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PDB: 162 results

4FUV
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BU of 4fuv by Molmil
Crystal Structure of Acinetobacter baumannii CarO
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, SULFATE ION, porin protein associated with imipenem resistance
Authors:Eren, E, van den Berg, B.
Deposit date:2012-06-28
Release date:2013-07-10
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.151 Å)
Cite:Outer membrane transport of amino acids and antibiotics by an 8-stranded b-barrel protein
To be Published
4FRX
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Crystal Structure of Pseudomonas aeruginosa OccK8 (OprE)
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, Anaerobically-induced outer membrane porin OprE
Authors:Eren, E, van den Berg, B.
Deposit date:2012-06-26
Release date:2013-07-24
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structures of OccK Subfamily Proteins
To be Published
8BMZ
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BU of 8bmz by Molmil
Bacteroides thetaiotaomicron surface lipoprotein BT1954 bound to adenosylcobalamin
Descriptor: Adenosylcobalamin, CHLORIDE ION, Putative surface layer protein, ...
Authors:Abellon-Ruiz, J, Jana, K, Silale, A, Basle, A, Kleinekathofer, U, van den Berg, B.
Deposit date:2022-11-11
Release date:2023-08-16
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:BtuB TonB-dependent transporters and BtuG surface lipoproteins form stable complexes for vitamin B 12 uptake in gut Bacteroides.
Nat Commun, 14, 2023
8BMY
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BU of 8bmy by Molmil
Bacteroides thetaiotaomicron surface lipoprotein bound to cyanocobalamin
Descriptor: CHLORIDE ION, CYANOCOBALAMIN, Putative surface layer protein, ...
Authors:Abellon-Ruiz, J, Jana, K, Silale, A, Basle, A, Kleinekathofer, U, van den Berg, B.
Deposit date:2022-11-11
Release date:2023-08-16
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:BtuB TonB-dependent transporters and BtuG surface lipoproteins form stable complexes for vitamin B 12 uptake in gut Bacteroides.
Nat Commun, 14, 2023
8BLW
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BU of 8blw by Molmil
Vitamin B12 transporter BtuB1 with lipoprotein BtuG1 from B. theta
Descriptor: Vitamin B12 transporter BtuB1, YncE family protein, beta-D-galactopyranose
Authors:Silale, A, Abellon-Ruiz, J, van den Berg, B.
Deposit date:2022-11-10
Release date:2023-08-16
Method:ELECTRON MICROSCOPY (3.22 Å)
Cite:BtuB TonB-dependent transporters and BtuG surface lipoproteins form stable complexes for vitamin B 12 uptake in gut Bacteroides.
Nat Commun, 14, 2023
8BN0
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BU of 8bn0 by Molmil
Bacteroides thetaiotaomicron surface protein BT1954 bound to
Descriptor: CHLORIDE ION, COB(II)INAMIDE, CYANIDE ION, ...
Authors:Abellon-Ruiz, J, Jana, K, Silale, A, Basle, A, Kleinekathofer, U, van den Berg, B.
Deposit date:2022-11-11
Release date:2023-08-16
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.33 Å)
Cite:BtuB TonB-dependent transporters and BtuG surface lipoproteins form stable complexes for vitamin B 12 uptake in gut Bacteroides.
Nat Commun, 14, 2023
4FSO
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BU of 4fso by Molmil
Crystal Structure of Pseudomonas aeruginosa OccK10 (OpdN)
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, CALCIUM ION, Probable porin
Authors:Eren, E, van den Berg, B.
Deposit date:2012-06-27
Release date:2013-07-24
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Crystal Structures of OccK Subfamily Proteins
To be Published
4FSP
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BU of 4fsp by Molmil
Crystal Structure of Pseudomonas aeruginosa OccK11 (OpdR)
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, Probable porin
Authors:Eren, E, van den Berg, B.
Deposit date:2012-06-27
Release date:2013-07-24
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.323 Å)
Cite:Crystal Structures of OccK Subfamily Proteins
To be Published
4FT6
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BU of 4ft6 by Molmil
Crystal Structure of Pseudomonas aeruginosa OccK9 (OpdG)
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, DECYL-BETA-D-MALTOPYRANOSIDE, Probable porin
Authors:Eren, E, van den Berg, B.
Deposit date:2012-06-27
Release date:2013-07-24
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.603 Å)
Cite:Crystal Structures of OccK Subfamily Proteins
To be Published
8BYM
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BU of 8bym by Molmil
Outer membrane attachment porin OmpM1 from Veillonella parvula
Descriptor: S-layer homology domain-containing protein
Authors:Silale, A, van den Berg, B.
Deposit date:2022-12-13
Release date:2023-11-08
Last modified:2023-12-27
Method:ELECTRON MICROSCOPY (3.15 Å)
Cite:Dual function of OmpM as outer membrane tether and nutrient uptake channel in diderm Firmicutes.
Nat Commun, 14, 2023
8BYT
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BU of 8byt by Molmil
Outer membrane attachment porin OmpM1 from Veillonella parvula, C3 symmetry
Descriptor: S-layer homology domain-containing protein
Authors:Silale, A, van den Berg, B.
Deposit date:2022-12-13
Release date:2023-11-08
Last modified:2023-12-27
Method:ELECTRON MICROSCOPY (2.78 Å)
Cite:Dual function of OmpM as outer membrane tether and nutrient uptake channel in diderm Firmicutes.
Nat Commun, 14, 2023
8BYS
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BU of 8bys by Molmil
Outer membrane attachment porin OmpM1 from Veillonella parvula, native
Descriptor: S-layer homology domain-containing protein
Authors:Silale, A, van den Berg, B.
Deposit date:2022-12-13
Release date:2023-11-08
Last modified:2023-12-27
Method:ELECTRON MICROSCOPY (3.28 Å)
Cite:Dual function of OmpM as outer membrane tether and nutrient uptake channel in diderm Firmicutes.
Nat Commun, 14, 2023
