyme-Catalyzed Isomerization of (R)-Glyceraldehyde.
Biochemistry, 50, 2011
7DMM
DownloadVisualize
BU of 7dmm by Molmil
Structure of a glucose isomerase crystal grown in an aqueous glycerol solution without any precipitants
Descriptor: CALCIUM ION, GLYCEROL, MANGANESE (II) ION, ...
Authors:Suzuki, Y, Maita, N.
Deposit date:2020-12-04
Release date:2021-12-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (0.99 Å)
Cite:Extraordinarily fast growth of high-quality glucose isomerase crystals simply by concentration in a precipitant-free solution with a cryoprotectant
To be published
8WDG
DownloadVisualize
BU of 8wdg by Molmil
Subatomic crystal structure of glucose isomerase from Streptomyces rubiginosus
Descriptor: MAGNESIUM ION, Xylitol, Xylose isomerase
Authors:Nam, K.H.
Deposit date:2023-09-15
Release date:2023-10-04
Last modified:2024-04-17
Method:X-RAY DIFFRACTION (0.99 Å)
Cite:Xylitol binding to the M1 site of glucose isomerase induces a conformational change in the substrate binding channel.
Biochem.Biophys.Res.Commun., 682, 2023
1MNZ
DownloadVisualize
BU of 1mnz by Molmil
Atomic structure of Glucose isomerase
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, ...
Authors:Nowak, E, Panjikar, S, Tucker, P.A.
Deposit date:2002-09-06
Release date:2002-09-25
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (0.99 Å)
Cite:Atomic structure of Glucose isomerase
To be published
5AVN
DownloadVisualize
BU of 5avn by Molmil
The 1.03 angstrom structure (P212121) of glucose isomerase crystallized in high-strength agarose hydrogel
Descriptor: CALCIUM ION, MANGANESE (II) ION, SULFATE ION, ...
Authors:Sugiyama, S, Shimizu, N, Maruyama, N, Sazaki, G, Adachi, H, Takano, K, Murakami, S, Inoue, T, Mori, Y, Matsumura, H.
Deposit date:2015-06-23
Release date:2015-07-08
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.03 Å)
Cite:Growth of protein crystals in hydrogels prevents osmotic shock
J.Am.Chem.Soc., 134, 2012
6YBO
DownloadVisualize
BU of 6ybo by Molmil
RT structure of Glucose Isomerase obtained at 1.06 A resolution from crystal grown in a Kapton microchip.
Descriptor: MAGNESIUM ION, SODIUM ION, Xylose isomerase
Authors:Gavira, J.A, Martinez-Rodriguez, S.
Deposit date:2020-03-17
Release date:2020-08-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.06 Å)
Cite:Attaining atomic resolution from in situ data collection at room temperature using counter-diffusion-based low-cost microchips.
Acta Crystallogr D Struct Biol, 76, 2020
6QRR
DownloadVisualize
BU of 6qrr by Molmil
X-ray radiation dose series on xylose isomerase - 0.13 MGy
Descriptor: 1,2-ETHANEDIOL, ISOPROPYL ALCOHOL, MAGNESIUM ION, ...
Authors:Taberman, H, Bury, C.S, van der Woerd, M.J, Snell, E.H, Garman, E.F.
Deposit date:2019-02-19
Release date:2019-07-17
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.096 Å)
Cite:Structural knowledge or X-ray damage? A case study on xylose isomerase illustrating both.
J.Synchrotron Radiat., 26, 2019
6QRU
DownloadVisualize
BU of 6qru by Molmil
X-ray radiation dose series on xylose isomerase - 2.01 MGy
Descriptor: 1,2-ETHANEDIOL, ISOPROPYL ALCOHOL, MAGNESIUM ION, ...
Authors:Taberman, H, Bury, C.S, van der Woerd, M.J, Snell, E.H, Garman, E.F.
Deposit date:2019-02-19
Release date:2019-07-17
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.17 Å)
Cite:Structural knowledge or X-ray damage? A case study on xylose isomerase illustrating both.
J.Synchrotron Radiat., 26, 2019
6QRY
DownloadVisualize
BU of 6qry by Molmil
X-ray radiation dose series on xylose isomerase - merged data
Descriptor: 1,2-ETHANEDIOL, ISOPROPYL ALCOHOL, MAGNESIUM ION, ...
Authors:Taberman, H, Bury, C.S, van der Woerd, M.J, Snell, E.H, Garman, E.F.
Deposit date:2019-02-19
Release date:2019-07-17
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.17 Å)
Cite:Structural knowledge or X-ray damage? A case study on xylose isomerase illustrating both.
J.Synchrotron Radiat., 26, 2019
6QRT
DownloadVisualize
BU of 6qrt by Molmil
X-ray radiation dose series on xylose isomerase - 1.38 MGy
Descriptor: 1,2-ETHANEDIOL, ISOPROPYL ALCOHOL, MAGNESIUM ION, ...
Authors:Taberman, H, Bury, C.S, van der Woerd, M.J, Snell, E.H, Garman, E.F.
Deposit date:2019-02-19
Release date:2019-07-17
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.17 Å)
Cite:Structural knowledge or X-ray damage? A case study on xylose isomerase illustrating both.
J.Synchrotron Radiat., 26, 2019
6QRV
DownloadVisualize
BU of 6qrv by Molmil
X-ray radiation dose series on xylose isomerase - 2.63 MGy
Descriptor: 1,2-ETHANEDIOL, ISOPROPYL ALCOHOL, MAGNESIUM ION, ...
Authors:Taberman, H, Bury, C.S, van der Woerd, M.J, Snell, E.H, Garman, E.F.
Deposit date:2019-02-19
Release date:2019-07-17
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.17 Å)
Cite:Structural knowledge or X-ray damage? A case study on xylose isomerase illustrating both.
J.Synchrotron Radiat., 26, 2019
6QRW
DownloadVisualize
BU of 6qrw by Molmil
X-ray radiation dose series on xylose isomerase - 3.25 MGy
Descriptor: 1,2-ETHANEDIOL, ISOPROPYL ALCOHOL, MAGNESIUM ION, ...
Authors:Taberman, H, Bury, C.S, van der Woerd, M.J, Snell, E.H, Garman, E.F.
Deposit date:2019-02-19
Release date:2019-07-17
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.17 Å)
Cite:Structural knowledge or X-ray damage? A case study on xylose isomerase illustrating both.
J.Synchrotron Radiat., 26, 2019
6QRS
DownloadVisualize
BU of 6qrs by Molmil
X-ray radiation dose series on xylose isomerase - 0.13 MGy
Descriptor: 1,2-ETHANEDIOL, ISOPROPYL ALCOHOL, MAGNESIUM ION, ...
Authors:Taberman, H, Bury, C.S, van der Woerd, M.J, Snell, E.H, Garman, E.F.
Deposit date:2019-02-19
Release date:2019-07-17
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.17 Å)
Cite:Structural knowledge or X-ray damage? A case study on xylose isomerase illustrating both.
J.Synchrotron Radiat., 26, 2019
6QRX
DownloadVisualize
BU of 6qrx by Molmil
X-ray radiation dose series on xylose isomerase - 3.88 MGy
Descriptor: 1,2-ETHANEDIOL, ISOPROPYL ALCOHOL, MAGNESIUM ION, ...
Authors:Taberman, H, Bury, C.S, van der Woerd, M.J, Snell, E.H, Garman, E.F.
Deposit date:2019-02-19
Release date:2019-07-17
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.17 Å)
Cite:Structural knowledge or X-ray damage? A case study on xylose isomerase illustrating both.
J.Synchrotron Radiat., 26, 2019
6QUF
DownloadVisualize
BU of 6quf by Molmil
Protein crystallization by ionic liquid hydrogel support: reference crystal of glucose isomerase grown on standard silanized glass
Descriptor: GLYCEROL, MANGANESE (II) ION, SULFATE ION, ...
Authors:Belviso, B.D, Caliandro, R, Caliandro, R.