8BZ2
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BU of 8bz2 by Molmil
Crystal structure of outer membrane attachment porin OmpM1 SLH domain
Descriptor: S-layer homology domain-containing protein, SULFATE ION
Authors:Silale, A, van den Berg, B.
Deposit date:2022-12-14
Release date:2023-11-08
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Dual function of OmpM as outer membrane tether and nutrient uptake channel in diderm Firmicutes.
Nat Commun, 14, 2023
4FOZ
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BU of 4foz by Molmil
Crystal Structure of OccD1 (OprD) Y282R/D307H
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, Porin D
Authors:Eren, E, van den Berg, B.
Deposit date:2012-06-21
Release date:2013-03-13
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Toward Understanding the Outer Membrane Uptake of Small Molecules by Pseudomonas aeruginosa.
J.Biol.Chem., 288, 2013
4FRT
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BU of 4frt by Molmil
Crystal Structure of Pseudomonas aeruginosa OccK7 (OpdD)
Descriptor: Probable porin
Authors:Eren, E, van den Berg, B.
Deposit date:2012-06-26
Release date:2013-07-24
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.166 Å)
Cite:Crystal Structures of OccK Subfamily Proteins
To be Published
7VTZ
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BU of 7vtz by Molmil
Chitoporin from Escherichia coli
Descriptor: Chitoporin, DODECYL-BETA-D-MALTOSIDE, PLATINUM (II) ION
Authors:Amornloetwattana, R, Soysa, H.S.M, Suginta, W, van den Berg, B.
Deposit date:2021-11-01
Release date:2022-11-09
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of chitoporin from Escherichia coli
To Be Published
4KAX
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BU of 4kax by Molmil
Crystal structure of the Grp1 PH domain in complex with Arf6-GTP
Descriptor: ADP-ribosylation factor 6, CITRIC ACID, Cytohesin-3, ...
Authors:Lambright, D.G, Malaby, A.W, van den Berg, B.
Deposit date:2013-04-23
Release date:2013-08-14
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural basis for membrane recruitment and allosteric activation of cytohesin family Arf GTPase exchange factors.
Proc.Natl.Acad.Sci.USA, 110, 2013
1TLW
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BU of 1tlw by Molmil
Tsx structure complexed with thymidine
Descriptor: Nucleoside-specific channel-forming protein tsx, THYMIDINE
Authors:Ye, J, van den Berg, B.
Deposit date:2004-06-10
Release date:2004-08-24
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Crystal structure of the bacterial nucleoside transporter Tsx.
Embo J., 23, 2004
1TLZ
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BU of 1tlz by Molmil
Tsx structure complexed with uridine
Descriptor: Nucleoside-specific channel-forming protein tsx, URIDINE
Authors:Ye, J, van den Berg, B.
Deposit date:2004-06-10
Release date:2004-08-24
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Crystal structure of the bacterial nucleoside transporter Tsx.
Embo J., 23, 2004
1TLY
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BU of 1tly by Molmil
Tsx structure
Descriptor: Nucleoside-specific channel-forming protein tsx
Authors:Ye, J, van den Berg, B.
Deposit date:2004-06-10
Release date:2004-08-24
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3.01 Å)
Cite:Crystal structure of the bacterial nucleoside transporter Tsx.
Embo J., 23, 2004
3BS0
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BU of 3bs0 by Molmil
Crystal structure of the P. putida toluene transporter TodX
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, TodX
Authors:Hearn, E.M, Patel, D.R, van den Berg, B.
Deposit date:2007-12-21
Release date:2008-06-10
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Outer-membrane transport of aromatic hydrocarbons as a first step in biodegradation.
Proc.Natl.Acad.Sci.Usa, 105, 2008
2F1C
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BU of 2f1c by Molmil
Crystal structure of the monomeric porin OmpG
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, Outer membrane protein G
Authors:Subbarao, G.V, van den Berg, B.
Deposit date:2005-11-14
Release date:2006-06-27
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structure of the Monomeric Porin OmpG.
J.Mol.Biol., 360, 2006
2R4P
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BU of 2r4p by Molmil
Crystal structure of the long-chain fatty acid transporter FadL mutant G212E
Descriptor: LAURYL DIMETHYLAMINE-N-OXIDE, Long-chain fatty acid transport protein
Authors:Hearn, E.M, Patel, D.R, Lepore, B.W, Indic, M, van den Berg, B.
Deposit date:2007-08-31
Release date:2008-09-16
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Transmembrane passage of hydrophobic compounds through a protein channel wall
Nature, 458, 2009
2R4O
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BU of 2r4o by Molmil
Crystal structure of the long-chain fatty acid transporter FadL mutant delta NPA
Descriptor: LAURYL DIMETHYLAMINE-N-OXIDE, Long-chain fatty acid transport protein
Authors:Hearn, E.M, Patel, D.R, Lepore, B.W, Indic, M, van den Berg, B.
Deposit date:2007-08-31
Release date:2008-09-16
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Transmembrane passage of hydrophobic compounds through a protein channel wall
Nature, 458, 2009
2R8A
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BU of 2r8a by Molmil
Crystal structure of the long-chain fatty acid transporter FadL mutant delta N8
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, Long-chain fatty acid transport protein
Authors:Hearn, E.M, Patel, D.R, Lepore, B.W, Indic, M, van den Berg, B.
Deposit date:2007-09-10
Release date:2008-09-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3 Å)
Cite:From the Cover: Ligand-gated diffusion across the bacterial outer membrane.
Proc.Natl.Acad.Sci.USA, 108, 2011

225946

數據於2024-10-09公開中

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