Deposit date:2019-02-27
Release date:2019-03-13
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.19 Å)
Cite:Protein Crystallization in Ionic-Liquid Hydrogel Composite Membranes
Crystals, 9, 2019
4US6
DownloadVisualize
BU of 4us6 by Molmil
New Crystal Form of Glucose Isomerase Grown in Short Peptide Supramolecular Hydrogels
Descriptor: CALCIUM ION, GLYCEROL, MAGNESIUM ION, ...
Authors:Gavira, J.A, Conejero-Muriel, M, Diaz-Mochon, J.J, Alvarez de Cienfuegos, L.
Deposit date:2014-07-03
Release date:2015-05-13
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Influence of the Chirality of Short Peptide Supramolecular Hydrogels in Protein Crystallogenesis.
Chem.Commun.(Camb.), 51, 2015
6YBR
DownloadVisualize
BU of 6ybr by Molmil
RT structure of Glucose Isomerase obtained at 1.20 A resolution from crystal grown in a Mylar microchip.
Descriptor: MAGNESIUM ION, SODIUM ION, Xylose isomerase
Authors:Gavira, J.A, Martinez-Rodriguez, S.
Deposit date:2020-03-17
Release date:2020-08-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Attaining atomic resolution from in situ data collection at room temperature using counter-diffusion-based low-cost microchips.
Acta Crystallogr D Struct Biol, 76, 2020
4A8N
DownloadVisualize
BU of 4a8n by Molmil
Protein crystallization and microgravity: glucose isomerase crystals grown during the PCDF-PROTEIN mission
Descriptor: COBALT (II) ION, GLYCEROL, XYLOSE ISOMERASE
Authors:Decanniere, K, Patino-Lopez, L.-D, Sleutel, M, Evrard, C, Van De Weerdt, C, Haumont, E, Gavira, J.A, Otalora, F, Maes, D.
Deposit date:2011-11-21
Release date:2012-02-29
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Protein Crystallization and Microgravity: Glucose Isomerase Crystals Grown During the Pcdf-Protein Mission
To be Published
5I7G
DownloadVisualize
BU of 5i7g by Molmil
Metal free Glucose Isomerase collected at room temperature using the HC1b humidity controller
Descriptor: Xylose isomerase
Authors:Sandy, J.
Deposit date:2016-02-17
Release date:2016-02-24
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.21 Å)
Cite:Metal free Glucose Isomerase collected at room temperature using the HC1b humidity controller
To Be Published
4A8L
DownloadVisualize
BU of 4a8l by Molmil
Protein crystallization and microgravity: glucose isomerase crystals grown during the PCDF-PROTEIN mission
Descriptor: 1,2-ETHANEDIOL, COBALT (II) ION, XYLOSE ISOMERASE
Authors:Decanniere, K, Patino-Lopez, L.-D, Sleutel, M, Evrard, C, Van De Weerdt, C, Haumont, E, Gavira, J.A, Otalora, F, Maes, D.
Deposit date:2011-11-21
Release date:2011-11-30
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Protein Crystallization and Microgravity: Glucose Isomerase Crystals Grown During the Pcdf-Protein Mission
To be Published
1O1H
DownloadVisualize
BU of 1o1h by Molmil
STRUCTURE OF GLUCOSE ISOMERASE DERIVATIZED WITH KR.
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, ...
Authors:Nowak, E, Panjikar, S, Tucker, P.A.
Deposit date:2002-11-07
Release date:2002-11-27
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structure of Glucose Isomerase Derivatized with Kr.
To be Published
5ZYE
DownloadVisualize
BU of 5zye by Molmil
Crystal Structure of Glucose Isomerase Soaked with Mn2+ and Glucose
Descriptor: MANGANESE (II) ION, Xylose isomerase, alpha-D-glucopyranose
Authors:Nam, K.H.
Deposit date:2018-05-24
Release date:2018-11-28
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural analysis of substrate recognition by glucose isomerase in Mn2+binding mode at M2 site in S. rubiginosus
Biochem. Biophys. Res. Commun., 503, 2018

223790

PDB entries from 2024-08-14

PDB statisticsPDBj update infoContact PDBjnumon